Miyakogusa Predicted Gene

Lj0g3v0080839.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0080839.1 Non Chatacterized Hit- tr|I3T2G7|I3T2G7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.14,0,Alpha-L
RNA-binding motif,NULL; 40S RIBOSOMAL PROTEIN S9,NULL; 30S 40S
RIBOSOMAL PROTEIN,Ribosomal p,CUFF.4190.1
         (116 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g10710.1                                                       201   1e-52
Glyma05g01180.1                                                       201   1e-52
Glyma06g20540.1                                                       197   2e-51
Glyma04g33900.1                                                       197   2e-51
Glyma04g33900.2                                                       161   1e-40

>Glyma17g10710.1 
          Length = 197

 Score =  201 bits (512), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 98/98 (100%), Positives = 98/98 (100%)

Query: 1   MFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQ 60
           MFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQ
Sbjct: 82  MFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQ 141

Query: 61  VVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKNQ 98
           VVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKNQ
Sbjct: 142 VVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKNQ 179


>Glyma05g01180.1 
          Length = 197

 Score =  201 bits (512), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 98/98 (100%), Positives = 98/98 (100%)

Query: 1   MFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQ 60
           MFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQ
Sbjct: 82  MFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQ 141

Query: 61  VVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKNQ 98
           VVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKNQ
Sbjct: 142 VVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKNQ 179


>Glyma06g20540.1 
          Length = 197

 Score =  197 bits (501), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 95/98 (96%), Positives = 98/98 (100%)

Query: 1   MFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQ 60
           MFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLI+QRHIRVGRQ
Sbjct: 82  MFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIKQRHIRVGRQ 141

Query: 61  VVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKNQ 98
           VVNIPSF+VRVDSQKHIDFSLTSPLGGGRPGRVKR+NQ
Sbjct: 142 VVNIPSFLVRVDSQKHIDFSLTSPLGGGRPGRVKRRNQ 179


>Glyma04g33900.1 
          Length = 197

 Score =  197 bits (501), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 95/98 (96%), Positives = 98/98 (100%)

Query: 1   MFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQ 60
           MFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLI+QRHIRVGRQ
Sbjct: 82  MFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIKQRHIRVGRQ 141

Query: 61  VVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKNQ 98
           VVNIPSF+VRVDSQKHIDFSLTSPLGGGRPGRVKR+NQ
Sbjct: 142 VVNIPSFLVRVDSQKHIDFSLTSPLGGGRPGRVKRRNQ 179


>Glyma04g33900.2 
          Length = 183

 Score =  161 bits (408), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 82/98 (83%), Positives = 84/98 (85%), Gaps = 14/98 (14%)

Query: 1   MFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQ 60
           MFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLI+QRHI     
Sbjct: 82  MFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIKQRHI----- 136

Query: 61  VVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKNQ 98
                    RVDSQKHIDFSLTSPLGGGRPGRVKR+NQ
Sbjct: 137 ---------RVDSQKHIDFSLTSPLGGGRPGRVKRRNQ 165