Miyakogusa Predicted Gene

Lj0g3v0080659.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0080659.1 Non Chatacterized Hit- tr|Q7XB80|Q7XB80_ORYSJ
Putative uncharacterized protein OSJNBa0081K20.21
OS=O,67.14,2e-18,DAP3,Ribosomal protein S23/S29,
mitochondrial,CUFF.4162.1
         (72 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g29760.1                                                       133   5e-32
Glyma18g06320.1                                                       132   7e-32

>Glyma11g29760.1 
          Length = 436

 Score =  133 bits (334), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 63/72 (87%), Positives = 67/72 (93%)

Query: 1   MGMVKEFQDSMRPALLVRQSFLDLRDNFRRIVDPPLWSPPGKGVKARKQVVLDGPVSCGK 60
           +GMV EFQDS+R ALLVRQSFLDLRDNFRR+VDPP+WS  GKGVK RKQVVLDGPVSCGK
Sbjct: 116 VGMVNEFQDSLRTALLVRQSFLDLRDNFRRVVDPPMWSSNGKGVKVRKQVVLDGPVSCGK 175

Query: 61  SIALAMLVQWAR 72
           SIALAMLVQWAR
Sbjct: 176 SIALAMLVQWAR 187


>Glyma18g06320.1 
          Length = 437

 Score =  132 bits (333), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 63/72 (87%), Positives = 66/72 (91%)

Query: 1   MGMVKEFQDSMRPALLVRQSFLDLRDNFRRIVDPPLWSPPGKGVKARKQVVLDGPVSCGK 60
           MGMV EFQDS+R ALLVRQSFLDLRDNFRR+VDPP+WS  GKGVK RKQVVLDGPVSCGK
Sbjct: 117 MGMVDEFQDSLRTALLVRQSFLDLRDNFRRVVDPPMWSSNGKGVKVRKQVVLDGPVSCGK 176

Query: 61  SIALAMLVQWAR 72
           SI LAMLVQWAR
Sbjct: 177 SIVLAMLVQWAR 188