Miyakogusa Predicted Gene

Lj0g3v0080529.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0080529.1 Non Chatacterized Hit- tr|I3SA50|I3SA50_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.6,0,no
description,NULL; no description,Superoxide dismutase, copper/zinc
binding domain; Sod_Cu,Superox,CUFF.4141.1
         (317 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g04170.1                                                       477   e-135
Glyma12g08650.1                                                        63   4e-10
Glyma12g30260.1                                                        62   9e-10
Glyma03g40280.3                                                        60   3e-09
Glyma03g40280.1                                                        60   3e-09
Glyma11g19840.3                                                        60   3e-09
Glyma11g19840.2                                                        60   3e-09
Glyma11g19840.1                                                        60   4e-09
Glyma19g42890.2                                                        56   4e-08
Glyma19g42890.1                                                        56   4e-08
Glyma13g36680.1                                                        55   1e-07
Glyma16g27020.2                                                        54   2e-07
Glyma12g33810.1                                                        52   7e-07
Glyma03g40280.2                                                        52   7e-07
Glyma19g42890.3                                                        49   8e-06

>Glyma05g04170.1 
          Length = 304

 Score =  477 bits (1227), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 229/264 (86%), Positives = 243/264 (92%)

Query: 54  RFTLVKAFVAPPSPLRMDTKLSNQTEHVLPELLTEYMVDMKCAGCVNSVKEKLNTIKGVK 113
           R  LVK    PPS L MD KLS+Q + VLPELLTE+MVDMKC GCVN+VK KLN I GVK
Sbjct: 41  RLGLVKTLATPPSALHMDHKLSSQPDAVLPELLTEFMVDMKCEGCVNAVKNKLNEINGVK 100

Query: 114 NVEVDLSNQVVRILGSTPVKTMTEALEQTGRKARLIGQGVPEDFLISAAVSEFKGPNIFG 173
           NVEVDLSNQVVRILGSTPVKTMTEALEQTGRKARLIGQGVPEDFLISAAVSEFKGP+IFG
Sbjct: 101 NVEVDLSNQVVRILGSTPVKTMTEALEQTGRKARLIGQGVPEDFLISAAVSEFKGPDIFG 160

Query: 174 VVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFNPTNEENTKEPLG 233
           VVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTRGAASTGK+FNP NEEN+KEPLG
Sbjct: 161 VVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTRGAASTGKMFNPVNEENSKEPLG 220

Query: 234 DLGTLDVDEKGEAFYTGVRENLRVGDLIGRSLVVYATEDKSEHGVAAAVIARSAGVGENY 293
           DLGTL+ +EKGEAFY+GV+E LRV DLIGRS+VVYATEDKSEHG+ AAVIARSAGVGENY
Sbjct: 221 DLGTLEANEKGEAFYSGVKEKLRVADLIGRSVVVYATEDKSEHGITAAVIARSAGVGENY 280

Query: 294 KKLCTCDGTTIWEASDRDFVTSKV 317
           KKLCTCDGTTIWEA+D DFVTSKV
Sbjct: 281 KKLCTCDGTTIWEATDTDFVTSKV 304


>Glyma12g08650.1 
          Length = 204

 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 64/120 (53%), Gaps = 9/120 (7%)

Query: 162 AVSEFKGPN-IFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTRGAASTGKVF 220
           AV+  KG + + GV  L Q +     +  + +GL+PG HG+ ++E+GD T G  STG  F
Sbjct: 55  AVAVLKGTSAVEGVATLIQEDDGPTTVSVSITGLTPGLHGFHLHEYGDTTNGCISTGAHF 114

Query: 221 NPTN-----EENTKEPLGDLGTLDVDEKGEAFYTGVRENLRVG---DLIGRSLVVYATED 272
           NP N      E+     GDLG +  + +G A  T V   + +     ++GR+LVV+  ED
Sbjct: 115 NPNNLTHGAPEDEVRHAGDLGNIVANAEGVAEATIVDNQIPLSGPNSVVGRALVVHELED 174


>Glyma12g30260.1 
          Length = 183

 Score = 62.0 bits (149), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 63/121 (52%), Gaps = 10/121 (8%)

Query: 162 AVSEFKG-PNIFGVVRLAQV-NMELARIEANFSGLSPGKHGWSINEFGDLTRGAASTGKV 219
           AV+  KG  ++ G+V L Q  +     +    SGL+PG HG+ ++EFGD+T G  STG  
Sbjct: 33  AVAILKGNSSVHGLVTLTQQQDNGPTTVTVRVSGLTPGPHGFHLHEFGDITNGCISTGPH 92

Query: 220 FNPTN-----EENTKEPLGDLGTLDVDEKGEAFYTGVRENLRV---GDLIGRSLVVYATE 271
           FNP        E+     GDLG +  +  G A  T V   + +     ++GR+LVV+  E
Sbjct: 93  FNPNKLKHGAPEDKIRHAGDLGNIVANADGVAEATTVDNQIPLIGPNSVVGRALVVHELE 152

Query: 272 D 272
           D
Sbjct: 153 D 153


>Glyma03g40280.3 
          Length = 152

 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 8/110 (7%)

Query: 171 IFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFNPTNEENT-- 228
           + G +   Q       +  + +GL PG HG+ ++  GD T G  STG  FNP N+E+   
Sbjct: 14  VTGTIHFVQEGSGPTTVTGSLAGLKPGLHGFHVHALGDTTNGCLSTGSHFNPNNKEHGAP 73

Query: 229 ---KEPLGDLGTLDVDEKGEAFYTGVRENLRV---GDLIGRSLVVYATED 272
                  GDLG ++V + G   +T     + +    ++IGR++VV+A  D
Sbjct: 74  EDENRHAGDLGNVNVGDDGTVSFTITDSQIPLTGPNNIIGRAVVVHADPD 123


>Glyma03g40280.1 
          Length = 152

 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 8/110 (7%)

Query: 171 IFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFNPTNEENT-- 228
           + G +   Q       +  + +GL PG HG+ ++  GD T G  STG  FNP N+E+   
Sbjct: 14  VTGTIHFVQEGSGPTTVTGSLAGLKPGLHGFHVHALGDTTNGCLSTGSHFNPNNKEHGAP 73

Query: 229 ---KEPLGDLGTLDVDEKGEAFYTGVRENLRV---GDLIGRSLVVYATED 272
                  GDLG ++V + G   +T     + +    ++IGR++VV+A  D
Sbjct: 74  EDENRHAGDLGNVNVGDDGTVSFTITDSQIPLTGPNNIIGRAVVVHADPD 123


>Glyma11g19840.3 
          Length = 203

 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 9/120 (7%)

Query: 162 AVSEFKGPN-IFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTRGAASTGKVF 220
           AV+  KG + + GV  L Q +     +    +GL+PG HG+ ++E+GD T G  STG  F
Sbjct: 55  AVAVLKGTSAVEGVATLIQEDDGPTTVSVRITGLTPGLHGFHLHEYGDTTNGCISTGAHF 114

Query: 221 NPTN-----EENTKEPLGDLGTLDVDEKGEAFYTGVRENLRVG---DLIGRSLVVYATED 272
           NP        E+     GDLG +  + +G A  T V   + +     ++GR+LVV+  ED
Sbjct: 115 NPNKLTHGAPEDEVRHAGDLGNIVANAEGVAEATIVDNQIPLSGPNSVVGRALVVHELED 174


>Glyma11g19840.2 
          Length = 204

 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 9/120 (7%)

Query: 162 AVSEFKGPN-IFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTRGAASTGKVF 220
           AV+  KG + + GV  L Q +     +    +GL+PG HG+ ++E+GD T G  STG  F
Sbjct: 55  AVAVLKGTSAVEGVATLIQEDDGPTTVSVRITGLTPGLHGFHLHEYGDTTNGCISTGAHF 114

Query: 221 NPTN-----EENTKEPLGDLGTLDVDEKGEAFYTGVRENLRVG---DLIGRSLVVYATED 272
           NP        E+     GDLG +  + +G A  T V   + +     ++GR+LVV+  ED
Sbjct: 115 NPNKLTHGAPEDEVRHAGDLGNIVANAEGVAEATIVDNQIPLSGPNSVVGRALVVHELED 174


>Glyma11g19840.1 
          Length = 209

 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 9/120 (7%)

Query: 162 AVSEFKGPN-IFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTRGAASTGKVF 220
           AV+  KG + + GV  L Q +     +    +GL+PG HG+ ++E+GD T G  STG  F
Sbjct: 55  AVAVLKGTSAVEGVATLIQEDDGPTTVSVRITGLTPGLHGFHLHEYGDTTNGCISTGAHF 114

Query: 221 NPTN-----EENTKEPLGDLGTLDVDEKGEAFYTGVRENLRVG---DLIGRSLVVYATED 272
           NP        E+     GDLG +  + +G A  T V   + +     ++GR+LVV+  ED
Sbjct: 115 NPNKLTHGAPEDEVRHAGDLGNIVANAEGVAEATIVDNQIPLSGPNSVVGRALVVHELED 174


>Glyma19g42890.2 
          Length = 152

 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 8/110 (7%)

Query: 171 IFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFNPTNEENT-- 228
           + G +   Q       +  + +GL PG HG+ ++  GD T G  STG  FNP N E+   
Sbjct: 14  VTGTIFFTQEGNGPTTVTGSLAGLKPGLHGFHVHALGDTTNGCLSTGAHFNPNNNEHGAP 73

Query: 229 ---KEPLGDLGTLDVDEKGEAFYTGVRENLRV---GDLIGRSLVVYATED 272
                  GDLG ++V + G   ++     + +     +IGR++VV+A  D
Sbjct: 74  EDENRHAGDLGNVNVGDDGTVSFSITDSQIPLTGPNSIIGRAVVVHADSD 123


>Glyma19g42890.1 
          Length = 152

 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 8/110 (7%)

Query: 171 IFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFNPTNEENT-- 228
           + G +   Q       +  + +GL PG HG+ ++  GD T G  STG  FNP N E+   
Sbjct: 14  VTGTIFFTQEGNGPTTVTGSLAGLKPGLHGFHVHALGDTTNGCLSTGAHFNPNNNEHGAP 73

Query: 229 ---KEPLGDLGTLDVDEKGEAFYTGVRENLRV---GDLIGRSLVVYATED 272
                  GDLG ++V + G   ++     + +     +IGR++VV+A  D
Sbjct: 74  EDENRHAGDLGNVNVGDDGTVSFSITDSQIPLTGPNSIIGRAVVVHADSD 123


>Glyma13g36680.1 
          Length = 168

 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 2/80 (2%)

Query: 71  DTKLSNQTEHVLPELLT--EYMVDMKCAGCVNSVKEKLNTIKGVKNVEVDLSNQVVRILG 128
           DT +S++  ++    +T  E  V M C GC N VK  L  +KGV ++E+D+S Q V + G
Sbjct: 12  DTSISSKRFYLSKSYMTIIEMRVHMDCPGCENKVKSALQKLKGVDDIEIDMSLQKVTVNG 71

Query: 129 STPVKTMTEALEQTGRKARL 148
               K + + + +TGR+A L
Sbjct: 72  YADQKKVLKTVRKTGRRAEL 91


>Glyma16g27020.2 
          Length = 160

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 55/112 (49%), Gaps = 10/112 (8%)

Query: 170 NIFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFNPTNEEN-- 227
           NI G ++  Q       +    +GLS G HG+ I+ FGD T G  STG  FNP  +++  
Sbjct: 19  NIRGSLQFLQHPNGTTHVTGRVTGLSQGFHGFHIHAFGDTTNGCNSTGPHFNPFKKDHGA 78

Query: 228 ---TKEPLGDLGTLDVDEKGEAFYTGVREN----LRVGDLIGRSLVVYATED 272
               K   GDLG +     G A  + +R+       V  +IGR++VV+A  D
Sbjct: 79  PSDDKRHAGDLGNIAAGPDGVAEIS-IRDRQIPLTGVHSIIGRAVVVHADPD 129


>Glyma12g33810.1 
          Length = 142

 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 37/63 (58%)

Query: 86  LTEYMVDMKCAGCVNSVKEKLNTIKGVKNVEVDLSNQVVRILGSTPVKTMTEALEQTGRK 145
           + E  V M C GC N VK  L  +KGV ++E+D+S Q V + G    K + + + +TGR+
Sbjct: 3   IIEMRVHMDCPGCENKVKSALQKLKGVDDIEIDMSLQKVTVNGYADQKKVLKTVRKTGRR 62

Query: 146 ARL 148
           A L
Sbjct: 63  AEL 65


>Glyma03g40280.2 
          Length = 109

 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 7/93 (7%)

Query: 171 IFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFNPTNEENT-- 228
           + G +   Q       +  + +GL PG HG+ ++  GD T G  STG  FNP N+E+   
Sbjct: 14  VTGTIHFVQEGSGPTTVTGSLAGLKPGLHGFHVHALGDTTNGCLSTGSHFNPNNKEHGAP 73

Query: 229 ---KEPLGDLGTLDVDEKGEAFYTGVRENLRVG 258
                  GDLG ++V +   + +T  +++ R G
Sbjct: 74  EDENRHAGDLGNVNVGDDDSSHWT--KQHHRKG 104


>Glyma19g42890.3 
          Length = 116

 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 5/79 (6%)

Query: 171 IFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTRGAASTGKVFNPTNEENT-- 228
           + G +   Q       +  + +GL PG HG+ ++  GD T G  STG  FNP N E+   
Sbjct: 14  VTGTIFFTQEGNGPTTVTGSLAGLKPGLHGFHVHALGDTTNGCLSTGAHFNPNNNEHGAP 73

Query: 229 ---KEPLGDLGTLDVDEKG 244
                  GDLG ++V + G
Sbjct: 74  EDENRHAGDLGNVNVGDDG 92