Miyakogusa Predicted Gene

Lj0g3v0080309.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0080309.1 Non Chatacterized Hit- tr|D6WFV5|D6WFV5_TRICA
Putative uncharacterized protein OS=Tribolium
castaneu,40.5,2e-17,RNase_H2_suC,Ribonuclease H2, subunit C;
PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE
SUBUNI,CUFF.4132.1
         (150 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g36830.1                                                       227   3e-60
Glyma01g06180.1                                                       102   2e-22

>Glyma02g36830.1 
          Length = 177

 Score =  227 bits (579), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 114/147 (77%), Positives = 125/147 (85%), Gaps = 3/147 (2%)

Query: 5   KARIELKRDGTEDLTDRVHQLPCCVKHDGSAPVSHYFKPKPTGVG-DEGLPLQEAHFRGR 63
           KA I+LKRDG +DL+ RVHQLPCCVKHDG A VSHYFKPK  GVG DEGLPLQEAHFRGR
Sbjct: 33  KATIDLKRDG-KDLSGRVHQLPCCVKHDGPASVSHYFKPKHKGVGEDEGLPLQEAHFRGR 91

Query: 64  LLQGTTLQLPHGYSGFVLGKKTSPHAEEESSHSWETYAKFDNITYWNHDYLPSQNDDFSR 123
           LLQGTTL LPHGYSGFVL  K+SP   +E+SHSW+T A F +ITYWNHDY PSQND+  R
Sbjct: 92  LLQGTTLPLPHGYSGFVL-SKSSPPTSDENSHSWDTKATFQDITYWNHDYSPSQNDELFR 150

Query: 124 AFHWLTVANALHNPVTPEELASASIAL 150
           AFHWLTVA ALHNPVTPEELAS+S+ L
Sbjct: 151 AFHWLTVAKALHNPVTPEELASSSVTL 177


>Glyma01g06180.1 
          Length = 185

 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 56/90 (62%), Positives = 65/90 (72%), Gaps = 2/90 (2%)

Query: 5  KARIELKRDGTEDLTDRVHQLPCCVKHDGSAPVSHYFKPKPTGVG-DEGLPLQEAHFRGR 63
          KA I+LK D ++DL+ RVHQLP CVKHD  A  S    P    +G DEGL LQEAHFRGR
Sbjct: 3  KATIDLKGD-SKDLSGRVHQLPYCVKHDSPALFSTISNPNTKVLGEDEGLLLQEAHFRGR 61

Query: 64 LLQGTTLQLPHGYSGFVLGKKTSPHAEEES 93
          LLQGTTL LPH YSGFVL K++ P ++E S
Sbjct: 62 LLQGTTLPLPHDYSGFVLSKRSPPTSDENS 91