Miyakogusa Predicted Gene

Lj0g3v0080099.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0080099.1 Non Chatacterized Hit- tr|I1JPU8|I1JPU8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.44069
PE,54.84,0.000005,seg,NULL,NODE_64900_length_393_cov_31.951654.path2.1
         (93 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g34670.1                                                        52   2e-07
Glyma19g37340.2                                                        47   4e-06
Glyma19g37340.1                                                        47   4e-06

>Glyma03g34670.1 
          Length = 534

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/37 (67%), Positives = 28/37 (75%)

Query: 26 MKLLLFMVPLVFVTGLICVKGPNPSSWVHTRKPPLLL 62
          MKLLLFMVPLV V GL+ + GPNPSSWV     P+LL
Sbjct: 14 MKLLLFMVPLVLVAGLVFILGPNPSSWVSFANAPVLL 50


>Glyma19g37340.2 
          Length = 535

 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 22/36 (61%), Positives = 26/36 (72%)

Query: 26 MKLLLFMVPLVFVTGLICVKGPNPSSWVHTRKPPLL 61
          MKL L MVPLV V GL+ V GPNPSSW+ +   P+L
Sbjct: 15 MKLFLLMVPLVLVAGLVSVLGPNPSSWLFSANAPVL 50


>Glyma19g37340.1 
          Length = 537

 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 22/36 (61%), Positives = 26/36 (72%)

Query: 26 MKLLLFMVPLVFVTGLICVKGPNPSSWVHTRKPPLL 61
          MKL L MVPLV V GL+ V GPNPSSW+ +   P+L
Sbjct: 15 MKLFLLMVPLVLVAGLVSVLGPNPSSWLFSANAPVL 50