Miyakogusa Predicted Gene

Lj0g3v0079379.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0079379.1 Non Chatacterized Hit- tr|B9RRF5|B9RRF5_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,45.45,0.00000000000002,seg,NULL,CUFF.4074.1
         (441 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g01520.1                                                       191   1e-48
Glyma11g37570.1                                                       176   5e-44
Glyma19g05660.1                                                        54   3e-07

>Glyma18g01520.1 
          Length = 1133

 Score =  191 bits (486), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 116/234 (49%), Positives = 143/234 (61%), Gaps = 31/234 (13%)

Query: 44  SLSSDNTKGVFIDTNLDTHFATDVSVHDTVWDLKKRIKSEHPSQFPKFGPINIHAIKVKR 103
           ++++ N   VFIDTNLDTH A  VS  DTV DLKK I SEHP  FPK G + IH IKV+R
Sbjct: 2   NMATPNPNVVFIDTNLDTHLALVVSDLDTVSDLKKSILSEHPLCFPKIGQVQIHGIKVER 61

Query: 104 KGCFYQLVDSMCVRVAFNGSKKSWFLSVEASALGEGAKSDQLVPHASPNQVASL------ 157
           KG FY L DSM VR AF G   SWFLSV+ S L E ++++QL  H SPNQVA+L      
Sbjct: 62  KGYFYHLTDSMPVRSAFRGINGSWFLSVDVSVLRECSQNEQLFSHGSPNQVATLGIANNA 121

Query: 158 -------------DNLQLLQLENKQGEGQGIHNVSPCVSEQTDRGAVKNLKASVKLVGNN 204
                        D+ +L QLEN+Q E   IH  SPCVS+ T +G        VK   +N
Sbjct: 122 LIVGSPSKRVSTFDHFKLPQLENRQNE--EIHVASPCVSKHTGKG--------VKSSADN 171

Query: 205 EDGIPVHGSIPEAEERDFVNREVLPSLHIQCEVDGSVTSIKDVCDVREDDLPIS 258
           +   P+ GS+ E E+  FVNRE LPSL+I+CEVDGS   IKD  +V E + P+S
Sbjct: 172 DMETPLPGSVHETEDHCFVNRE-LPSLNIECEVDGSGKGIKDDHNVCE-ETPVS 223


>Glyma11g37570.1 
          Length = 1032

 Score =  176 bits (446), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 109/225 (48%), Positives = 137/225 (60%), Gaps = 20/225 (8%)

Query: 44  SLSSDNTKGVFIDTNLDTHFATDVSVHDTVWDLKKRIKSEHPSQFPKFGPINIHAIKVKR 103
           + S+  T  VFIDTNLDTH A  VS  DTV +LKK I SEHP  FPK G I IH IKV+R
Sbjct: 2   ATSTPKTNVVFIDTNLDTHLALVVSDLDTVSNLKKSILSEHPLCFPKIGKIQIHGIKVER 61

Query: 104 KGCFYQLVDSMCVRVAFNGSKKSWFLSVEASALGEGAKSDQLVPHASPNQV--------- 154
           KG FY L DSM VR AF+G K+SWFL+V+ S L E A++DQL      N           
Sbjct: 62  KGYFYHLTDSMPVRSAFSGVKESWFLTVDVSVLRECAQNDQLFSLGIANNALTVGSPSKR 121

Query: 155 -ASLDNLQLLQLENKQGEGQGIHNVSPCVSEQTDRGAVKNLKASVKLVGNNEDGIPVHGS 213
             + DN +L QL+N+  E + I   SP V + T +G        VK  G+++ G P+ GS
Sbjct: 122 GCTFDNFKLPQLDNRPVENEEIPVASPHVLKHTGKG--------VKSSGHHDTGTPLPGS 173

Query: 214 IPEAEERDFVNREVLPSLHIQCEVDGSVTSIKDVCDVREDDLPIS 258
           IPE E+  FVNR+ LPSL+ +CEVDGS   IKD  +V E + P+S
Sbjct: 174 IPETEDHCFVNRK-LPSLNTECEVDGSGKGIKDDRNVCE-EAPVS 216


>Glyma19g05660.1 
          Length = 468

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 36/62 (58%), Gaps = 9/62 (14%)

Query: 380 QTSIDRSSSAEKSKDCD---------QKIEHAATTDQKLCSLTIPCDNLASGTLIPMDQE 430
           Q   D ++S  K+  C          +K+EHAAT DQK+ S TIPCDN AS   IP+DQ 
Sbjct: 342 QNWADHTTSMRKTSTCPLCKASFMMIKKVEHAATADQKIYSQTIPCDNSASVIFIPVDQN 401

Query: 431 LP 432
           LP
Sbjct: 402 LP 403



 Score = 53.5 bits (127), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 64/143 (44%), Gaps = 37/143 (25%)

Query: 291 GKRTICNDSGVTIAAGKSCKKRR--------------------------TDTLNTKDGAL 324
           GKR ICN    T  A  S K RR                           D+  T   A 
Sbjct: 160 GKRHICNGKENTTVARPSRKGRRLASDLVDKVVLGPSILDLTTDDHLFRMDSQQTDAEAT 219

Query: 325 SCLSGGVTIDYLPDNNSSGPDAGIFNKKRSTTGGSDENELIK---------STTLFVEDT 375
           S LS GV  + +   NS GP+AG+ N+ R+  GGS++ E IK         ++T F+ED 
Sbjct: 220 SSLSVGVNNNIIL-QNSEGPNAGLSNQSRTIIGGSNDIEQIKDSSHISKPRNSTSFIEDP 278

Query: 376 PLVPQTSIDRSSS-AEKSKDCDQ 397
             VPQTSID  SS  EK  D DQ
Sbjct: 279 LPVPQTSIDLCSSDDEKFTDGDQ 301