Miyakogusa Predicted Gene

Lj0g3v0078799.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0078799.1 tr|G7ZWR4|G7ZWR4_MEDTR NBS-LRR resistance-like
protein 1O OS=Medicago truncatula GN=MTR_043s0017 PE=,53.4,1e-18,no
description,NULL; L domain-like,NULL,CUFF.4028.1
         (130 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g32030.1                                                        57   5e-09
Glyma04g29220.1                                                        48   2e-06
Glyma15g36930.1                                                        47   5e-06

>Glyma02g32030.1 
          Length = 826

 Score = 57.0 bits (136), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 1/87 (1%)

Query: 26  SLKNIVIYDSPGLEALPDWICNLSSLQHINLEDCSSLRSLPEEMPHLTNLQTPEIIHPDN 85
           +L +++I     LE LP+W+ NL+ L+ + +E C  L SLP+ M HLTNL+  E I+   
Sbjct: 641 TLHSLLIVGCNNLEELPEWLSNLNCLKLLMIEHCPKLLSLPDSMHHLTNLEHLE-INDCP 699

Query: 86  RLIEECENEASTTRHKIAHIPKIILQE 112
            L + C+       HKI+HI ++I+ E
Sbjct: 700 ELCKRCQPGVGLDWHKISHIKQVIIGE 726


>Glyma04g29220.1 
          Length = 855

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 4/93 (4%)

Query: 26  SLKNIVIYDSPGLEALPDWICNLSSLQHINLEDCSSLRSLPEEMPHLTNLQTPEIIHPDN 85
           S+K +VI    G E+LPDW+ NLSSL  + + +CS L+SLPE +  L +LQ  ++   + 
Sbjct: 761 SIKRLVINGYCG-ESLPDWVGNLSSLLSLEISNCSGLKSLPEGICKLKSLQ--QLCVYNC 817

Query: 86  RLIEECENEASTTRH-KIAHIPKIILQESYPST 117
            L+E      S     KIAHIPK+++    PS 
Sbjct: 818 SLLERRYRRISGEDWPKIAHIPKVMVSAYTPSA 850


>Glyma15g36930.1 
          Length = 1002

 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 22/105 (20%)

Query: 24  FPSLKNIVIYDSPGLEALPDW-------------------ICNLSSLQHINLEDCSSLRS 64
            PSLK + IYD P +E+ P+                    +C LSSL+ +NL+DC +L+ 
Sbjct: 894 LPSLKELRIYDCPRVESFPEGGLPSNLKQMRLYKCSSGLGLCQLSSLKGLNLDDCPNLQQ 953

Query: 65  LPEE-MPHLTNLQTPEIIHPDNRLIEECENEASTTRHKIAHIPKI 108
           LPEE +P   ++   +I      L + C+N       KI HI  +
Sbjct: 954 LPEEGLPK--SISHLKISGNCPLLKQRCQNSGGQDWSKIVHIQTV 996