Miyakogusa Predicted Gene

Lj0g3v0078359.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0078359.1 tr|B4D8U4|B4D8U4_9BACT Cytoplasmic membrane
protein (Precursor) OS=Chthoniobacter flavus Ellin428
GN,30.92,0.000000000005,DUF2062,Domain of unknown function DUF2062;
seg,NULL,CUFF.3987.1
         (184 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g12170.2                                                       288   2e-78
Glyma06g48220.1                                                       285   3e-77
Glyma04g12170.1                                                       284   4e-77

>Glyma04g12170.2 
          Length = 183

 Score =  288 bits (737), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 147/184 (79%), Positives = 154/184 (83%), Gaps = 1/184 (0%)

Query: 1   MAIGKMGITDWFHRKITDPLLSIIRRGAEPNQLAFSAALGITFGVFPICGVTVFLCAMAI 60
           M  G + IT W  +KITDPLLSIIRRG EPNQLAFSAALGIT G+FPICGVTVFLC MAI
Sbjct: 1   MVNGNVKITSWVQKKITDPLLSIIRRGTEPNQLAFSAALGITLGLFPICGVTVFLCGMAI 60

Query: 61  ALLGSYCHAPTVMLANFVATPIELSLVVPFLRFGEVISGGPHFPLTSDALKKVFTGQASR 120
           ALLGS+CHAPTVMLANF+ATPIELSLVVPFLR GEVISGG HFPLTSDALKKV TGQASR
Sbjct: 61  ALLGSFCHAPTVMLANFIATPIELSLVVPFLRLGEVISGGSHFPLTSDALKKVLTGQASR 120

Query: 121 EVLLSVAHALLGWLVASPFILGTLYIVLLPCFKFLVQKFSTVXXXXXXXXXXXXXEISLK 180
           EVLLSVAHALLGWLVASPFILGTLYIVLLPCFK LV  FS+V             E+ LK
Sbjct: 121 EVLLSVAHALLGWLVASPFILGTLYIVLLPCFKILVHNFSSV-PLSPKKPLNPHSEVKLK 179

Query: 181 VRDV 184
           VRDV
Sbjct: 180 VRDV 183


>Glyma06g48220.1 
          Length = 176

 Score =  285 bits (728), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 144/177 (81%), Positives = 153/177 (86%), Gaps = 1/177 (0%)

Query: 8   ITDWFHRKITDPLLSIIRRGAEPNQLAFSAALGITFGVFPICGVTVFLCAMAIALLGSYC 67
           + +W  +KITDPLLSIIRRGAEPN LAFSAALG+T G+FPICGVTVFLC MAIALLGS+C
Sbjct: 1   MANWVQKKITDPLLSIIRRGAEPNHLAFSAALGVTLGLFPICGVTVFLCGMAIALLGSFC 60

Query: 68  HAPTVMLANFVATPIELSLVVPFLRFGEVISGGPHFPLTSDALKKVFTGQASREVLLSVA 127
           HAPTVMLANF+ATPIELSLVVPFLRFGEVISGG HFPLTSDALKKV TGQASREVLLSVA
Sbjct: 61  HAPTVMLANFIATPIELSLVVPFLRFGEVISGGSHFPLTSDALKKVLTGQASREVLLSVA 120

Query: 128 HALLGWLVASPFILGTLYIVLLPCFKFLVQKFSTVXXXXXXXXXXXXXEISLKVRDV 184
           HALLGWLVASPFILGTLYIVLLPCFK LV KFS+V             E+ LKVRDV
Sbjct: 121 HALLGWLVASPFILGTLYIVLLPCFKILVHKFSSV-PLSPKKPLNPHSEVKLKVRDV 176


>Glyma04g12170.1 
          Length = 293

 Score =  284 bits (726), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 140/162 (86%), Positives = 146/162 (90%)

Query: 1   MAIGKMGITDWFHRKITDPLLSIIRRGAEPNQLAFSAALGITFGVFPICGVTVFLCAMAI 60
           M  G + IT W  +KITDPLLSIIRRG EPNQLAFSAALGIT G+FPICGVTVFLC MAI
Sbjct: 1   MVNGNVKITSWVQKKITDPLLSIIRRGTEPNQLAFSAALGITLGLFPICGVTVFLCGMAI 60

Query: 61  ALLGSYCHAPTVMLANFVATPIELSLVVPFLRFGEVISGGPHFPLTSDALKKVFTGQASR 120
           ALLGS+CHAPTVMLANF+ATPIELSLVVPFLR GEVISGG HFPLTSDALKKV TGQASR
Sbjct: 61  ALLGSFCHAPTVMLANFIATPIELSLVVPFLRLGEVISGGSHFPLTSDALKKVLTGQASR 120

Query: 121 EVLLSVAHALLGWLVASPFILGTLYIVLLPCFKFLVQKFSTV 162
           EVLLSVAHALLGWLVASPFILGTLYIVLLPCFK LV  FS+V
Sbjct: 121 EVLLSVAHALLGWLVASPFILGTLYIVLLPCFKILVHNFSSV 162