Miyakogusa Predicted Gene

Lj0g3v0077289.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0077289.1 tr|B9HS45|B9HS45_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_767606 PE=4 SV=1,41.03,7e-16,
,CUFF.3916.1
         (122 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g42270.1                                                       145   7e-36

>Glyma10g42270.1 
          Length = 130

 Score =  145 bits (367), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 80/123 (65%), Positives = 91/123 (73%), Gaps = 8/123 (6%)

Query: 2   ETQYDDDTFYAEIRRQILLLTSEDNEDSLERKRYKSTSVGDNGYGGSIRSVYSR--TSPP 59
           E +Y++DTFYAEIRRQILLLTSEDNED LE + +   +V +   GGS RS YS    SP 
Sbjct: 12  EAEYEEDTFYAEIRRQILLLTSEDNEDLLETRSFNPINVTN---GGSNRSAYSFNCASPS 68

Query: 60  ASNFCSWETNSSDSPPYWLVSLWKNGKGTGVFIPQAASSAPNNNRQGKM-NSRRKIYKPV 118
           ASNF  WE +SS SPP WLV+LWKNGKGTGVFIPQ A     N R G+M NSRRKIY+PV
Sbjct: 69  ASNFSLWERHSSGSPPLWLVNLWKNGKGTGVFIPQVACRK--NQRPGRMNNSRRKIYRPV 126

Query: 119 VNK 121
           VNK
Sbjct: 127 VNK 129