Miyakogusa Predicted Gene

Lj0g3v0076559.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0076559.1 tr|G7KFW5|G7KFW5_MEDTR Pre-mRNA-splicing factor
38B OS=Medicago truncatula GN=MTR_5g077180 PE=4
SV=1,97.96,0,PRP38,Pre-mRNA-splicing factor 38;
UNCHARACTERIZED,Pre-mRNA-splicing factor 38,CUFF.3871.1
         (153 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g39220.1                                                       302   1e-82
Glyma02g40900.1                                                       301   2e-82

>Glyma14g39220.1 
          Length = 444

 Score =  302 bits (773), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 139/147 (94%), Positives = 144/147 (97%)

Query: 1   MEIQTSGRPIESLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR 60
           MEIQT GRPI+SLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIQTCGRPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTSFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYVADPKTLWSWFEPYIK 120
           GPST+FCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRY ADPKTLW+WFE Y+K
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYCADPKTLWNWFESYVK 120

Query: 121 DDEEFSPGSNGRMTTMGVYIRDLLLGQ 147
           DDEEFSPGSNGRMTTMGVY+RDLLLGQ
Sbjct: 121 DDEEFSPGSNGRMTTMGVYVRDLLLGQ 147


>Glyma02g40900.1 
          Length = 428

 Score =  301 bits (770), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 139/147 (94%), Positives = 144/147 (97%)

Query: 1   MEIQTSGRPIESLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR 60
           MEIQT GRPI+SLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR
Sbjct: 1   MEIQTCGRPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR 60

Query: 61  GPSTSFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYVADPKTLWSWFEPYIK 120
           GPST+FCLLYKFFTMKLTVKQMHGLLKH DSPYIRAVGFLYLRY ADPKTLW+WFEPY+K
Sbjct: 61  GPSTAFCLLYKFFTMKLTVKQMHGLLKHLDSPYIRAVGFLYLRYCADPKTLWNWFEPYVK 120

Query: 121 DDEEFSPGSNGRMTTMGVYIRDLLLGQ 147
           DDEEFSPGSNGRMTTMGVY+RDLLLGQ
Sbjct: 121 DDEEFSPGSNGRMTTMGVYVRDLLLGQ 147