Miyakogusa Predicted Gene

Lj0g3v0076259.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0076259.1 tr|A9T4G5|A9T4G5_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_140119,32.59,6e-18,seg,NULL,CUFF.3846.1
         (248 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g09640.1                                                       223   2e-58
Glyma02g14080.1                                                       220   1e-57

>Glyma01g09640.1 
          Length = 252

 Score =  223 bits (567), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 133/256 (51%), Positives = 158/256 (61%), Gaps = 12/256 (4%)

Query: 1   MEDVITEAAPPSRLLEEDLNXXXXXXXXXXXXXXIFPHHQQQQPLKPTXXXXXXX-XXXX 59
           MEDVITEAAPPSR LEEDLN              IFPH++   PLKP+            
Sbjct: 1   MEDVITEAAPPSRFLEEDLNIFTPPSPPLPTPFLIFPHNKL--PLKPSLLIIALSPSSLA 58

Query: 60  XXXXXXXTPQTLTASLILPESNTFLDLHS-----LSPTSLLAAVRTPIPAHRAVAVAKLL 114
                     T  ASLILPE    L  H+     LSP +LLA V  P+P HRA AVA+ L
Sbjct: 59  LFNQTLTLTLTPLASLILPELPLSLPDHNASILPLSPDTLLAVVPFPVPPHRAHAVARTL 118

Query: 115 LGDKIKPSSVIVLDSLDPRHHRGRLSSDLPIAFKLESSAERAVXXXXXXXXXX--YYPSG 172
           L   I+P SV+VLDSLDP + RG+LSSD  +AFKLE+SAER +            YYPSG
Sbjct: 119 L--SIRPYSVLVLDSLDPTNFRGKLSSDEAVAFKLETSAERKMTSSEKLLGEELDYYPSG 176

Query: 173 SIVEGLAAAILARCQILKLRASLCVSWPQFDASAVLLVKDLLQRGALRGFDFGLSDDQAL 232
           S+V+GL AAILARCQ++ +RASLC SWP+FD S V L+K LL+RG LRGF+FGLSDD  L
Sbjct: 177 SVVDGLGAAILARCQVMNVRASLCFSWPRFDMSVVALIKGLLRRGVLRGFEFGLSDDGVL 236

Query: 233 KFGRSKDSEFPSHLYI 248
           K G+ +D    S LYI
Sbjct: 237 KIGKGRDRVLHSELYI 252


>Glyma02g14080.1 
          Length = 252

 Score =  220 bits (560), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 135/256 (52%), Positives = 159/256 (62%), Gaps = 12/256 (4%)

Query: 1   MEDVITEAAPPSRLLEEDLNXXXXXXXXXXXXXXIFPHHQQQQPLKPTXXXXXXX-XXXX 59
           MEDVITEAAPPSR LEEDLN              IFPH++Q   LKP+            
Sbjct: 1   MEDVITEAAPPSRFLEEDLNIFTPPSPPLPKPFLIFPHNKQT--LKPSLLIIALSPSSLA 58

Query: 60  XXXXXXXTPQTLTASLILPESNTFLDLHS-----LSPTSLLAAVRTPIPAHRAVAVAKLL 114
                     T  ASLILPE    L  H+     LSP +LLA V  P+P+HRA AVA+ L
Sbjct: 59  LFNQTLTLTLTPLASLILPELPLSLPDHNVSILPLSPDTLLAPVPFPVPSHRAHAVARAL 118

Query: 115 LGDKIKPSSVIVLDSLDPRHHRGRLSSDLPIAFKLESSAE--RAVXXXXXXXXXXYYPSG 172
           L   I+P SV+VLDSLDP + RG+LSSD  +AFKLE+SAE  RA           YYPSG
Sbjct: 119 LS--IRPDSVLVLDSLDPTNFRGKLSSDDAVAFKLETSAEMKRAHDEKLLGEELDYYPSG 176

Query: 173 SIVEGLAAAILARCQILKLRASLCVSWPQFDASAVLLVKDLLQRGALRGFDFGLSDDQAL 232
           S+V+GL AAILARCQ++ +RASLCVSWP+FD S V L+K LL R  L GF+FGLSDD+ L
Sbjct: 177 SVVDGLGAAILARCQLMNIRASLCVSWPRFDKSVVALIKGLLGRRVLPGFEFGLSDDEVL 236

Query: 233 KFGRSKDSEFPSHLYI 248
           K GRS+D    S LYI
Sbjct: 237 KIGRSRDRVVHSELYI 252