Miyakogusa Predicted Gene
- Lj0g3v0076199.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0076199.1 Non Chatacterized Hit- tr|D5ADJ7|D5ADJ7_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,38.1,1e-16,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
RING/U-box,NULL; no description,Zinc finger, RING/F,CUFF.3839.1
(412 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma02g12150.1 632 0.0
Glyma01g06060.1 423 e-118
Glyma06g01220.2 80 5e-15
Glyma06g01220.1 80 5e-15
Glyma12g36420.4 77 3e-14
Glyma12g36420.2 77 3e-14
Glyma12g36420.1 77 3e-14
Glyma12g36420.3 77 4e-14
Glyma04g01190.2 74 2e-13
Glyma04g01190.1 74 2e-13
Glyma04g03190.1 74 4e-13
Glyma06g03240.1 72 1e-12
Glyma14g07790.2 67 3e-11
Glyma14g07790.1 67 3e-11
Glyma17g37190.1 67 3e-11
Glyma13g23160.1 57 3e-08
>Glyma02g12150.1
Length = 414
Score = 632 bits (1631), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/413 (77%), Positives = 342/413 (82%), Gaps = 2/413 (0%)
Query: 1 MGPNEPYWRTNTSFSPPPTRWDFRFQSEGLPYSLSDGVQLYDGSPTSSNSKESRAWVRGN 60
MGPNEPYWRTN+S+SPPPTRWDFRFQSEGLPY ++DGVQLY GS TSS KESR WVRGN
Sbjct: 1 MGPNEPYWRTNSSYSPPPTRWDFRFQSEGLPYDVNDGVQLY-GSSTSSIDKESRGWVRGN 59
Query: 61 QLYDLQYAASDGTGVFLSSPSDLSQGPQWTPPAIQEISIDDYETLTRKGPHPS-GLASFT 119
LYDL Y+ASD TG+FLSSPSDLSQGPQWTPPAIQEISID+YET TRK HPS SFT
Sbjct: 60 HLYDLHYSASDDTGIFLSSPSDLSQGPQWTPPAIQEISIDNYETSTRKDSHPSVDRVSFT 119
Query: 120 CTKEGTSKNPNRGGXXXXXXXXXXXXXTTKSNLSFQRNFSNHRSFISKPIHPLSFPDITT 179
KEGTS NPN GG T KS LS QRNFSN RSF+SKPIHP+SF D+TT
Sbjct: 120 PNKEGTSVNPNSGGSTSSQSESSESESTAKSRLSSQRNFSNLRSFMSKPIHPMSFNDLTT 179
Query: 180 TRDAFDPAVTTFTEFDTSTPLRDGQRWSSASSSQDFADVTESFELETPSHPHIPSDGSRC 239
TRDAFDPAVT FTEFDTSTPLRDG RWSSASSSQ+FAD+TESFELETP H SDG RC
Sbjct: 180 TRDAFDPAVTDFTEFDTSTPLRDGHRWSSASSSQEFADITESFELETPGRSHFLSDGFRC 239
Query: 240 RLCERFLSQRSPWSTRRIVRSGDMPTAGILPCRHVFHAECLEQTTPKTRKSDPPCPVCVK 299
LCERFL+QRSPWS+RRIVRSGDMPT G+LPC H FHAECLEQTTPKT+KSDPPCPVCVK
Sbjct: 240 GLCERFLTQRSPWSSRRIVRSGDMPTIGVLPCCHAFHAECLEQTTPKTQKSDPPCPVCVK 299
Query: 300 FEEENSPDQRGTLRLRNGFPRLKPFCEDGPSRSWGCSQAGDCVAGALHAQPRNAMFLLNR 359
EEENSPDQRG LRLR GFPRLK +DGPSR WGC Q GDCV GALHA PRN M LLNR
Sbjct: 300 LEEENSPDQRGHLRLRTGFPRLKSSRDDGPSRPWGCVQVGDCVEGALHAPPRNTMLLLNR 359
Query: 360 NRIKRNLSSKGNLSKEFPGKIRKSGAYSSQLFSGSSADQEAAGCSMATAGPSM 412
NRIK+NLS KGN+ KEFPGK+RK+G +SS LFSGSSAD EA G S ATAGPS+
Sbjct: 360 NRIKKNLSLKGNIGKEFPGKMRKNGTFSSHLFSGSSADGEAVGSSKATAGPSV 412
>Glyma01g06060.1
Length = 346
Score = 423 bits (1088), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/321 (70%), Positives = 240/321 (74%), Gaps = 29/321 (9%)
Query: 1 MGPNEPYWRTNTSFSPPPTRWDFRFQSEGLPYSLSDGVQLYDGSPTSSNSKESRAWVRGN 60
MGPNEPYWRTN+SFSPPPTRWDFRFQSEGL Y ++DGVQLY GS TS N KESR WVRGN
Sbjct: 1 MGPNEPYWRTNSSFSPPPTRWDFRFQSEGLSYGVNDGVQLY-GSSTSENDKESRGWVRGN 59
Query: 61 QLYDLQYAASDGTGVFLSSPSDLSQGPQWTPPAIQEISIDDYETLTRKGPHPS-GLASFT 119
LYDL Y+ASDGTG+FLSSPSDLSQGPQWTPPAIQEISID+YET TRK HPS G SFT
Sbjct: 60 HLYDLHYSASDGTGIFLSSPSDLSQGPQWTPPAIQEISIDNYETSTRKDSHPSVGRVSFT 119
Query: 120 CTKEGTSKNPNRGGXXXXXXXXXXXXXTTKSNLSFQRNFSNHRSFISKPIHPLSFPDITT 179
KEGTS N GG TTKS+LS +RNF+N
Sbjct: 120 PNKEGTSVNHYCGGSTSSQSESSESESTTKSHLSSERNFAN------------------- 160
Query: 180 TRDAFDPAVTTFTEFDTSTPLRDGQRWSSASSSQDFADVTESFELETPSHPHIPSDGSRC 239
+T FTEFDTSTPLRDGQRWSSASSSQ+FADVTESFELETP H SDG +C
Sbjct: 161 -------LLTDFTEFDTSTPLRDGQRWSSASSSQEFADVTESFELETPGRSHFLSDGFKC 213
Query: 240 RLCERFLSQRSPWSTRRIVRSGDMPTAGILPCRHVFHAECLEQTTPKTRKSDPPCPVCVK 299
LCERFLSQRSPWS+RRIVRSGDMPT G+LPC H FHAECLEQ TPKTRKSDPPCPVCVK
Sbjct: 214 GLCERFLSQRSPWSSRRIVRSGDMPTIGVLPCCHAFHAECLEQATPKTRKSDPPCPVCVK 273
Query: 300 FEEENSPDQRGTLRLRNGFPR 320
EENSPDQR LRLR G R
Sbjct: 274 L-EENSPDQRSHLRLRTGKVR 293
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 29/35 (82%)
Query: 378 GKIRKSGAYSSQLFSGSSADQEAAGCSMATAGPSM 412
GK+RK+G +SS LFSGSSAD EA CS ATAGPS+
Sbjct: 290 GKVRKNGIFSSHLFSGSSADGEAVSCSKATAGPSI 324
>Glyma06g01220.2
Length = 435
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 45/71 (63%)
Query: 233 PSDGSRCRLCERFLSQRSPWSTRRIVRSGDMPTAGILPCRHVFHAECLEQTTPKTRKSDP 292
P D C +C + L+++S WST++I+ S D+ +L C HV+HAECLE TP K DP
Sbjct: 264 PVDLQSCGICSKLLAEKSSWSTQKIIASNDLSVVAVLICGHVYHAECLEIMTPDINKYDP 323
Query: 293 PCPVCVKFEEE 303
CPVC E++
Sbjct: 324 ACPVCTFGEKQ 334
>Glyma06g01220.1
Length = 435
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 45/71 (63%)
Query: 233 PSDGSRCRLCERFLSQRSPWSTRRIVRSGDMPTAGILPCRHVFHAECLEQTTPKTRKSDP 292
P D C +C + L+++S WST++I+ S D+ +L C HV+HAECLE TP K DP
Sbjct: 264 PVDLQSCGICSKLLAEKSSWSTQKIIASNDLSVVAVLICGHVYHAECLEIMTPDINKYDP 323
Query: 293 PCPVCVKFEEE 303
CPVC E++
Sbjct: 324 ACPVCTFGEKQ 334
>Glyma12g36420.4
Length = 432
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 59/112 (52%), Gaps = 15/112 (13%)
Query: 191 FTEFDTSTPLRDGQRWSSASSSQDFADVTESFELETPSHP-----HIPSDGSRCRLCERF 245
F+E TST L+ +RWS F + F E P + P D C +C +
Sbjct: 231 FSEL-TSTSLK--ERWS-------FDSESFGFNCERPVRSSSRFSNSPVDLQTCGVCSKL 280
Query: 246 LSQRSPWSTRRIVRSGDMPTAGILPCRHVFHAECLEQTTPKTRKSDPPCPVC 297
L+++S W T++I+ S D+ +L C HV+HAECLE T + K DP CPVC
Sbjct: 281 LTEKSSWGTQKIIASNDLSVVSVLICGHVYHAECLESLTSEVNKYDPSCPVC 332
>Glyma12g36420.2
Length = 432
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 59/112 (52%), Gaps = 15/112 (13%)
Query: 191 FTEFDTSTPLRDGQRWSSASSSQDFADVTESFELETPSHP-----HIPSDGSRCRLCERF 245
F+E TST L+ +RWS F + F E P + P D C +C +
Sbjct: 231 FSEL-TSTSLK--ERWS-------FDSESFGFNCERPVRSSSRFSNSPVDLQTCGVCSKL 280
Query: 246 LSQRSPWSTRRIVRSGDMPTAGILPCRHVFHAECLEQTTPKTRKSDPPCPVC 297
L+++S W T++I+ S D+ +L C HV+HAECLE T + K DP CPVC
Sbjct: 281 LTEKSSWGTQKIIASNDLSVVSVLICGHVYHAECLESLTSEVNKYDPSCPVC 332
>Glyma12g36420.1
Length = 432
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 59/112 (52%), Gaps = 15/112 (13%)
Query: 191 FTEFDTSTPLRDGQRWSSASSSQDFADVTESFELETPSHP-----HIPSDGSRCRLCERF 245
F+E TST L+ +RWS F + F E P + P D C +C +
Sbjct: 231 FSEL-TSTSLK--ERWS-------FDSESFGFNCERPVRSSSRFSNSPVDLQTCGVCSKL 280
Query: 246 LSQRSPWSTRRIVRSGDMPTAGILPCRHVFHAECLEQTTPKTRKSDPPCPVC 297
L+++S W T++I+ S D+ +L C HV+HAECLE T + K DP CPVC
Sbjct: 281 LTEKSSWGTQKIIASNDLSVVSVLICGHVYHAECLESLTSEVNKYDPSCPVC 332
>Glyma12g36420.3
Length = 427
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 59/112 (52%), Gaps = 15/112 (13%)
Query: 191 FTEFDTSTPLRDGQRWSSASSSQDFADVTESFELETPSHP-----HIPSDGSRCRLCERF 245
F+E TST L+ +RWS F + F E P + P D C +C +
Sbjct: 226 FSEL-TSTSLK--ERWS-------FDSESFGFNCERPVRSSSRFSNSPVDLQTCGVCSKL 275
Query: 246 LSQRSPWSTRRIVRSGDMPTAGILPCRHVFHAECLEQTTPKTRKSDPPCPVC 297
L+++S W T++I+ S D+ +L C HV+HAECLE T + K DP CPVC
Sbjct: 276 LTEKSSWGTQKIIASNDLSVVSVLICGHVYHAECLESLTSEVNKYDPSCPVC 327
>Glyma04g01190.2
Length = 435
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 42/69 (60%)
Query: 235 DGSRCRLCERFLSQRSPWSTRRIVRSGDMPTAGILPCRHVFHAECLEQTTPKTRKSDPPC 294
D C +C + L+++S WS ++I+ S D+ +L C HV HAECLE TP K DP C
Sbjct: 266 DLQSCGICSKLLAEKSSWSMQKIIASNDLSVVAVLVCGHVCHAECLEIMTPDINKYDPAC 325
Query: 295 PVCVKFEEE 303
PVC E++
Sbjct: 326 PVCTFGEKQ 334
>Glyma04g01190.1
Length = 435
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 42/69 (60%)
Query: 235 DGSRCRLCERFLSQRSPWSTRRIVRSGDMPTAGILPCRHVFHAECLEQTTPKTRKSDPPC 294
D C +C + L+++S WS ++I+ S D+ +L C HV HAECLE TP K DP C
Sbjct: 266 DLQSCGICSKLLAEKSSWSMQKIIASNDLSVVAVLVCGHVCHAECLEIMTPDINKYDPAC 325
Query: 295 PVCVKFEEE 303
PVC E++
Sbjct: 326 PVCTFGEKQ 334
>Glyma04g03190.1
Length = 437
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%)
Query: 235 DGSRCRLCERFLSQRSPWSTRRIVRSGDMPTAGILPCRHVFHAECLEQTTPKTRKSDPPC 294
D C C + L++RS W +++ + S D+ +L C HV+HAECLE TP+ DP C
Sbjct: 272 DLQSCGACSKLLTERSAWGSQKFIASSDLSVVAVLVCGHVYHAECLETITPEADSYDPAC 331
Query: 295 PVCVKFEEENSPDQRGTLR 313
P+C+ E+ S + R
Sbjct: 332 PICMVGEKHMSKLSKKGFR 350
>Glyma06g03240.1
Length = 422
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%)
Query: 235 DGSRCRLCERFLSQRSPWSTRRIVRSGDMPTAGILPCRHVFHAECLEQTTPKTRKSDPPC 294
D C C + L+ RS W +++ + S D+ +L C HV+HAECLE TP+ DP C
Sbjct: 257 DLQSCGACSKLLTDRSAWGSQKFIASSDLSVVAVLVCGHVYHAECLETITPEADSYDPAC 316
Query: 295 PVCVKFEE 302
P+C+ E+
Sbjct: 317 PICMVGEK 324
>Glyma14g07790.2
Length = 434
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 239 CRLCERFLSQRSPWSTRRIVRSGDMPTAGILPCRHVFHAECLEQTTPKTRKSDPPCPVCV 298
C C + L++RS WS ++ + + D+ +L C H +HAECLE T + + DP CP+C+
Sbjct: 270 CGACSKLLTERSTWSNQKFISNSDLSVVAVLVCGHSYHAECLEAMTSEADRYDPACPICM 329
>Glyma14g07790.1
Length = 434
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 239 CRLCERFLSQRSPWSTRRIVRSGDMPTAGILPCRHVFHAECLEQTTPKTRKSDPPCPVCV 298
C C + L++RS WS ++ + + D+ +L C H +HAECLE T + + DP CP+C+
Sbjct: 270 CGACSKLLTERSTWSNQKFISNSDLSVVAVLVCGHSYHAECLEAMTSEADRYDPACPICM 329
>Glyma17g37190.1
Length = 434
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 239 CRLCERFLSQRSPWSTRRIVRSGDMPTAGILPCRHVFHAECLEQTTPKTRKSDPPCPVCV 298
C C + L++RS WS ++ + + D+ +L C H +HAECLE T + + DP CP+C+
Sbjct: 270 CGACSKLLTERSTWSNQKFIANSDLSVVAVLVCGHSYHAECLEAMTSEADRYDPACPICM 329
>Glyma13g23160.1
Length = 156
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 239 CRLCERFLSQRSPWSTRRIVRSGDMPTAGILPCRHVFHAECLEQTTPKTRKSDPPCPVC 297
C +CE+ LSQ++ + + S ++ +L C HV+HA CLEQ TP DP CPVC
Sbjct: 89 CGICEKLLSQKNNFLGSSM--SCELSAVAVLVCGHVYHANCLEQRTPFEELHDPTCPVC 145