Miyakogusa Predicted Gene
- Lj0g3v0076169.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0076169.1 tr|Q40184|Q40184_LEMGI L.gibba negatively
light-regulated protein (Lg106) (Fragment) OS=Lemna gibba
,78.79,6e-18,seg,NULL;
Endosulfine,Endosulphine,NODE_74571_length_865_cov_31.217340.path1.1
(151 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma01g06080.1 176 7e-45
Glyma02g12170.1 174 4e-44
Glyma15g40390.1 135 2e-32
Glyma08g18560.1 131 2e-31
Glyma08g18560.2 131 3e-31
Glyma08g18560.3 131 3e-31
Glyma15g15380.1 74 8e-14
Glyma09g04350.1 66 1e-11
Glyma15g15380.2 53 1e-07
>Glyma01g06080.1
Length = 160
Score = 176 bits (447), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 100/161 (62%), Positives = 109/161 (67%), Gaps = 11/161 (6%)
Query: 1 MSEAKDVEDLK-------NSPEGDVNSHDSGDDLKESDKDQNDXXXXXXXXXXXXAVKKK 53
MS+AK VEDLK +SP +V+S S DDLK+SD D++D AVKKK
Sbjct: 1 MSDAK-VEDLKKEEEVGDDSPRNEVDSEKSADDLKDSDNDKSDGNPMPSSQQEEAAVKKK 59
Query: 54 YGGMLPKKPPLISKDHERAYFDSADWALGKQGANKPKGPLEALRPKLQPTHQQARSRRSA 113
YGGMLPKKPPLISKDHERAYFDSADWALGKQGA KPKGPLEALRPKLQPT Q ARSRRSA
Sbjct: 60 YGGMLPKKPPLISKDHERAYFDSADWALGKQGAQKPKGPLEALRPKLQPTQQHARSRRSA 119
Query: 114 YAPSDDCE---GXXXXXXXXXXXXXXXXXXKNDTAQDQSCH 151
YAP+DD E K+DTAQDQSCH
Sbjct: 120 YAPADDNEVDGCNSDASAEHQSATEEVGGDKSDTAQDQSCH 160
>Glyma02g12170.1
Length = 160
Score = 174 bits (440), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 99/161 (61%), Positives = 110/161 (68%), Gaps = 11/161 (6%)
Query: 1 MSEAKDVEDLK-------NSPEGDVNSHDSGDDLKESDKDQNDXXXXXXXXXXXXAVKKK 53
MSEAK V+DLK +SP+ +V+S S DDLK+SD D++D AVKKK
Sbjct: 1 MSEAK-VQDLKKEEEVADDSPKNEVDSGKSVDDLKDSDNDKSDGNAMPSSHQEEAAVKKK 59
Query: 54 YGGMLPKKPPLISKDHERAYFDSADWALGKQGANKPKGPLEALRPKLQPTHQQARSRRSA 113
YGG+LPKKPPLISKDHERAYFDSADWALGKQGA KPKGPLEALRPKLQPT Q ARSRRSA
Sbjct: 60 YGGVLPKKPPLISKDHERAYFDSADWALGKQGAQKPKGPLEALRPKLQPTQQHARSRRSA 119
Query: 114 YAPSDDCE---GXXXXXXXXXXXXXXXXXXKNDTAQDQSCH 151
YAP+DD E K+DTAQDQSCH
Sbjct: 120 YAPADDNEVDGCSSDSSAEHQSATEEVGGDKSDTAQDQSCH 160
>Glyma15g40390.1
Length = 117
Score = 135 bits (340), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/117 (60%), Positives = 82/117 (70%), Gaps = 13/117 (11%)
Query: 6 DVEDLKNSPEGDVNSHDSGDDLKESDKDQNDXXXXXXXXXXXXAVKKKYGGMLPKKPPLI 65
++E+ K + DVN+ D ++ S K + AVKKKYGGMLPKKPPLI
Sbjct: 3 NIEENKYLGQMDVNASDKSANMPSSQKQEE-------------AVKKKYGGMLPKKPPLI 49
Query: 66 SKDHERAYFDSADWALGKQGANKPKGPLEALRPKLQPTHQQARSRRSAYAPSDDCEG 122
SKDHERAYFDSADWALGKQG +KPKGPLEALRPKLQPT QQ R R+S YAPS + G
Sbjct: 50 SKDHERAYFDSADWALGKQGGDKPKGPLEALRPKLQPTQQQTRYRKSPYAPSGEEGG 106
>Glyma08g18560.1
Length = 118
Score = 131 bits (330), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/74 (83%), Positives = 65/74 (87%)
Query: 49 AVKKKYGGMLPKKPPLISKDHERAYFDSADWALGKQGANKPKGPLEALRPKLQPTHQQAR 108
+VKKKYGGMLPKKPPLISKDHERAYFDSADWALGKQG KPKGPLEALRPKLQPT QQ R
Sbjct: 34 SVKKKYGGMLPKKPPLISKDHERAYFDSADWALGKQGGEKPKGPLEALRPKLQPTQQQTR 93
Query: 109 SRRSAYAPSDDCEG 122
R+S YAPS + G
Sbjct: 94 YRKSPYAPSGEEGG 107
>Glyma08g18560.2
Length = 117
Score = 131 bits (330), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 62/74 (83%), Positives = 65/74 (87%)
Query: 49 AVKKKYGGMLPKKPPLISKDHERAYFDSADWALGKQGANKPKGPLEALRPKLQPTHQQAR 108
+VKKKYGGMLPKKPPLISKDHERAYFDSADWALGKQG KPKGPLEALRPKLQPT QQ R
Sbjct: 33 SVKKKYGGMLPKKPPLISKDHERAYFDSADWALGKQGGEKPKGPLEALRPKLQPTQQQTR 92
Query: 109 SRRSAYAPSDDCEG 122
R+S YAPS + G
Sbjct: 93 YRKSPYAPSGEEGG 106
>Glyma08g18560.3
Length = 116
Score = 131 bits (329), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 61/71 (85%), Positives = 64/71 (90%)
Query: 49 AVKKKYGGMLPKKPPLISKDHERAYFDSADWALGKQGANKPKGPLEALRPKLQPTHQQAR 108
+VKKKYGGMLPKKPPLISKDHERAYFDSADWALGKQG KPKGPLEALRPKLQPT QQ R
Sbjct: 33 SVKKKYGGMLPKKPPLISKDHERAYFDSADWALGKQGGEKPKGPLEALRPKLQPTQQQTR 92
Query: 109 SRRSAYAPSDD 119
R+S YAPS +
Sbjct: 93 YRKSPYAPSGE 103
>Glyma15g15380.1
Length = 90
Score = 73.6 bits (179), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/65 (63%), Positives = 46/65 (70%), Gaps = 4/65 (6%)
Query: 53 KYGGMLPKKPPLISKDHERAYFDSADWALGKQGAN---KPKGPLEALRPKLQPT-HQQAR 108
KYG + PKK PLISKD+ERA+FDSADWAL KQGA + +E LRPKLQ T HQQ
Sbjct: 22 KYGRLAPKKKPLISKDNERAFFDSADWALCKQGAGVNQQSTATVETLRPKLQRTPHQQLP 81
Query: 109 SRRSA 113
RR A
Sbjct: 82 PRRPA 86
>Glyma09g04350.1
Length = 93
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 46/68 (67%), Gaps = 7/68 (10%)
Query: 53 KYGGMLPKKPPLISKDHERAYFDSADWALGK---QGA---NKPKGPLEALRPKLQPT-HQ 105
KYG + PKK PLISK++ERA+FDSADWAL K QGA + +E LRPKLQ T HQ
Sbjct: 22 KYGRLAPKKKPLISKNNERAFFDSADWALCKSQQQGAGVNQQSTTAVETLRPKLQRTPHQ 81
Query: 106 QARSRRSA 113
Q RR A
Sbjct: 82 QLPPRRPA 89
>Glyma15g15380.2
Length = 70
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 36/52 (69%), Gaps = 4/52 (7%)
Query: 66 SKDHERAYFDSADWALGKQGA---NKPKGPLEALRPKLQPT-HQQARSRRSA 113
++D+ERA+FDSADWAL KQGA + +E LRPKLQ T HQQ RR A
Sbjct: 15 AEDNERAFFDSADWALCKQGAGVNQQSTATVETLRPKLQRTPHQQLPPRRPA 66