Miyakogusa Predicted Gene

Lj0g3v0075969.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0075969.1 tr|G7IYP6|G7IYP6_MEDTR F-box/kelch-repeat protein
OS=Medicago truncatula GN=MTR_3g013950 PE=4 SV=1,43.16,0.000002,
,CUFF.3823.1
         (90 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g06670.1                                                        56   9e-09
Glyma19g06700.1                                                        56   1e-08
Glyma08g29710.1                                                        52   2e-07
Glyma08g46490.1                                                        52   2e-07
Glyma20g18420.2                                                        51   2e-07
Glyma20g18420.1                                                        51   2e-07
Glyma17g01190.2                                                        51   3e-07
Glyma17g01190.1                                                        51   3e-07
Glyma19g06560.1                                                        50   5e-07
Glyma08g24680.1                                                        50   5e-07
Glyma02g04720.1                                                        50   8e-07

>Glyma19g06670.1 
          Length = 385

 Score = 55.8 bits (133), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 57/90 (63%), Gaps = 5/90 (5%)

Query: 1   MREYGVRESWTWLVSVSYEHLLYNGFPC-LQQLMCLSGDSGDMLLFVKYQNFKAVMIMYN 59
           MRE+GV  SWT L++V+ E LL    PC + +L+C+S ++GD+LL   Y + K   I+YN
Sbjct: 297 MREFGVENSWTQLLNVTLE-LLQAPLPCVILKLLCIS-ENGDVLLLANYISSK--FILYN 352

Query: 60  LRDNSVKCIQLPNIGYNLNNNGYVQSLISP 89
            +DN +   Q  N    ++++ Y+QSL+ P
Sbjct: 353 KKDNRIVYTQDFNNQVPMSSHDYIQSLVLP 382


>Glyma19g06700.1 
          Length = 364

 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 57/90 (63%), Gaps = 5/90 (5%)

Query: 1   MREYGVRESWTWLVSVSYEHLLYNGFPC-LQQLMCLSGDSGDMLLFVKYQNFKAVMIMYN 59
           MRE+GV  SWT L++V+ E LL    PC + +L+C+S ++GD+LL   Y + K   I+YN
Sbjct: 276 MREFGVENSWTQLLNVTLE-LLQAPLPCVILKLLCIS-ENGDVLLLANYISSK--FILYN 331

Query: 60  LRDNSVKCIQLPNIGYNLNNNGYVQSLISP 89
            +DN +   Q  N    ++++ Y+QSL+ P
Sbjct: 332 KKDNRIVYTQDFNNQVPMSSHDYIQSLVLP 361


>Glyma08g29710.1 
          Length = 393

 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 7/92 (7%)

Query: 2   REYGVRESWTWLVSVSYEHLLYNGFPCLQQL---MCLSGDSGDMLLFVKYQNFKAVMIMY 58
           RE+GV  SWT L++VSYEH   +G P   +    +C+S ++ D+LL    +   +  + Y
Sbjct: 302 REFGVERSWTRLLNVSYEHFRNHGCPPYYRFVTPLCMS-ENEDVLLLANDEG--SEFVFY 358

Query: 59  NLRDNSVKCIQ-LPNIGYNLNNNGYVQSLISP 89
           NLRDN +  IQ   +  ++  ++ YV SL+ P
Sbjct: 359 NLRDNRIDRIQDFDSYKFSFLSHDYVPSLVLP 390


>Glyma08g46490.1 
          Length = 395

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 2/89 (2%)

Query: 1   MREYGVRESWTWLVSVSYEHLLYNGFPCLQQLMCLSGDSGDMLLFVKYQNFKAVMIMYNL 60
           M+E+GV +SWT L+ V+Y HL     P    L     ++G++L+ V   N    M  YN 
Sbjct: 306 MKEFGVEKSWTLLMKVTYNHLQIPYPPDRPLLPFCISENGEVLMLV--NNDVLNMTFYNR 363

Query: 61  RDNSVKCIQLPNIGYNLNNNGYVQSLISP 89
           R+N V+ I +PN         Y+ SL+SP
Sbjct: 364 RNNRVEVIPIPNNNAWWQATNYIPSLVSP 392


>Glyma20g18420.2 
          Length = 390

 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 5/91 (5%)

Query: 1   MREYGVRESWTWLVSVSYEHL-LYNGFPCLQQLMCLSGDSGDMLLFVKYQNFKAVMIMYN 59
           M+E+GV +SWT  +++SY+ L ++ GF     ++C+S D G +LL           I+YN
Sbjct: 302 MKEFGVEKSWTRFLNISYDQLHIHGGFLDHPVILCMSEDDGVVLL---ENGGHGKFILYN 358

Query: 60  LRDNSVKCI-QLPNIGYNLNNNGYVQSLISP 89
            RDN+++C  +L    +   +  Y QS + P
Sbjct: 359 KRDNTIECYGELDKGRFQFLSYDYAQSFVMP 389


>Glyma20g18420.1 
          Length = 390

 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 5/91 (5%)

Query: 1   MREYGVRESWTWLVSVSYEHL-LYNGFPCLQQLMCLSGDSGDMLLFVKYQNFKAVMIMYN 59
           M+E+GV +SWT  +++SY+ L ++ GF     ++C+S D G +LL           I+YN
Sbjct: 302 MKEFGVEKSWTRFLNISYDQLHIHGGFLDHPVILCMSEDDGVVLL---ENGGHGKFILYN 358

Query: 60  LRDNSVKCI-QLPNIGYNLNNNGYVQSLISP 89
            RDN+++C  +L    +   +  Y QS + P
Sbjct: 359 KRDNTIECYGELDKGRFQFLSYDYAQSFVMP 389


>Glyma17g01190.2 
          Length = 392

 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 4/90 (4%)

Query: 1   MREYGVRESWTWLVSVSYEHLLYNGFPCLQQLMCLSGDSGDMLLFVKYQNFKAVMIMYNL 60
           MR YG R+SW  L S++  H    G   L+ +  L+ D GD +LF   ++ ++ +  Y+L
Sbjct: 277 MRVYGSRDSWEKLFSLTENHHHEMGSGKLKYVRPLALDDGDRVLF---EHNRSKLCWYDL 333

Query: 61  RDNSVKCIQLPN-IGYNLNNNGYVQSLISP 89
           +   V C++LP+ IG  +     VQSL+ P
Sbjct: 334 KTGDVSCVKLPSGIGNTIEGTVCVQSLVPP 363


>Glyma17g01190.1 
          Length = 392

 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 4/90 (4%)

Query: 1   MREYGVRESWTWLVSVSYEHLLYNGFPCLQQLMCLSGDSGDMLLFVKYQNFKAVMIMYNL 60
           MR YG R+SW  L S++  H    G   L+ +  L+ D GD +LF   ++ ++ +  Y+L
Sbjct: 277 MRVYGSRDSWEKLFSLTENHHHEMGSGKLKYVRPLALDDGDRVLF---EHNRSKLCWYDL 333

Query: 61  RDNSVKCIQLPN-IGYNLNNNGYVQSLISP 89
           +   V C++LP+ IG  +     VQSL+ P
Sbjct: 334 KTGDVSCVKLPSGIGNTIEGTVCVQSLVPP 363


>Glyma19g06560.1 
          Length = 339

 Score = 50.1 bits (118), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 54/87 (62%), Gaps = 5/87 (5%)

Query: 1   MREYGVRESWTWLVSVSYEHLLYNGFPC-LQQLMCLSGDSGDMLLFVKYQNFKAVMIMYN 59
           MRE+GV  SWT L++V+ E LL    PC + + +C+S ++GD+LL   Y + K   I+YN
Sbjct: 257 MREFGVENSWTQLLNVTLE-LLQAPLPCVILKPLCIS-ENGDVLLLANYISSK--FILYN 312

Query: 60  LRDNSVKCIQLPNIGYNLNNNGYVQSL 86
            +DN +   Q  N    ++++ Y+QSL
Sbjct: 313 KKDNRIVYTQDFNNQVPMSSHDYIQSL 339


>Glyma08g24680.1 
          Length = 387

 Score = 50.1 bits (118), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 8/89 (8%)

Query: 1   MREYGVRESWTWLVSVSYEHLLYNGFPCLQQLMCLSGDSGDMLLFVKYQNFKAVMIMYNL 60
           MRE+GV  SWT L++V+YE LL +  P     +C+S D  D++L   Y    A  ++YN 
Sbjct: 304 MREFGVENSWTKLLNVNYEQLLNHDRP-----LCMSQDE-DVVLLTSYAG--ARFVLYNR 355

Query: 61  RDNSVKCIQLPNIGYNLNNNGYVQSLISP 89
           R N  + ++     ++     YVQSL+SP
Sbjct: 356 RYNRSERMEHFKNKFSFYCYDYVQSLVSP 384


>Glyma02g04720.1 
          Length = 423

 Score = 49.7 bits (117), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 5/93 (5%)

Query: 1   MREYGVRESWTWLVSVSYEHLLYNGFPCLQQLMCLSGDSGDMLLFVKYQNFKAVMIMYNL 60
           MRE+G  +SWT L++VSY HL    FP    +     ++ D+LL   Y    A  ++ + 
Sbjct: 329 MREFGAEKSWTQLLNVSYHHLQVLDFPPCPVVPLCKSENDDVLLLEDYGG-GAEFVLVDK 387

Query: 61  RDNSVKCIQLPNIGYN----LNNNGYVQSLISP 89
           RDNS+  ++  N G +      ++ YVQSL+ P
Sbjct: 388 RDNSIDRMEGFNNGLSSFSAFVSHDYVQSLVLP 420