Miyakogusa Predicted Gene

Lj0g3v0074089.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0074089.1 tr|Q00WR4|Q00WR4_OSTTA Adaptin family protein
(ISS) OS=Ostreococcus tauri GN=Ot13g02690 PE=4
SV=1,35.71,6e-17,seg,NULL; Subdomain of clathrin and coatomer
appendage domain,Coatomer/calthrin adaptor appendage, C,CUFF.3782.1
         (214 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g30520.1                                                       363   e-101
Glyma17g05410.1                                                       356   1e-98
Glyma12g08940.1                                                       177   8e-45

>Glyma12g30520.1 
          Length = 1020

 Score =  363 bits (932), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 180/215 (83%), Positives = 189/215 (87%), Gaps = 1/215 (0%)

Query: 1    MELSLVPETIPPRAQVQCPLEVINLHPSRDVSVLDFSYKFGNEMVNVKLRVPAVLNKFLQ 60
            MELSLVPETIPPRAQVQCPLEVINLHPSRDV+VLDFSYKFGN+MVNVKLR+PAVLNKFLQ
Sbjct: 806  MELSLVPETIPPRAQVQCPLEVINLHPSRDVAVLDFSYKFGNDMVNVKLRLPAVLNKFLQ 865

Query: 61   PITISAEEFFPQWRSLPGPPLKLQEVVRGVRPLPLPEMANLFNSYHLTVCPGLDPNPNNL 120
            PITISAEEFFPQWRSLPGPPLKLQEVVRGVRPLPL EMANLFNSYHLTVCPGLDPNPNNL
Sbjct: 866  PITISAEEFFPQWRSLPGPPLKLQEVVRGVRPLPLLEMANLFNSYHLTVCPGLDPNPNNL 925

Query: 121  VISTTFYSESTRAMLCLIRIETDPADRTQLRMTVASGDPALTFEMKEFVKEQLVII-XXX 179
            V+STTFYSESTRAMLCL+RIETDPADRTQLRMTVASGDP LTFEMKEF+K+QLV I    
Sbjct: 926  VVSTTFYSESTRAMLCLVRIETDPADRTQLRMTVASGDPTLTFEMKEFIKDQLVSIPAIA 985

Query: 180  XXXXXXXXXXXXLVAQLAIAPATTNDPGALLAALL 214
                         +AQ   APA   DPGA+LAALL
Sbjct: 986  TRVPTQPAPTSPPLAQPGSAPAALTDPGAMLAALL 1020


>Glyma17g05410.1 
          Length = 1021

 Score =  356 bits (913), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 178/215 (82%), Positives = 185/215 (86%), Gaps = 1/215 (0%)

Query: 1    MELSLVPETIPPRAQVQCPLEVINLHPSRDVSVLDFSYKFGNEMVNVKLRVPAVLNKFLQ 60
            MELSLVPETIPPRAQVQCPLEVINLHPSRDV+VLDFSYKFGN MVNVKLR+PAVLNKFLQ
Sbjct: 807  MELSLVPETIPPRAQVQCPLEVINLHPSRDVAVLDFSYKFGNNMVNVKLRLPAVLNKFLQ 866

Query: 61   PITISAEEFFPQWRSLPGPPLKLQEVVRGVRPLPLPEMANLFNSYHLTVCPGLDPNPNNL 120
            PITISAEEFFPQWRSLPGPPLKLQEVVRGVRPLPL EMANLFNS+HLTVCPGLDPNPNNL
Sbjct: 867  PITISAEEFFPQWRSLPGPPLKLQEVVRGVRPLPLLEMANLFNSFHLTVCPGLDPNPNNL 926

Query: 121  VISTTFYSESTRAMLCLIRIETDPADRTQLRMTVASGDPALTFEMKEFVKEQLVII-XXX 179
            V STTFYSESTRAMLCL RIETDPADRTQLRMTVASGDP LTFE+KEF+K+QLV I    
Sbjct: 927  VASTTFYSESTRAMLCLARIETDPADRTQLRMTVASGDPTLTFELKEFIKDQLVSIPTAA 986

Query: 180  XXXXXXXXXXXXLVAQLAIAPATTNDPGALLAALL 214
                         VAQ   AP    DPGA+LAALL
Sbjct: 987  THVPTQPAPTSPPVAQPGSAPTALTDPGAMLAALL 1021


>Glyma12g08940.1 
          Length = 407

 Score =  177 bits (449), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 99/159 (62%), Positives = 112/159 (70%), Gaps = 20/159 (12%)

Query: 1   MELSLVPETIPPRAQVQCPLEVINLHPSRDVSVLDFSYKFGNEMVNVKLRVPAVLNKFLQ 60
           MELSLVPETIPPR+QVQCPL++INLHPSRDV+VLDFSYKF N M+  + R+      FLQ
Sbjct: 250 MELSLVPETIPPRSQVQCPLKIINLHPSRDVAVLDFSYKFDNNMLMSRTRL------FLQ 303

Query: 61  P--ITISAEEFFPQWRSLPGPPLKLQEVVRGVRPLPLPEMANLFNSYHLTVCPGLDPNPN 118
                 S   F     S+     +L + VRGVRPLPL E+ANLFNSYHLT CPGLDPNPN
Sbjct: 304 TGQRQTSPSSFCVFTNSVLS---ELIQFVRGVRPLPLLELANLFNSYHLTSCPGLDPNPN 360

Query: 119 NLVISTTFYSESTRAMLCLIRIETDPADRTQLRMTVASG 157
           NLV S TF+SEST AMLCL          T+LRMTVASG
Sbjct: 361 NLVASITFHSESTSAMLCLT---------TELRMTVASG 390