Miyakogusa Predicted Gene

Lj0g3v0073369.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0073369.1 Non Chatacterized Hit- tr|G7KXJ5|G7KXJ5_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,56.52,3e-16,seg,NULL,CUFF.3660.1
         (87 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g42100.1                                                        83   6e-17
Glyma03g39490.1                                                        81   2e-16
Glyma10g29230.1                                                        72   1e-13
Glyma20g38050.1                                                        72   2e-13
Glyma20g38050.2                                                        72   2e-13

>Glyma19g42100.1 
          Length = 417

 Score = 83.2 bits (204), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 50/92 (54%), Positives = 58/92 (63%), Gaps = 6/92 (6%)

Query: 1   MRTPVAXXXXXXXXXXLLGPLAPGTSSSD-NARFVYIPNSVPGPNFQEESHLPSRFHPWE 59
           +RTPVA              LAP  S  D +A FVYIP+   G NFQEE+HLPSRFH WE
Sbjct: 307 IRTPVASSTRRSSSHSGPVQLAPVASPPDQSAGFVYIPSGSSGRNFQEETHLPSRFHAWE 366

Query: 60  RDHSPSLLLNQVG-----RAYHQSASGSDPAM 86
           R+H PSL LN VG     RAYHQ+AS SDP++
Sbjct: 367 REHLPSLALNNVGRESSWRAYHQTASVSDPSI 398


>Glyma03g39490.1 
          Length = 417

 Score = 81.3 bits (199), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 50/92 (54%), Positives = 58/92 (63%), Gaps = 6/92 (6%)

Query: 1   MRTPVAXXXXXXXXXXLLGPLAPGTSSSD-NARFVYIPNSVPGPNFQEESHLPSRFHPWE 59
           +RTPVA              LAP  SS D +A FVYIP+   G NFQEE+HLPSRFH  E
Sbjct: 307 IRTPVASSTRRSSSHSGSVQLAPVASSPDRSAGFVYIPSGSSGHNFQEETHLPSRFHARE 366

Query: 60  RDHSPSLLLNQVG-----RAYHQSASGSDPAM 86
           R+H PSL LN VG     RAYHQ+AS SDP++
Sbjct: 367 REHLPSLPLNHVGRESSWRAYHQTASVSDPSI 398


>Glyma10g29230.1 
          Length = 431

 Score = 72.0 bits (175), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/92 (50%), Positives = 52/92 (56%), Gaps = 7/92 (7%)

Query: 1   MRTPVAXXXXXXXXXXLLGPLAPGTSSSDNAR-FVYIPNSVPGPNFQEESH-LPSRFHPW 58
           MRTP+A              LAP  +S D    F  IP+S  G NFQEE+H LP+ FH W
Sbjct: 320 MRTPIASGTRRSSSHNGPAQLAPMATSPDQGGGFFLIPSSSSGRNFQEENHHLPNHFHAW 379

Query: 59  ERDHSPSLLLNQVG-----RAYHQSASGSDPA 85
           ERDH PSL LN V      RAYHQ+ S SDPA
Sbjct: 380 ERDHLPSLSLNHVDRDSGWRAYHQATSRSDPA 411


>Glyma20g38050.1 
          Length = 439

 Score = 71.6 bits (174), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/93 (49%), Positives = 54/93 (58%), Gaps = 7/93 (7%)

Query: 1   MRTPVAXXXXXXXXXXLLGPLAPGTSSSDNAR-FVYIPNSVPGPNFQEESH-LPSRFHPW 58
           MRTP+A              LAP T+SSD +  F  IP+S  G NFQEE+H LP+ FH W
Sbjct: 328 MRTPIASGTRRSSSHNGSPQLAPITTSSDQSGGFFLIPSSSSGHNFQEENHHLPNHFHAW 387

Query: 59  ERDHSPSLLLNQVG-----RAYHQSASGSDPAM 86
           ERDH PSL L+ V      RAYHQ+ S SDP  
Sbjct: 388 ERDHLPSLSLSHVDRDSGWRAYHQATSRSDPGT 420


>Glyma20g38050.2 
          Length = 435

 Score = 71.6 bits (174), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/93 (49%), Positives = 54/93 (58%), Gaps = 7/93 (7%)

Query: 1   MRTPVAXXXXXXXXXXLLGPLAPGTSSSDNAR-FVYIPNSVPGPNFQEESH-LPSRFHPW 58
           MRTP+A              LAP T+SSD +  F  IP+S  G NFQEE+H LP+ FH W
Sbjct: 324 MRTPIASGTRRSSSHNGSPQLAPITTSSDQSGGFFLIPSSSSGHNFQEENHHLPNHFHAW 383

Query: 59  ERDHSPSLLLNQVG-----RAYHQSASGSDPAM 86
           ERDH PSL L+ V      RAYHQ+ S SDP  
Sbjct: 384 ERDHLPSLSLSHVDRDSGWRAYHQATSRSDPGT 416