Miyakogusa Predicted Gene
- Lj0g3v0073229.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0073229.1 Non Chatacterized Hit- tr|B8AZJ8|B8AZJ8_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,35.29,0.000000003,ZF_RING_2,Zinc finger, RING-type;
ZF_RING_1,Zinc finger, RING-type, conserved site;
RING/U-box,NULL;,CUFF.3642.1
(461 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma12g13270.1 543 e-154
Glyma06g44470.1 508 e-144
Glyma12g33300.1 448 e-126
Glyma13g37120.1 422 e-118
Glyma12g13270.2 348 5e-96
Glyma08g46510.1 132 1e-30
Glyma13g24570.1 123 4e-28
Glyma10g23070.1 115 1e-25
Glyma10g32360.1 50 8e-06
>Glyma12g13270.1
Length = 433
Score = 543 bits (1398), Expect = e-154, Method: Compositional matrix adjust.
Identities = 282/404 (69%), Positives = 309/404 (76%), Gaps = 7/404 (1%)
Query: 59 SDHAPSPEEKSEYLLVRLQEIRKDVQCPICLGIIKKTRTVMECMHRFCRECIDKSMRLGN 118
SD +P PE+KSEY+ V L EIRK+VQCPICLGIIKKTRTVMEC+HRFCRECIDKSMRLGN
Sbjct: 36 SDDSP-PEDKSEYVFVELLEIRKEVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGN 94
Query: 119 NECPACRTHCASRRSLRDDPNFDALIAALYPDIKKYXXXXXXXXXXDKNRNKLIQASIAK 178
NECPACRTHCASRRSLRDDPN+DALIAALYP+I+KY DKNRNK IQASIAK
Sbjct: 95 NECPACRTHCASRRSLRDDPNYDALIAALYPNIEKYEIEELQFCEEDKNRNKQIQASIAK 154
Query: 179 VVQRQSEALVKRRRDTPGAFMTRSQRNQRNVISRRQNPEVDTQGSXXXXXXXXXXXKDSS 238
V QRQSEALVKRRRDTPG+F+TRSQRNQ+NV+SRRQN +D QGS KDSS
Sbjct: 155 VAQRQSEALVKRRRDTPGSFVTRSQRNQQNVLSRRQNQVIDNQGSEDNEDENDNNEKDSS 214
Query: 239 A-DERCTEXXXXXXXXXXXXXXXXXXXXTASPDGGCIESEIGISRENQGVSSRQASKPQK 297
+ DERCTE TASPDGGCIES++ I +SSR SKPQK
Sbjct: 215 STDERCTELRQRRRKRQTRGRPSQPSSSTASPDGGCIESDMDIR-----ISSRPVSKPQK 269
Query: 298 LTWGRGGFRSNTXXXXXXXXXXXXXXXXXLAKLVDYLCNLDENTDEFDIHLMLFPLDRQS 357
LTWG GGFRS+T +AKLVDYL +L+ENTDE D+HL+L LD+QS
Sbjct: 270 LTWGGGGFRSHTRHGSGNGSNSKSSRSSRMAKLVDYLRSLNENTDELDVHLILLSLDKQS 329
Query: 358 TPSLQQPHLVCRPTLSVRHLCEYVACQTPLPVEEVEILAVKRCCSTFCDKSVDEASSFDE 417
TPSLQQPHL CRPTLSV+HLCEYVA QTPLPVEEVEILAVK CCST CDKS DE SS DE
Sbjct: 330 TPSLQQPHLCCRPTLSVKHLCEYVAHQTPLPVEEVEILAVKGCCSTVCDKSFDETSSSDE 389
Query: 418 LTPLVIDPSKDELETLQGHEPLTGIKSNCISQRGHLMLAYRRKE 461
LT LVIDPSKDELETLQGHE L GIKS CIS+R HL+LAYRRKE
Sbjct: 390 LTTLVIDPSKDELETLQGHESLAGIKSKCISKREHLILAYRRKE 433
>Glyma06g44470.1
Length = 463
Score = 508 bits (1308), Expect = e-144, Method: Compositional matrix adjust.
Identities = 263/376 (69%), Positives = 284/376 (75%), Gaps = 6/376 (1%)
Query: 87 ICLGIIKKTRTVMECMHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNFDALIAA 146
I GIIKKTRTVMEC+HRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPN+DALIAA
Sbjct: 93 ILFGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAA 152
Query: 147 LYPDIKKYXXXXXXXXXXDKNRNKLIQASIAKVVQRQSEALVKRRRDTPGAFMTRSQRNQ 206
LYP+I+KY DKNRNK IQASIAKVVQRQSEALVKRRRDTPG+F+TRSQRNQ
Sbjct: 153 LYPNIEKYEQEELEFREEDKNRNKQIQASIAKVVQRQSEALVKRRRDTPGSFVTRSQRNQ 212
Query: 207 RNVISRRQNPEVDTQGSXXXXXXXXXXXKDSSA-DERCTEXXXXXXXXXXXXXXXXXXXX 265
RNV+SRRQN +D QGS KDSS+ DERCTE
Sbjct: 213 RNVLSRRQNQGMDNQGSEDNEEENDNNEKDSSSTDERCTELRQRRRKRRTRGRPSQPSSS 272
Query: 266 TASPDGGCIESEIGISRENQGVSSRQASKPQKLTWGRGGFRSNTXXXXXXXXXXXXXXXX 325
TASPDGGCIES++ I +SSR SKPQKLTWGRGGFRS+T
Sbjct: 273 TASPDGGCIESDMDIR-----ISSRLVSKPQKLTWGRGGFRSHTRHGSGNGSNSKSSRSS 327
Query: 326 XLAKLVDYLCNLDENTDEFDIHLMLFPLDRQSTPSLQQPHLVCRPTLSVRHLCEYVACQT 385
LAKLVDYL +L+ENTDE D+HL+L LD+Q TPSLQQPHL CRPTLSV+HLCEYVA QT
Sbjct: 328 RLAKLVDYLHSLNENTDELDVHLILLSLDKQITPSLQQPHLCCRPTLSVKHLCEYVAHQT 387
Query: 386 PLPVEEVEILAVKRCCSTFCDKSVDEASSFDELTPLVIDPSKDELETLQGHEPLTGIKSN 445
PL VEEVEILAVK CCST CDKS DE SS DELT LVIDPSKDELETLQGHE L GIKS
Sbjct: 388 PLLVEEVEILAVKGCCSTVCDKSFDETSSSDELTTLVIDPSKDELETLQGHESLAGIKSK 447
Query: 446 CISQRGHLMLAYRRKE 461
CIS+R HL+LAYRRKE
Sbjct: 448 CISKREHLILAYRRKE 463
>Glyma12g33300.1
Length = 365
Score = 448 bits (1153), Expect = e-126, Method: Compositional matrix adjust.
Identities = 235/366 (64%), Positives = 269/366 (73%), Gaps = 6/366 (1%)
Query: 99 MECMHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNFDALIAALYPDIKKYXXXX 158
MEC+HRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPN+DALIAALYPDI+KY
Sbjct: 1 MECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAALYPDIEKYEQEE 60
Query: 159 XXXXXXDKNRNKLIQASIAKVVQRQSEALVKRRRDTPGAFMTRSQRNQRNVISRRQNPEV 218
+KNRNK IQASIAKVVQRQSEALVKRR+DTPGAF+TR QRNQRN+ SRRQ +
Sbjct: 61 LEFREEEKNRNKQIQASIAKVVQRQSEALVKRRKDTPGAFVTRPQRNQRNIHSRRQTQAI 120
Query: 219 DTQGSXXXXXXXXXXXKD-SSADERCTEXXXXXXXXXXXXXXXXXXXXTASPDGGCIESE 277
+GS KD SSADER TE ASPDGGC +S+
Sbjct: 121 --EGSEDNEEENDNNEKDSSSADERSTEHRQRRRKRWARVRPSQPSSSMASPDGGCNDSD 178
Query: 278 IGISRENQGVSSRQASKPQKLTWGRGGFRSNTXXXXXXXXXXXXXXXXXLAKLVDYLCNL 337
+ IS+EN+G+ SRQ SK KLTWGRGGFRSNT L+K VD+L NL
Sbjct: 179 MDISKENRGI-SRQVSKHGKLTWGRGGFRSNTRHGSGGGSNNKSSRSSRLSKFVDHLRNL 237
Query: 338 DENTDEFDIHLMLFPLDRQSTPSLQQPHLVCRPTLSVRHLCEYVACQTPLPVEEVEILAV 397
DENTDEFD+HLML LD+ STPSLQQP+L CRPTLSV+HL E+VA QTPLPVE +EI+AV
Sbjct: 238 DENTDEFDVHLMLVSLDQLSTPSLQQPYLCCRPTLSVKHLYEHVARQTPLPVEGIEIVAV 297
Query: 398 KRCCSTFCDKSVDEAS--SFDELTPLVIDPSKDELETLQGHEPLTGIKSNCISQRGHLML 455
K CCST CDKS DE S ++DEL+ LVIDP KDELE LQGHE L G++S CIS+ GHL++
Sbjct: 298 KGCCSTNCDKSADENSALAYDELSKLVIDPHKDELEILQGHETLAGLRSKCISKMGHLII 357
Query: 456 AYRRKE 461
AY++KE
Sbjct: 358 AYKQKE 363
>Glyma13g37120.1
Length = 385
Score = 422 bits (1086), Expect = e-118, Method: Compositional matrix adjust.
Identities = 239/387 (61%), Positives = 276/387 (71%), Gaps = 11/387 (2%)
Query: 78 EIRKDVQCPICLGIIKKTRTVMECMHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDD 137
E+ +D+ I IIKKTRTVMEC+HRFCRECIDKSMRLGNNECPACRTHCASRRSLRDD
Sbjct: 5 EVNRDM---IAYCIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDD 61
Query: 138 PNFDALIAALYPDIKKYXXXXXXXXXXDKNRNKLIQASIAKVVQRQSEALVKRRRDTPGA 197
PN+DALI+ALYPDI+KY +KNRNK IQASIAKVVQRQSEALVKRR+DTPG
Sbjct: 62 PNYDALISALYPDIEKYEEEELEFREEEKNRNKQIQASIAKVVQRQSEALVKRRKDTPGT 121
Query: 198 FMTRSQRNQRNVISRRQNPEVDTQGSXXXXXXXXXXXKDSSA-DERCTEXXXXXXXXXXX 256
F+TRSQRNQRN + +GS K+SS+ DER TE
Sbjct: 122 FVTRSQRNQRNRRQTQA-----IEGSEDNEEENDNNEKNSSSDDERSTEHRQRRRKRWAR 176
Query: 257 XXXXXXXXXTASPDGGCIESEIGISRENQGVSSRQASKPQKLTWGRGGFRSNTXXXXXXX 316
SPDGGC +S++ ISREN+G+SSRQ SK KLTWGRGGFRSNT
Sbjct: 177 VRSSQPSSSMTSPDGGCNDSDMDISRENRGISSRQVSKHGKLTWGRGGFRSNTRHGSGGS 236
Query: 317 XXXXXXXXXXLAKLVDYLCNLDENTDEFDIHLMLFPLDRQSTPSLQQPHLVCRPTLSVRH 376
L+K VD+L NLDENTDEFD+HLML LD+QST SLQQP+L CRPTLSVRH
Sbjct: 237 SNSKSSRSSRLSKFVDHLRNLDENTDEFDVHLMLVSLDQQSTSSLQQPYLCCRPTLSVRH 296
Query: 377 LCEYVACQTPLPVEEVEILAVKRCCSTFCDKSVDEAS--SFDELTPLVIDPSKDELETLQ 434
L E+VA QT LPVE +EILAVK CCST DKS +E S ++DEL+ LVIDP KDELE LQ
Sbjct: 297 LYEHVARQTHLPVEGIEILAVKGCCSTNRDKSTNENSDLAYDELSTLVIDPHKDELEILQ 356
Query: 435 GHEPLTGIKSNCISQRGHLMLAYRRKE 461
GHE L+G++S CIS+ GHL++AY +KE
Sbjct: 357 GHETLSGLRSKCISKMGHLIIAYNQKE 383
>Glyma12g13270.2
Length = 344
Score = 348 bits (894), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 186/292 (63%), Positives = 207/292 (70%), Gaps = 7/292 (2%)
Query: 59 SDHAPSPEEKSEYLLVRLQEIRKDVQCPICLGIIKKTRTVMECMHRFCRECIDKSMRLGN 118
SD +P PE+KSEY+ V L EIRK+VQCPICLGIIKKTRTVMEC+HRFCRECIDKSMRLGN
Sbjct: 36 SDDSP-PEDKSEYVFVELLEIRKEVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGN 94
Query: 119 NECPACRTHCASRRSLRDDPNFDALIAALYPDIKKYXXXXXXXXXXDKNRNKLIQASIAK 178
NECPACRTHCASRRSLRDDPN+DALIAALYP+I+KY DKNRNK IQASIAK
Sbjct: 95 NECPACRTHCASRRSLRDDPNYDALIAALYPNIEKYEIEELQFCEEDKNRNKQIQASIAK 154
Query: 179 VVQRQSEALVKRRRDTPGAFMTRSQRNQRNVISRRQNPEVDTQGSXXXXXXXXXXXKDSS 238
V QRQSEALVKRRRDTPG+F+TRSQRNQ+NV+SRRQN +D QGS KDSS
Sbjct: 155 VAQRQSEALVKRRRDTPGSFVTRSQRNQQNVLSRRQNQVIDNQGSEDNEDENDNNEKDSS 214
Query: 239 A-DERCTEXXXXXXXXXXXXXXXXXXXXTASPDGGCIESEIGISRENQGVSSRQASKPQK 297
+ DERCTE TASPDGGCIES++ I +SSR SKPQK
Sbjct: 215 STDERCTELRQRRRKRQTRGRPSQPSSSTASPDGGCIESDMDIR-----ISSRPVSKPQK 269
Query: 298 LTWGRGGFRSNTXXXXXXXXXXXXXXXXXLAKLVDYLCNLDENTDEFDIHLM 349
LTWG GGFRS+T +AKLVDYL +L+ENTDE I
Sbjct: 270 LTWGGGGFRSHTRHGSGNGSNSKSSRSSRMAKLVDYLRSLNENTDEMSISFF 321
>Glyma08g46510.1
Length = 360
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 61/101 (60%), Positives = 72/101 (71%)
Query: 90 GIIKKTRTVMECMHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNFDALIAALYP 149
GII+ TR VMECMHRFCR+CI+KS RLGNNECPACRTHC+SRRSLR+DPNFD LI LY
Sbjct: 16 GIIRNTRVVMECMHRFCRDCIEKSFRLGNNECPACRTHCSSRRSLREDPNFDNLIGLLYS 75
Query: 150 DIKKYXXXXXXXXXXDKNRNKLIQASIAKVVQRQSEALVKR 190
+I KY K + +Q + AK +RQS AL K+
Sbjct: 76 NIDKYEEEELNLSEDTKKSMQRMQKAYAKTYERQSIALGKK 116
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 83/169 (49%), Gaps = 17/169 (10%)
Query: 293 SKPQKLTWGRGGFRSNTXXXXXXXXXXXXXXXXXLAKLVDYLCNLDENTDEFDIHLMLFP 352
S KL WG+ + +A+ +D+L EN DE DI + L
Sbjct: 197 SSADKLVWGKS---AQRSNNRSNSRNVAALRSNRIARFIDHLKVSQENDDELDIFIKLVS 253
Query: 353 LDRQSTPSLQQPHLVCRPTLSVRHLCEYVACQTPLPVEEVEILAVKRCCSTFCDKSVDEA 412
+ + P+L +P+L CRPTLS++ LC+YVA +T L EE+E+ VK C D
Sbjct: 254 FEEKRVPNLPRPYLSCRPTLSIKQLCQYVALETSLQTEEIELYLVKEC-------QPDII 306
Query: 413 SSFDELTPLVIDPSKDELETLQGHE-PLTGIKSNCISQRGHLMLAYRRK 460
S +L D ++ E L E + +K+N +S GHL++AY+RK
Sbjct: 307 SGDGKL-----DEDNNKFEFLAEEEVTMAQLKTNNLS-FGHLVIAYKRK 349
>Glyma13g24570.1
Length = 226
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 53/72 (73%), Positives = 60/72 (83%)
Query: 83 VQCPICLGIIKKTRTVMECMHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNFDA 142
V IC GI++KT+ VMECMHRFC +CI+KSMRL NNECP CR HC SRRSLRDDPNFD
Sbjct: 2 VDSAICEGILRKTKAVMECMHRFCGKCIEKSMRLSNNECPVCRVHCPSRRSLRDDPNFDN 61
Query: 143 LIAALYPDIKKY 154
+IAA+YPDI KY
Sbjct: 62 IIAAIYPDIDKY 73
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 61/111 (54%), Gaps = 12/111 (10%)
Query: 344 FDIHLMLFPLDRQSTPSLQQPHLVCRPTLSVRHLCEYVACQTPLPVEEVEILAVKRCCST 403
DI L+L LD Q P+LQ+P+L CRPT SV+ LC+YVA + L EVE+
Sbjct: 126 LDIPLVLVSLDEQKMPTLQEPYLHCRPTCSVKILCKYVALKVELLPNEVEL--------- 176
Query: 404 FCDKSVDEASSFDELTPLVIDPSKDELETLQGHEPLTGIKSNCISQRGHLM 454
V+E+ + L++DP+KD+L L+ E L + ++ GHL+
Sbjct: 177 ---SLVEESQTNVMRDELIVDPNKDKLRVLRDEETLADLYKPNVTNCGHLV 224
>Glyma10g23070.1
Length = 67
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 51/65 (78%), Positives = 57/65 (87%)
Query: 87 ICLGIIKKTRTVMECMHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNFDALIAA 146
+C GII+KTR VMECMHRFC+ECI+KSMRLGNNECP CRTH ASRRSLR D NFD LI+
Sbjct: 1 LCAGIIRKTRAVMECMHRFCKECIEKSMRLGNNECPVCRTHVASRRSLRHDQNFDTLISL 60
Query: 147 LYPDI 151
LYPD+
Sbjct: 61 LYPDM 65
>Glyma10g32360.1
Length = 428
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Query: 83 VQCPICLGIIKKTRTVMECMHRFCRECIDKSM---RLGNNECPACR--THCASRRSLRDD 137
V CP+C + T+ EC H FCREC+DK + +L CP C C+ LR D
Sbjct: 31 VTCPLCNKFFRNATTISECCHSFCRECVDKKLIDEKL--KHCPICNRDLGCSPHDKLRPD 88
Query: 138 PNFDALIAALYP 149
P L ++P
Sbjct: 89 PCLQDLRDKIFP 100