Miyakogusa Predicted Gene
- Lj0g3v0073129.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0073129.3 Non Chatacterized Hit- tr|B8BA98|B8BA98_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,41.46,2e-18,9-CIS-EPOXYCAROTENOID DIOXYGENASE,NULL;
BETA-CAROTENE DIOXYGENASE,Carotenoid oxygenase;
RPE65,Carote,CUFF.3638.3
(182 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma04g08860.1 164 6e-41
Glyma13g27220.4 54 9e-08
Glyma13g27220.1 54 1e-07
Glyma13g27220.3 54 1e-07
Glyma13g27220.2 54 1e-07
>Glyma04g08860.1
Length = 347
Score = 164 bits (414), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 80/135 (59%), Positives = 96/135 (71%), Gaps = 12/135 (8%)
Query: 60 LRFGKANKYLSNTSVFEHSGKFYSAAEIHIPQEIDIFTLKTLNNWDVNGAWDRPFTSHPK 119
LRFG+ NK SNT+VFEHSGKFYS +E H+PQEIDI+TL TL WDVNGA +RPF SHPK
Sbjct: 1 LRFGQLNKDYSNTNVFEHSGKFYSVSENHMPQEIDIYTLSTLKYWDVNGACNRPFASHPK 60
Query: 120 KAPGTGELVTLGVAPAKPFVVVGIFSADGNKLIHKVDLKLN------------RYNVIID 167
K PGTGELV GV KP++ +GI SADG +L+HK D+KL+ RY I+D
Sbjct: 61 KVPGTGELVIFGVDATKPYLEIGIVSADGKELVHKEDIKLDRCSLCHDIGITSRYIAILD 120
Query: 168 FPPTIDLNRLLRGGP 182
P +D NRLL+ GP
Sbjct: 121 LPLIVDSNRLLKRGP 135
>Glyma13g27220.4
Length = 440
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 70 SNTSVFEHSGKFYSAAEIHIPQEIDIFT---LKTLNNWDVNGAWDRPFTSHPKKAPGTGE 126
+NT++ H GK + +E P I +F L+TL D + FT+HPK P TGE
Sbjct: 71 ANTALVYHHGKLLALSEADKPYAIKVFEDGDLQTLGMLDYDKRLGHSFTAHPKVDPFTGE 130
Query: 127 LVTLGVAPAKPFVVVGIFSADG 148
+ T G A P++ + S DG
Sbjct: 131 MFTFGYAHTPPYITYRVISKDG 152
>Glyma13g27220.1
Length = 574
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 70 SNTSVFEHSGKFYSAAEIHIPQEIDIFT---LKTLNNWDVNGAWDRPFTSHPKKAPGTGE 126
+NT++ H GK + +E P I +F L+TL D + FT+HPK P TGE
Sbjct: 174 ANTALVYHHGKLLALSEADKPYAIKVFEDGDLQTLGMLDYDKRLGHSFTAHPKVDPFTGE 233
Query: 127 LVTLGVAPAKPFVVVGIFSADG 148
+ T G A P++ + S DG
Sbjct: 234 MFTFGYAHTPPYITYRVISKDG 255
>Glyma13g27220.3
Length = 548
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 70 SNTSVFEHSGKFYSAAEIHIPQEIDIFT---LKTLNNWDVNGAWDRPFTSHPKKAPGTGE 126
+NT++ H GK + +E P I +F L+TL D + FT+HPK P TGE
Sbjct: 179 ANTALVYHHGKLLALSEADKPYAIKVFEDGDLQTLGMLDYDKRLGHSFTAHPKVDPFTGE 238
Query: 127 LVTLGVAPAKPFVVVGIFSADG 148
+ T G A P++ + S DG
Sbjct: 239 MFTFGYAHTPPYITYRVISKDG 260
>Glyma13g27220.2
Length = 543
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 70 SNTSVFEHSGKFYSAAEIHIPQEIDIFT---LKTLNNWDVNGAWDRPFTSHPKKAPGTGE 126
+NT++ H GK + +E P I +F L+TL D + FT+HPK P TGE
Sbjct: 174 ANTALVYHHGKLLALSEADKPYAIKVFEDGDLQTLGMLDYDKRLGHSFTAHPKVDPFTGE 233
Query: 127 LVTLGVAPAKPFVVVGIFSADG 148
+ T G A P++ + S DG
Sbjct: 234 MFTFGYAHTPPYITYRVISKDG 255