Miyakogusa Predicted Gene

Lj0g3v0072759.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0072759.1 Non Chatacterized Hit- tr|I1LLV5|I1LLV5_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,66.83,0,seg,NULL;
GIY-YIG,UvrABC system subunit C, N-terminal; FAMILY NOT NAMED,NULL;
coiled-coil,NULL,CUFF.3596.1
         (401 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g30050.1                                                       469   e-132
Glyma18g06170.1                                                       466   e-131
Glyma09g36020.1                                                        52   9e-07

>Glyma11g30050.1 
          Length = 380

 Score =  469 bits (1208), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 240/376 (63%), Positives = 275/376 (73%), Gaps = 44/376 (11%)

Query: 40  FFACYLLASLNPRFKGHTYIGFTVNPRRRIRQHNGEIGCGAWRTKKRRPWEMVLCIYGFP 99
           FFACYLL SL+PRFKGHTYIGFTVNPRRRIRQHNGEIGCGAWRTKKRRPWEMVLCIYGFP
Sbjct: 35  FFACYLLTSLSPRFKGHTYIGFTVNPRRRIRQHNGEIGCGAWRTKKRRPWEMVLCIYGFP 94

Query: 100 TNVSALQFEWAWQHPVESLAVRKAAVNFKSLSGIANKIKLAYTMLTLPSWENMNMTVHFF 159
           TNVSALQFEWAWQHPVESLAVRKAAV FKSLSGIANKIKLAYTMLTLPSW++MN+TV+FF
Sbjct: 95  TNVSALQFEWAWQHPVESLAVRKAAVEFKSLSGIANKIKLAYTMLTLPSWQSMNITVNFF 154

Query: 160 STKYMKHCGGCPNLPEHMKVETGSMDELPCYTERIDGLSENEDD----VEF-ENNASTSG 214
           STKYMKHC GCP+LP HMK + GS+DELPCY + IDGLSENEDD    V+F +NN STSG
Sbjct: 155 STKYMKHCAGCPSLPVHMKTKFGSLDELPCYNKGIDGLSENEDDTIDEVQFDDNNISTSG 214

Query: 215 SVPVASDDSLTLDSPKSPNHWDRISEAFGGSKESEAREPP-GHPSTTENPSLSFGLITTT 273
           SVP  SDD +T DSP++PN  D+ISEAF  +KESEAREPP G+   ++  S  F   T  
Sbjct: 215 SVPDVSDDLVTPDSPQNPNDGDKISEAFEWNKESEAREPPLGNSFASQEQSQLFSSTTPL 274

Query: 274 PVKSSPVASSKRVGTITENPSQSFGFIXXXXXXXXXXXXXXRVEIIEDADLLNVMNKSDG 333
            +KSS   S +                              R EIIE+ D ++VMNKSD 
Sbjct: 275 TMKSSSTTSLQ------------------------------RAEIIEEDDFMSVMNKSDA 304

Query: 334 ELSQPESVKSDAV--------DVNSTFIVPHEAEIVDLSTPSPSWRNIIDXXXXXXXXXX 385
           +LSQPE  +S A         DV  TF+VPHE EI+DLSTPSPS R+++D          
Sbjct: 305 DLSQPEPEQSGATTLVANKNRDVGRTFVVPHETEIIDLSTPSPSCRSVLDRKKRRVSSSV 364

Query: 386 GSNFIDLTKSPNFVQL 401
           G++FIDLT SPNF++L
Sbjct: 365 GTDFIDLTNSPNFIEL 380


>Glyma18g06170.1 
          Length = 368

 Score =  466 bits (1198), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 236/373 (63%), Positives = 273/373 (73%), Gaps = 42/373 (11%)

Query: 40  FFACYLLASLNPRFKGHTYIGFTVNPRRRIRQHNGEIGCGAWRTKKRRPWEMVLCIYGFP 99
           FFACYLL SL+PR+KGHTYIGFTVNPRRRIRQHNGEIGCGAWRT+KRRPWEMVLCIYGFP
Sbjct: 27  FFACYLLTSLSPRYKGHTYIGFTVNPRRRIRQHNGEIGCGAWRTRKRRPWEMVLCIYGFP 86

Query: 100 TNVSALQFEWAWQHPVESLAVRKAAVNFKSLSGIANKIKLAYTMLTLPSWENMNMTVHFF 159
           TNVSALQFEWAWQHPVESLAVRKAAV FKSLSGIANKIKLAYTMLTLPSW++MN+TV+FF
Sbjct: 87  TNVSALQFEWAWQHPVESLAVRKAAVEFKSLSGIANKIKLAYTMLTLPSWQSMNITVNFF 146

Query: 160 STKYMKHCGGCPNLPEHMKVETGSMDELPCYTERIDGLSENEDD----VEFENNASTSGS 215
           STKYMKHC GCP+LP HMK + GS+DELPCY E IDGLSENEDD    VEF NN STSGS
Sbjct: 147 STKYMKHCAGCPSLPAHMKTKFGSLDELPCYNEGIDGLSENEDDNIDEVEFNNNTSTSGS 206

Query: 216 VPVASDDSLTLDSPKSPNHWDRISEAFGGSKESEAREPPGHPSTTENPSLSFGLITTTPV 275
           VP   DD +T DSP++PNH D+ISEAF  +KESE R+P G+  +++  S  F   T   +
Sbjct: 207 VPDVGDDFVTPDSPENPNHRDKISEAFEWNKESEVRQPLGNSFSSQEQSQPFSSTTPLTM 266

Query: 276 KSSPVASSKRVGTITENPSQSFGFIXXXXXXXXXXXXXXRVEIIEDADLLNVMNKSDGEL 335
           KSS   S                                RV+IIED D ++V+NKS  +L
Sbjct: 267 KSSSTTS------------------------------LHRVDIIED-DFMSVINKSGADL 295

Query: 336 SQPESVKSDAV-------DVNSTFIVPHEAEIVDLSTPSPSWRNIIDXXXXXXXXXXGSN 388
            QPE  +S A        D++ TF+VP+EAEI+DLSTPSPS R+++D          G++
Sbjct: 296 IQPEPEQSGATSAANKNHDISHTFVVPNEAEIIDLSTPSPSCRSVLDRKKRRVSSSVGTD 355

Query: 389 FIDLTKSPNFVQL 401
           FIDLT SPNFVQL
Sbjct: 356 FIDLTNSPNFVQL 368


>Glyma09g36020.1 
          Length = 173

 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 2/72 (2%)

Query: 41  FACYLLASLNPRFKGHTYIGFTVNPRRRIRQHNGEIGCGAWRTKKRRPWEMVLCIYGFPT 100
           ++ YL+ S N   K  TY+G T N  RR++QHNGE+  GA  ++  RPW     I GF  
Sbjct: 49  WSVYLILSTNHPIK--TYVGITNNFPRRLKQHNGELKGGAKASRAGRPWICACIICGFTD 106

Query: 101 NVSALQFEWAWQ 112
              A  FE  W+
Sbjct: 107 RSEASVFESKWK 118