Miyakogusa Predicted Gene

Lj0g3v0072069.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0072069.1 Non Chatacterized Hit- tr|K3ZMT6|K3ZMT6_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si027906,25.74,0.000000002,coiled-coil,NULL,gene.g5248.t1.1
         (286 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g33310.1                                                       274   7e-74

>Glyma16g33310.1 
          Length = 311

 Score =  274 bits (701), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 155/298 (52%), Positives = 206/298 (69%), Gaps = 22/298 (7%)

Query: 2   VAVAPLPEKPQFDRKLTEELNTLLS-QSKGGVVGLAQFLDAAITTQKIALDSLVNISCID 60
            AVAPLP   QF R+L  EL  L    + GG  G+AQ LDAAITTQKIAL+SL  +S + 
Sbjct: 23  AAVAPLPATTQFSRELAAELTALQPIGTTGGEHGMAQLLDAAITTQKIALNSLAQVSYLA 82

Query: 61  GADRGGVEKYLEDNTELLDSCNYFLEKMEGINKYVDTLRVVAHLVDDSKPNSVAAKRALE 120
             DRG +E+YLE NT++LD+CNYF+E++E + KYV++LR+VAH   ++  +     RAL+
Sbjct: 83  DVDRGAMEEYLETNTDILDACNYFVERIEDMKKYVESLRIVAHSCTNATTS-----RALD 137

Query: 121 LLESC---EKRCRVMGRKKKNSGSCLKK-LLRQKY-EKTDLGEIMCGSKAMALMCCSFLE 175
            LESC   EKR + MG++    GSCL+K LLRQK  +K++  EI+CGSK MAL+ C  LE
Sbjct: 138 KLESCHGIEKRLKTMGKR----GSCLRKTLLRQKLGQKSEFSEIVCGSKVMALISCFSLE 193

Query: 176 TGLSFESKSGLVSVKQSQPVRSSWLRLLEEMA-----KQSSLLTIDELQQTVTAARELKV 230
             LSF+   G   + +  P+  SWLR+++++      K+ S  ++ ELQQTV AARELK 
Sbjct: 194 HALSFDCSRGGFPMMKCHPMNCSWLRIMQDLVEGSGEKKKSRRSMIELQQTVDAARELKE 253

Query: 231 HMKGKREKEM--KSAVERLKKRCRGLEDGIEIIEGRVKDLYRSLIDVRMALLGILSQA 286
            +KGKREK+M   S VER+K+ C  LE G+  IEG+V+DLY+SLIDVRMALLGILSQA
Sbjct: 254 QIKGKREKQMVEYSCVERVKRSCGDLEGGLGFIEGKVRDLYKSLIDVRMALLGILSQA 311