Miyakogusa Predicted Gene
- Lj0g3v0070689.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0070689.2 tr|A8CF51|A8CF51_BRACM AP2/EREBP transcription
factor OS=Brassica campestris GN=BcAP2 PE=2 SV=1,32.65,5e-19,seg,NULL;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.3433.2
(232 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma01g02760.1 95 6e-20
Glyma08g38190.1 92 4e-19
Glyma09g33240.1 87 2e-17
Glyma11g14040.2 50 2e-06
Glyma12g06010.1 50 2e-06
Glyma17g07010.1 50 2e-06
Glyma13g00950.1 50 2e-06
Glyma18g47980.1 49 4e-06
>Glyma01g02760.1
Length = 507
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 110/256 (42%), Gaps = 44/256 (17%)
Query: 1 MAGATNWLTFSLTPMEIMLRSSSTDSQFLQYDTA---SSSHCFLDNFYANVLTNPK---S 54
MA ATNWL+FSL+PME MLR+S + QFLQYD A SS H +LDN Y N N
Sbjct: 1 MARATNWLSFSLSPME-MLRTS--EPQFLQYDAASATSSHHYYLDNLYTNGWGNGSLKFE 57
Query: 55 EMLNQNEMQRVTEGSILTSLMDDSSPPQIENQPPMAVVSKLEDFFESHQGEVMQXXXXXX 114
+ LN +++ V +SS + + PP KLEDF VM+
Sbjct: 58 QNLNHSDVSFV-----------ESSSQSVGHVPPPP--PKLEDFL-GDSSAVMRYSDSQT 103
Query: 115 XXXXQIYEHV----------PPPPGFFNG-EQDLKAAVDVAA---EFRAKLDDSVEIPKN 160
H+ +F G +QDLKA A +++DDS I K
Sbjct: 104 ETQDSSLTHIYDHHHHHHHHHGSTSYFGGDQQDLKAITGFQAFSTNSGSEVDDSASIGK- 162
Query: 161 DVVPGGEFGVNSAEGNKDE----TLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTFGQ 216
EFG +S E + +E + TFGQ
Sbjct: 163 --AQASEFGTHSIESSGNEFAAFSGGTTGTLSLAVALSSEKAVVAAESNSSKKIVDTFGQ 220
Query: 217 RTSIYRGVTRHRWTGR 232
RTSIYRGVTRHRWTGR
Sbjct: 221 RTSIYRGVTRHRWTGR 236
>Glyma08g38190.1
Length = 400
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 96/243 (39%), Gaps = 78/243 (32%)
Query: 1 MAGATNWLTFSLTPMEIMLRSSSTDSQFLQYDTASSSHCFLD-NFYANVLTNPKSEMLNQ 59
MAGATNWLTFSLT ME+ QF YDT + SHCF D NFY TN KS M +Q
Sbjct: 1 MAGATNWLTFSLTHMEMQ--------QFGPYDTTTHSHCFNDSNFYG--WTNSKSVMDSQ 50
Query: 60 NEMQRVTEGSILTSLMDDSSPPQIENQPPMAVVSKLEDFFESHQGEVMQXXXXXXXXXXQ 119
+E Q++ V K+EDF+
Sbjct: 51 SETQQL-------------------------AVPKMEDFY-------------------- 65
Query: 120 IYEHVPPPPGFFNGEQDLKAAVDVAAEFRA--------KLDDSVEIPK-NDVVPGGEFGV 170
F + +QDLKA + F+A ++DDS V P G
Sbjct: 66 ----------FGDHQQDLKAM--IVPGFKALSGTNSGSEVDDSTSNKTVTRVAPAALGGA 113
Query: 171 NSAEGN-KDETLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTFGQRTSIYRGVTRHRW 229
+S E N K L HTFGQRTSIYRGVTRHRW
Sbjct: 114 HSGESNCKGSALTLCDVAANGSDDSNNKAVVAVGFDTRKKVAHTFGQRTSIYRGVTRHRW 173
Query: 230 TGR 232
TGR
Sbjct: 174 TGR 176
>Glyma09g33240.1
Length = 509
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 102/251 (40%), Gaps = 42/251 (16%)
Query: 4 ATNWLTFSLTPMEIMLRSSSTDSQFLQYDTA---SSSHCFLDNFYANVLTNPKSEMLNQN 60
+TNWL+FSL+PM+ MLR + + QF+QYD A SS H +LDN Y N N S QN
Sbjct: 5 STNWLSFSLSPMD-MLR--TPEPQFVQYDAASDTSSHHYYLDNLYTNGWGN-GSLKFEQN 60
Query: 61 EMQRVTEGSILTSLMDDSSPPQIENQPPMAVVSKLEDFFESHQGEVMQXXXXXXXXXXQI 120
+S +PP KLEDF VM+
Sbjct: 61 LNHSDVSFVQSSSQSVSHAPP------------KLEDFL-GDSSAVMRYSDSQTETQDSS 107
Query: 121 YEHV--------PPPPGFFNGE-QDLKAAVDVAA---EFRAKLDDSVEIPKNDVVPGGEF 168
H+ +F G+ QDLKA A +++DDS I K G EF
Sbjct: 108 LTHIYDHHHHHHHGSSAYFGGDHQDLKAITGFQAFSTNSGSEVDDSASIGK---AQGSEF 164
Query: 169 GVNSAEGNKDE-------TLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTFGQRTSIY 221
G +S E + +E T TFGQRTSIY
Sbjct: 165 GTHSIESSVNEFAAFSGGTNTGGTLSLAVAQSSEKAVAAAAESDRSKKVVDTFGQRTSIY 224
Query: 222 RGVTRHRWTGR 232
RGVTRHRWTGR
Sbjct: 225 RGVTRHRWTGR 235
>Glyma11g14040.2
Length = 562
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/20 (100%), Positives = 20/20 (100%)
Query: 213 TFGQRTSIYRGVTRHRWTGR 232
TFGQRTSIYRGVTRHRWTGR
Sbjct: 162 TFGQRTSIYRGVTRHRWTGR 181
>Glyma12g06010.1
Length = 553
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/20 (100%), Positives = 20/20 (100%)
Query: 213 TFGQRTSIYRGVTRHRWTGR 232
TFGQRTSIYRGVTRHRWTGR
Sbjct: 157 TFGQRTSIYRGVTRHRWTGR 176
>Glyma17g07010.1
Length = 530
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/20 (100%), Positives = 20/20 (100%)
Query: 213 TFGQRTSIYRGVTRHRWTGR 232
TFGQRTSIYRGVTRHRWTGR
Sbjct: 144 TFGQRTSIYRGVTRHRWTGR 163
>Glyma13g00950.1
Length = 528
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/20 (100%), Positives = 20/20 (100%)
Query: 213 TFGQRTSIYRGVTRHRWTGR 232
TFGQRTSIYRGVTRHRWTGR
Sbjct: 140 TFGQRTSIYRGVTRHRWTGR 159
>Glyma18g47980.1
Length = 616
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/20 (100%), Positives = 20/20 (100%)
Query: 213 TFGQRTSIYRGVTRHRWTGR 232
TFGQRTSIYRGVTRHRWTGR
Sbjct: 208 TFGQRTSIYRGVTRHRWTGR 227