Miyakogusa Predicted Gene
- Lj0g3v0070429.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0070429.1 tr|I3SMT5|I3SMT5_LOTJA Superoxide dismutase
[Cu-Zn] OS=Lotus japonicus PE=2 SV=1,99.38,0,Cu,Zn superoxide
dismutase-like,Superoxide dismutase, copper/zinc binding domain;
SOD_CU_ZN_1,Supero,CUFF.3525.1
(160 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma16g27020.2 273 6e-74
Glyma16g27020.1 266 5e-72
Glyma03g40280.3 206 7e-54
Glyma03g40280.1 206 7e-54
Glyma19g42890.2 201 3e-52
Glyma19g42890.1 201 3e-52
Glyma11g19840.2 187 5e-48
Glyma12g08650.1 181 2e-46
Glyma11g19840.3 181 4e-46
Glyma11g19840.1 179 9e-46
Glyma12g30260.1 173 8e-44
Glyma19g42890.3 137 5e-33
Glyma03g40280.2 118 2e-27
Glyma05g04170.1 59 2e-09
>Glyma16g27020.2
Length = 160
Score = 273 bits (698), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 134/160 (83%), Positives = 147/160 (91%)
Query: 1 MESTKGTVKGVALINGDNSIRGSIQFVQHPSGITHVTGRITGLTPGLHGFHIHALGDTTN 60
ME+ KGTVKGVA+I GDN+IRGS+QF+QHP+G THVTGR+TGL+ G HGFHIHA GDTTN
Sbjct: 1 MEAAKGTVKGVAIIIGDNNIRGSLQFLQHPNGTTHVTGRVTGLSQGFHGFHIHAFGDTTN 60
Query: 61 GCNSTGPHFNPLKKNHGAPSDEERHAGDLGNIAVGHDGVAEISISDVHIPLSGVHSILGR 120
GCNSTGPHFNP KK+HGAPSD++RHAGDLGNIA G DGVAEISI D IPL+GVHSI+GR
Sbjct: 61 GCNSTGPHFNPFKKDHGAPSDDKRHAGDLGNIAAGPDGVAEISIRDRQIPLTGVHSIIGR 120
Query: 121 AVVVHADPDDLGRGGHELSKTTGNAGARVGCGIIGLQSSV 160
AVVVHADPDDLGRGGHELSKTTGNAGARV CGIIGLQSSV
Sbjct: 121 AVVVHADPDDLGRGGHELSKTTGNAGARVACGIIGLQSSV 160
>Glyma16g27020.1
Length = 167
Score = 266 bits (681), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 134/167 (80%), Positives = 147/167 (88%), Gaps = 7/167 (4%)
Query: 1 MESTKGTVKGVALINGDNSIRGSIQFVQHPSGITHVTGRITGLTPGLHGFHIHALGDTTN 60
ME+ KGTVKGVA+I GDN+IRGS+QF+QHP+G THVTGR+TGL+ G HGFHIHA GDTTN
Sbjct: 1 MEAAKGTVKGVAIIIGDNNIRGSLQFLQHPNGTTHVTGRVTGLSQGFHGFHIHAFGDTTN 60
Query: 61 GCNST-------GPHFNPLKKNHGAPSDEERHAGDLGNIAVGHDGVAEISISDVHIPLSG 113
GCNST GPHFNP KK+HGAPSD++RHAGDLGNIA G DGVAEISI D IPL+G
Sbjct: 61 GCNSTVLTSSTPGPHFNPFKKDHGAPSDDKRHAGDLGNIAAGPDGVAEISIRDRQIPLTG 120
Query: 114 VHSILGRAVVVHADPDDLGRGGHELSKTTGNAGARVGCGIIGLQSSV 160
VHSI+GRAVVVHADPDDLGRGGHELSKTTGNAGARV CGIIGLQSSV
Sbjct: 121 VHSIIGRAVVVHADPDDLGRGGHELSKTTGNAGARVACGIIGLQSSV 167
>Glyma03g40280.3
Length = 152
Score = 206 bits (525), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 103/150 (68%), Positives = 117/150 (78%)
Query: 8 VKGVALINGDNSIRGSIQFVQHPSGITHVTGRITGLTPGLHGFHIHALGDTTNGCNSTGP 67
VK VA++ + G+I FVQ SG T VTG + GL PGLHGFH+HALGDTTNGC STG
Sbjct: 2 VKAVAVLGSSEGVTGTIHFVQEGSGPTTVTGSLAGLKPGLHGFHVHALGDTTNGCLSTGS 61
Query: 68 HFNPLKKNHGAPSDEERHAGDLGNIAVGHDGVAEISISDVHIPLSGVHSILGRAVVVHAD 127
HFNP K HGAP DE RHAGDLGN+ VG DG +I+D IPL+G ++I+GRAVVVHAD
Sbjct: 62 HFNPNNKEHGAPEDENRHAGDLGNVNVGDDGTVSFTITDSQIPLTGPNNIIGRAVVVHAD 121
Query: 128 PDDLGRGGHELSKTTGNAGARVGCGIIGLQ 157
PDDLG+GGHELSKTTGNAG RV CGIIGLQ
Sbjct: 122 PDDLGKGGHELSKTTGNAGGRVACGIIGLQ 151
>Glyma03g40280.1
Length = 152
Score = 206 bits (525), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 103/150 (68%), Positives = 117/150 (78%)
Query: 8 VKGVALINGDNSIRGSIQFVQHPSGITHVTGRITGLTPGLHGFHIHALGDTTNGCNSTGP 67
VK VA++ + G+I FVQ SG T VTG + GL PGLHGFH+HALGDTTNGC STG
Sbjct: 2 VKAVAVLGSSEGVTGTIHFVQEGSGPTTVTGSLAGLKPGLHGFHVHALGDTTNGCLSTGS 61
Query: 68 HFNPLKKNHGAPSDEERHAGDLGNIAVGHDGVAEISISDVHIPLSGVHSILGRAVVVHAD 127
HFNP K HGAP DE RHAGDLGN+ VG DG +I+D IPL+G ++I+GRAVVVHAD
Sbjct: 62 HFNPNNKEHGAPEDENRHAGDLGNVNVGDDGTVSFTITDSQIPLTGPNNIIGRAVVVHAD 121
Query: 128 PDDLGRGGHELSKTTGNAGARVGCGIIGLQ 157
PDDLG+GGHELSKTTGNAG RV CGIIGLQ
Sbjct: 122 PDDLGKGGHELSKTTGNAGGRVACGIIGLQ 151
>Glyma19g42890.2
Length = 152
Score = 201 bits (511), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 101/150 (67%), Positives = 114/150 (76%)
Query: 8 VKGVALINGDNSIRGSIQFVQHPSGITHVTGRITGLTPGLHGFHIHALGDTTNGCNSTGP 67
VK VA++ + G+I F Q +G T VTG + GL PGLHGFH+HALGDTTNGC STG
Sbjct: 2 VKAVAVLGSSEGVTGTIFFTQEGNGPTTVTGSLAGLKPGLHGFHVHALGDTTNGCLSTGA 61
Query: 68 HFNPLKKNHGAPSDEERHAGDLGNIAVGHDGVAEISISDVHIPLSGVHSILGRAVVVHAD 127
HFNP HGAP DE RHAGDLGN+ VG DG SI+D IPL+G +SI+GRAVVVHAD
Sbjct: 62 HFNPNNNEHGAPEDENRHAGDLGNVNVGDDGTVSFSITDSQIPLTGPNSIIGRAVVVHAD 121
Query: 128 PDDLGRGGHELSKTTGNAGARVGCGIIGLQ 157
DDLG+GGHELSKTTGNAG RV CGIIGLQ
Sbjct: 122 SDDLGKGGHELSKTTGNAGGRVACGIIGLQ 151
>Glyma19g42890.1
Length = 152
Score = 201 bits (511), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 101/150 (67%), Positives = 114/150 (76%)
Query: 8 VKGVALINGDNSIRGSIQFVQHPSGITHVTGRITGLTPGLHGFHIHALGDTTNGCNSTGP 67
VK VA++ + G+I F Q +G T VTG + GL PGLHGFH+HALGDTTNGC STG
Sbjct: 2 VKAVAVLGSSEGVTGTIFFTQEGNGPTTVTGSLAGLKPGLHGFHVHALGDTTNGCLSTGA 61
Query: 68 HFNPLKKNHGAPSDEERHAGDLGNIAVGHDGVAEISISDVHIPLSGVHSILGRAVVVHAD 127
HFNP HGAP DE RHAGDLGN+ VG DG SI+D IPL+G +SI+GRAVVVHAD
Sbjct: 62 HFNPNNNEHGAPEDENRHAGDLGNVNVGDDGTVSFSITDSQIPLTGPNSIIGRAVVVHAD 121
Query: 128 PDDLGRGGHELSKTTGNAGARVGCGIIGLQ 157
DDLG+GGHELSKTTGNAG RV CGIIGLQ
Sbjct: 122 SDDLGKGGHELSKTTGNAGGRVACGIIGLQ 151
>Glyma11g19840.2
Length = 204
Score = 187 bits (474), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 93/151 (61%), Positives = 111/151 (73%)
Query: 6 GTVKGVALINGDNSIRGSIQFVQHPSGITHVTGRITGLTPGLHGFHIHALGDTTNGCNST 65
T K VA++ G +++ G +Q G T V+ RITGLTPGLHGFH+H GDTTNGC ST
Sbjct: 51 ATKKAVAVLKGTSAVEGVATLIQEDDGPTTVSVRITGLTPGLHGFHLHEYGDTTNGCIST 110
Query: 66 GPHFNPLKKNHGAPSDEERHAGDLGNIAVGHDGVAEISISDVHIPLSGVHSILGRAVVVH 125
G HFNP K HGAP DE RHAGDLGNI +GVAE +I D IPLSG +S++GRA+VVH
Sbjct: 111 GAHFNPNKLTHGAPEDEVRHAGDLGNIVANAEGVAEATIVDNQIPLSGPNSVVGRALVVH 170
Query: 126 ADPDDLGRGGHELSKTTGNAGARVGCGIIGL 156
DDLG+GGHELS TTGNAG R+ CG++GL
Sbjct: 171 ELEDDLGKGGHELSLTTGNAGGRLACGVVGL 201
>Glyma12g08650.1
Length = 204
Score = 181 bits (460), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/151 (60%), Positives = 109/151 (72%)
Query: 6 GTVKGVALINGDNSIRGSIQFVQHPSGITHVTGRITGLTPGLHGFHIHALGDTTNGCNST 65
T K VA++ G +++ G +Q G T V+ ITGLTPGLHGFH+H GDTTNGC ST
Sbjct: 51 ATKKAVAVLKGTSAVEGVATLIQEDDGPTTVSVSITGLTPGLHGFHLHEYGDTTNGCIST 110
Query: 66 GPHFNPLKKNHGAPSDEERHAGDLGNIAVGHDGVAEISISDVHIPLSGVHSILGRAVVVH 125
G HFNP HGAP DE RHAGDLGNI +GVAE +I D IPLSG +S++GRA+VVH
Sbjct: 111 GAHFNPNNLTHGAPEDEVRHAGDLGNIVANAEGVAEATIVDNQIPLSGPNSVVGRALVVH 170
Query: 126 ADPDDLGRGGHELSKTTGNAGARVGCGIIGL 156
DDLG+GGHELS TTGNAG R+ CG++GL
Sbjct: 171 ELEDDLGKGGHELSLTTGNAGGRLACGVVGL 201
>Glyma11g19840.3
Length = 203
Score = 181 bits (458), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 92/151 (60%), Positives = 110/151 (72%), Gaps = 1/151 (0%)
Query: 6 GTVKGVALINGDNSIRGSIQFVQHPSGITHVTGRITGLTPGLHGFHIHALGDTTNGCNST 65
T K VA++ G +++ G +Q G T V+ RITGLTPGLHGFH+H GDTTNGC ST
Sbjct: 51 ATKKAVAVLKGTSAVEGVATLIQEDDGPTTVSVRITGLTPGLHGFHLHEYGDTTNGCIST 110
Query: 66 GPHFNPLKKNHGAPSDEERHAGDLGNIAVGHDGVAEISISDVHIPLSGVHSILGRAVVVH 125
G HFNP K HGAP DE RHAGDLGNI +GVAE +I D IPLSG +S++GRA+VVH
Sbjct: 111 GAHFNPNKLTHGAPEDEVRHAGDLGNIVANAEGVAEATIVDNQIPLSGPNSVVGRALVVH 170
Query: 126 ADPDDLGRGGHELSKTTGNAGARVGCGIIGL 156
DDLG+GGHELS TTGNAG R+ C ++GL
Sbjct: 171 ELEDDLGKGGHELSLTTGNAGGRLAC-VVGL 200
>Glyma11g19840.1
Length = 209
Score = 179 bits (455), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 90/146 (61%), Positives = 106/146 (72%)
Query: 6 GTVKGVALINGDNSIRGSIQFVQHPSGITHVTGRITGLTPGLHGFHIHALGDTTNGCNST 65
T K VA++ G +++ G +Q G T V+ RITGLTPGLHGFH+H GDTTNGC ST
Sbjct: 51 ATKKAVAVLKGTSAVEGVATLIQEDDGPTTVSVRITGLTPGLHGFHLHEYGDTTNGCIST 110
Query: 66 GPHFNPLKKNHGAPSDEERHAGDLGNIAVGHDGVAEISISDVHIPLSGVHSILGRAVVVH 125
G HFNP K HGAP DE RHAGDLGNI +GVAE +I D IPLSG +S++GRA+VVH
Sbjct: 111 GAHFNPNKLTHGAPEDEVRHAGDLGNIVANAEGVAEATIVDNQIPLSGPNSVVGRALVVH 170
Query: 126 ADPDDLGRGGHELSKTTGNAGARVGC 151
DDLG+GGHELS TTGNAG R+ C
Sbjct: 171 ELEDDLGKGGHELSLTTGNAGGRLAC 196
>Glyma12g30260.1
Length = 183
Score = 173 bits (438), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 88/151 (58%), Positives = 109/151 (72%), Gaps = 1/151 (0%)
Query: 7 TVKGVALINGDNSIRGSIQFVQHP-SGITHVTGRITGLTPGLHGFHIHALGDTTNGCNST 65
T K VA++ G++S+ G + Q +G T VT R++GLTPG HGFH+H GD TNGC ST
Sbjct: 30 TKKAVAILKGNSSVHGLVTLTQQQDNGPTTVTVRVSGLTPGPHGFHLHEFGDITNGCIST 89
Query: 66 GPHFNPLKKNHGAPSDEERHAGDLGNIAVGHDGVAEISISDVHIPLSGVHSILGRAVVVH 125
GPHFNP K HGAP D+ RHAGDLGNI DGVAE + D IPL G +S++GRA+VVH
Sbjct: 90 GPHFNPNKLKHGAPEDKIRHAGDLGNIVANADGVAEATTVDNQIPLIGPNSVVGRALVVH 149
Query: 126 ADPDDLGRGGHELSKTTGNAGARVGCGIIGL 156
DDLG+GG ELS +TGNAG R+ CG++GL
Sbjct: 150 ELEDDLGKGGQELSLSTGNAGGRLACGVVGL 180
>Glyma19g42890.3
Length = 116
Score = 137 bits (345), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 78/150 (52%), Positives = 86/150 (57%), Gaps = 36/150 (24%)
Query: 8 VKGVALINGDNSIRGSIQFVQHPSGITHVTGRITGLTPGLHGFHIHALGDTTNGCNSTGP 67
VK VA++ + G+I F Q +G T VTG + GL PGLHGFH+HALGDTTNGC STG
Sbjct: 2 VKAVAVLGSSEGVTGTIFFTQEGNGPTTVTGSLAGLKPGLHGFHVHALGDTTNGCLSTGA 61
Query: 68 HFNPLKKNHGAPSDEERHAGDLGNIAVGHDGVAEISISDVHIPLSGVHSILGRAVVVHAD 127
HFNP HGAP DE RHAGDLGN+ VG D
Sbjct: 62 HFNPNNNEHGAPEDENRHAGDLGNVNVGDD------------------------------ 91
Query: 128 PDDLGRGGHELSKTTGNAGARVGCGIIGLQ 157
GGHELSKTTGNAG RV CGIIGLQ
Sbjct: 92 ------GGHELSKTTGNAGGRVACGIIGLQ 115
>Glyma03g40280.2
Length = 109
Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 66/90 (73%)
Query: 8 VKGVALINGDNSIRGSIQFVQHPSGITHVTGRITGLTPGLHGFHIHALGDTTNGCNSTGP 67
VK VA++ + G+I FVQ SG T VTG + GL PGLHGFH+HALGDTTNGC STG
Sbjct: 2 VKAVAVLGSSEGVTGTIHFVQEGSGPTTVTGSLAGLKPGLHGFHVHALGDTTNGCLSTGS 61
Query: 68 HFNPLKKNHGAPSDEERHAGDLGNIAVGHD 97
HFNP K HGAP DE RHAGDLGN+ VG D
Sbjct: 62 HFNPNNKEHGAPEDENRHAGDLGNVNVGDD 91
>Glyma05g04170.1
Length = 304
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 55/111 (49%), Gaps = 10/111 (9%)
Query: 20 IRGSIQFVQHPSGITHVTGRITGLTPGLHGFHIHALGDTTNGCNSTGPHFNPL-KKNHGA 78
I G ++ Q + + +GL+PG HG+ I+ GD T G STG FNP+ ++N
Sbjct: 158 IFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTRGAASTGKMFNPVNEENSKE 217
Query: 79 PSDEERHAGDLGNIAVGHDGVAEISISDVHIPLSGVHSILGRAVVVHADPD 129
P GDLG + G E S V L V ++GR+VVV+A D
Sbjct: 218 P------LGDLGTLEANEKG--EAFYSGVKEKLR-VADLIGRSVVVYATED 259