Miyakogusa Predicted Gene

Lj0g3v0069769.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0069769.1 tr|A9RVH9|A9RVH9_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,45.45,0.0000000000003,DAP3,Ribosomal protein S23/S29,
mitochondrial; seg,NULL; SUBFAMILY NOT NAMED,NULL; MITOCHONDRIAL
28S,CUFF.3365.1
         (192 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g06320.1                                                       258   4e-69
Glyma11g29760.1                                                       248   3e-66

>Glyma18g06320.1 
          Length = 437

 Score =  258 bits (658), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 128/199 (64%), Positives = 145/199 (72%), Gaps = 7/199 (3%)

Query: 1   MLRSVVRAATTHHSWRHKPTTIXXXXXXX-------XXXXXXXXXXXXXXDLLFDEQERL 53
           MLRS+ RAA T+H W H   T                               LFD+QER 
Sbjct: 1   MLRSLARAAATNHRWHHNHATFSSLGHSSRPPKPTPPFKPDPKKPTAAAAVALFDDQERR 60

Query: 54  RRLAADEKDPSLDVGPDGRPLFTSATSISKLTGKDSCTYFKLTKEALNEVLPEGVPMGMV 113
           R+L AD+K+PSLDVGP GRPLF++  S+S L+  D CTYFKLTK+ALN+VLPEG+PMGMV
Sbjct: 61  RQLDADDKNPSLDVGPKGRPLFSAVPSLSHLSRNDVCTYFKLTKDALNKVLPEGLPMGMV 120

Query: 114 KEFQDSMRPALLVRQSFLDLRDNFRRIVDPPLWSPPGKGVKARKQVVLDGPVSCGKSIAL 173
            EFQDS+R ALLVRQSFLDLRDNFRR+VDPP+WS  GKGVK RKQVVLDGPVSCGKSI L
Sbjct: 121 DEFQDSLRTALLVRQSFLDLRDNFRRVVDPPMWSSNGKGVKVRKQVVLDGPVSCGKSIVL 180

Query: 174 AMLVQWAREEGWLVFYVPQ 192
           AMLVQWAREEGWLV YVP+
Sbjct: 181 AMLVQWAREEGWLVLYVPK 199


>Glyma11g29760.1 
          Length = 436

 Score =  248 bits (633), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 125/198 (63%), Positives = 145/198 (73%), Gaps = 6/198 (3%)

Query: 1   MLRSVVRAATTHHSWRHKPTTIXXXXXXXXXXXXXXXXXXXXX------DLLFDEQERLR 54
           MLRS+ RA  T+H      +++                             L DEQER R
Sbjct: 1   MLRSLARAVATNHRCHATFSSLSHSSRPPKPTPPFKPDPKKSAPNAAAAAALIDEQERRR 60

Query: 55  RLAADEKDPSLDVGPDGRPLFTSATSISKLTGKDSCTYFKLTKEALNEVLPEGVPMGMVK 114
           +L AD+K+PSLDVGP+GRPLF++A S S L+  D CTYFKLTK+ALN+VLPEG+P+GMV 
Sbjct: 61  QLDADDKNPSLDVGPNGRPLFSAAPSFSHLSRNDVCTYFKLTKDALNKVLPEGLPVGMVN 120

Query: 115 EFQDSMRPALLVRQSFLDLRDNFRRIVDPPLWSPPGKGVKARKQVVLDGPVSCGKSIALA 174
           EFQDS+R ALLVRQSFLDLRDNFRR+VDPP+WS  GKGVK RKQVVLDGPVSCGKSIALA
Sbjct: 121 EFQDSLRTALLVRQSFLDLRDNFRRVVDPPMWSSNGKGVKVRKQVVLDGPVSCGKSIALA 180

Query: 175 MLVQWAREEGWLVFYVPQ 192
           MLVQWAREEGWLV YVP+
Sbjct: 181 MLVQWAREEGWLVLYVPK 198