Miyakogusa Predicted Gene

Lj0g3v0068929.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0068929.1 Non Chatacterized Hit- tr|K3XPS2|K3XPS2_SETIT
Uncharacterized protein (Fragment) OS=Setaria italica
,33.16,7e-19,seg,NULL,CUFF.3294.1
         (289 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g07510.1                                                       160   2e-39
Glyma19g06020.1                                                        64   2e-10
Glyma13g07500.1                                                        63   3e-10

>Glyma13g07510.1 
          Length = 243

 Score =  160 bits (404), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 82/138 (59%), Positives = 97/138 (70%)

Query: 149 MSVKAISIQALTQRMFXXXXXXXXXXXXXXXNFGIGVDITGHVWQLPHVMKVQSLTVLPD 208
           MS+KAISIQA++QRMF               N GIGVDITG+V QLPH+MKV+SL VLPD
Sbjct: 1   MSIKAISIQAVSQRMFLILDSHGDLHLLSLSNSGIGVDITGNVLQLPHIMKVRSLAVLPD 60

Query: 209 VSTVPQTAWISDGCHSVHMFSTXXXXXXXXXXXXXXXXQKLMHLPVIRVLFSTEKIQDII 268
           +ST+ QT WISDGCHSVHMF+                 +KLMHLPVIRVLFS+EKIQDII
Sbjct: 61  LSTMSQTIWISDGCHSVHMFTAMDIENALNEADGNDCNEKLMHLPVIRVLFSSEKIQDII 120

Query: 269 SIAANSVLILGQGSLYAY 286
           S++ANS+LILGQ   Y +
Sbjct: 121 SLSANSILILGQDCKYHW 138


>Glyma19g06020.1 
          Length = 463

 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/104 (39%), Positives = 48/104 (46%), Gaps = 26/104 (25%)

Query: 11  IKLMRCAVIRCSRPVWXXXXXXXXXXXXEENGVRIFALRRLV---AAKRVGXXXXXXXXX 67
           ++LMRCAVI CSRPV+            EENGVR+F LRRLV   + KRVG         
Sbjct: 375 VRLMRCAVIECSRPVFSVSVAFGFLILGEENGVRVFGLRRLVKGRSGKRVGNSKPLKNGG 434

Query: 68  XXXXXPNXXXXXXXXXXXXXXXXEGVLEA-TCNGDTEAKVEKHG 110
                                   G LEA  CNGD E K+E+HG
Sbjct: 435 RG----------------------GGLEAVNCNGDLEGKMERHG 456


>Glyma13g07500.1 
          Length = 276

 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 51/111 (45%), Gaps = 24/111 (21%)

Query: 6   DHEDGIKLMRCAVIRCSRPVWXXXXXXXXXXXXEENGVRIFALRRLV---AAKRVGXXXX 62
           D + G++LMRCAVI C+RPV+            EENGVR+F LRRLV   + KRVG    
Sbjct: 179 DDDGGLRLMRCAVIECTRPVFSVNVAFGFLILGEENGVRVFGLRRLVKGRSGKRVGNSKQ 238

Query: 63  XXXXXXXXXXPNXXXXXXXXXXXXXXXXEGVLEA-TCNGDTEAKVEKHGVA 112
                                          LEA  CNGD + K+E++ VA
Sbjct: 239 LRNGGGGRGA--------------------GLEAVNCNGDLKGKMERYVVA 269