Miyakogusa Predicted Gene

Lj0g3v0068469.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0068469.1 tr|G7IRI9|G7IRI9_MEDTR Condensin complex subunit
2 OS=Medicago truncatula GN=MTR_2g087880 PE=3
SV=1,69.14,0,Cnd2,Condensin complex subunit 2/barren; GB DEF:
HYPOTHETICAL PROTEIN AT2G32590,NULL; FAMILY NOT NAM,CUFF.3266.1
         (615 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g10280.1                                                       788   0.0  
Glyma06g46480.1                                                       775   0.0  
Glyma12g31760.1                                                       662   0.0  
Glyma13g38670.1                                                       142   1e-33

>Glyma12g10280.1 
          Length = 666

 Score =  788 bits (2034), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/598 (67%), Positives = 467/598 (78%), Gaps = 14/598 (2%)

Query: 17  TVSPNPTTAAPSKRLPVAARILSPTSPVFIGSNDDQVEXXXXXXXXXXXXXXKSLAAAAN 76
           T+SPNPT     +RL    RILSPTSP  +GSNDD++E              KSLA   N
Sbjct: 4   TLSPNPTMDQ-KQRL----RILSPTSPFILGSNDDKLERAQARDARATAIRRKSLAL--N 56

Query: 77  FPSRDPDSDPCLTKDQILDLFHNCIKLAAENKINQKNTWELKLIDHLTDFIRTEEESDVE 136
            P + P+SDPCL K QI+DLF NCIKLA+ENKINQKNTWEL LIDHLTD I+ EEE+D E
Sbjct: 57  QPLQ-PNSDPCLNKQQIIDLFQNCIKLASENKINQKNTWELNLIDHLTDIIKAEEENDAE 115

Query: 137 TNFQIASCTLEAGVKIYSLRVDSVHSEAYKVLARMNRVGQEAEEDSTLDSVNAEDGHEES 196
           TNFQ ASCTLEAGVKIYSLRVDSVHSEAYKVL  MNR GQEAEED+TL+ VN E G  ES
Sbjct: 116 TNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGMNRAGQEAEEDTTLNGVNIESGQVES 175

Query: 197 KKGIDKKLSPLSTLESSFEALNVKKFDVAFAVDPLYRHTSAQFDEGGAKGLLMNNLGVYG 256
           +K   KKLSPLSTLESSFEALNVKKFD AF VDPLYR T+A+FDEGGAKGLLMNNLGVYG
Sbjct: 176 RKETSKKLSPLSTLESSFEALNVKKFDAAFVVDPLYRQTTAKFDEGGAKGLLMNNLGVYG 235

Query: 257 GCRVLFDSLEVPGKCIASQSEQDISDTIDLSFLRDCIEEMLLNMRMKDEISPTLRVIVNQ 316
            CRVLFDS EVP KC+ASQ++ DISDTIDLSF +DCI++M+L+MR+KDEISP+LR IVNQ
Sbjct: 236 DCRVLFDSQEVPAKCMASQNQSDISDTIDLSFAKDCIDQMVLDMRVKDEISPSLRTIVNQ 295

Query: 317 FDENNRRPSDFEFSGQKSAEEFGVDIDCSIAAERGEYENFPSWCNDHDNQTFVAEQGSND 376
           FDE+NRRP+D +  GQ SAE+     +      R EYEN  +W +D D+QT VA+ G ND
Sbjct: 296 FDESNRRPADIQLQGQNSAEDLDNADNNENGFYREEYENCMAWSDDRDDQTVVADPGYND 355

Query: 377 AEPSFSSYPQEK-EPFPSQDSDMDGNFENVDEYIFLSLGLRSKKNAWAGPDHWKYGKAKE 435
           A+PSF SYPQ+  EPFPS + DMDG FENVD Y+FLSLG  SK+NAWAGPDHWKY K+KE
Sbjct: 356 ADPSFPSYPQDNDEPFPSPEIDMDGRFENVDGYLFLSLGFSSKQNAWAGPDHWKYRKSKE 415

Query: 436 SVARCTSEDDSTLETRQPRAKRQDEDDLEFTSCLETKFPDIFCPPKNSKSLLLPENRPPC 495
                TSED STL++RQP++KRQ E DL FT+ LE K  D F PPKN K LLLPE+R PC
Sbjct: 416 --VHPTSEDGSTLKSRQPKSKRQTEVDLNFTNSLEKKMLDTFSPPKNPKLLLLPESRLPC 473

Query: 496 VTKLPEDCHYEPQDLVKLFLLPNVKCLGRRARKLSDVSEEQGNDYESFPSWDNGGV---G 552
            TKLPEDCHY+P+DLVKLFLL NVKCLGR+A + SD S EQ ++YESFPSWDNG V    
Sbjct: 474 NTKLPEDCHYQPEDLVKLFLLSNVKCLGRKANRFSDGSREQSDEYESFPSWDNGSVCGDD 533

Query: 553 DGEYDGDTHSDIDDPSTLISQPRRVNKIEVDYDKTSKQVDVQALKIALWDHIQESIQL 610
            G+Y GD H D++D  TL++QPR+V+KIEV YDKTSKQVDV ALKI LWDH+QES++L
Sbjct: 534 AGDYGGDLHGDMEDTDTLVTQPRQVSKIEVQYDKTSKQVDVHALKITLWDHVQESVKL 591


>Glyma06g46480.1 
          Length = 670

 Score =  775 bits (2001), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/602 (67%), Positives = 464/602 (77%), Gaps = 18/602 (2%)

Query: 17  TVSPNPTTAAPSKRLPVAARILSPTSPVFIGSNDDQVEXXXXXXXXXXXXXXKSLAAAAN 76
           T+SPNP      +RL    RI SPTSP  +GSN+DQ+E              KSLA   N
Sbjct: 4   TLSPNPAMGR-KQRL----RIQSPTSPFVLGSNNDQLERARARDARAAANRRKSLAL--N 56

Query: 77  FPSRDPDSDPCLTKDQILDLFHNCIKLAAENKINQKNTWELKLIDHLTDFIRTEEESDVE 136
            P +  +S P L K QILDLF NCIKLA+ENKINQKNTWEL LIDHLTD I+ EEE D E
Sbjct: 57  QPLQ-ANSHPGLNKQQILDLFQNCIKLASENKINQKNTWELNLIDHLTDIIKAEEEHDAE 115

Query: 137 TNFQIASCTLEAGVKIYSLRVDSVHSEAYKVLARMNRVGQEAEE----DSTLDSVNAEDG 192
           TNFQ ASCTLEAGVKIYSLRVDSVHSEAYKVL  MNR GQEAEE    D+TLD VN E  
Sbjct: 116 TNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGMNRAGQEAEEAMMPDTTLDGVNIESR 175

Query: 193 HEESKKGIDKKLSPLSTLESSFEALNVKKFDVAFAVDPLYRHTSAQFDEGGAKGLLMNNL 252
            EES+K   KKLSPLSTLESSFEALNVKKFD AF VDPLYR T+A+FDEGGAKGLLMNNL
Sbjct: 176 QEESRKETSKKLSPLSTLESSFEALNVKKFDAAFVVDPLYRQTTAKFDEGGAKGLLMNNL 235

Query: 253 GVYGGCRVLFDSLEVPGKCIASQSEQDISDTIDLSFLRDCIEEMLLNMRMKDEISPTLRV 312
           GVYGGCRVLFDS EVP KC+ASQ++ DISDTIDLSFL+DCI++M+L+MR+KDEISP+LR 
Sbjct: 236 GVYGGCRVLFDSQEVPAKCMASQNQSDISDTIDLSFLKDCIDQMVLDMRVKDEISPSLRT 295

Query: 313 IVNQFDENNRRPSDFEFSGQKSAEEFGVDIDCSIAAERGEYENFPSWCNDHDNQTFVAEQ 372
           IVNQFDE+NRRP+D +  G  SAE+     +     +R EYEN  +W +DHD+QT VA+ 
Sbjct: 296 IVNQFDESNRRPTDIQLQGPSSAEDLDNADNNENGFDREEYENCTAWSDDHDDQTVVADL 355

Query: 373 GSNDAEPSFSSYPQEK-EPFPSQDSDMDGNFENVDEYIFLSLGLRSKKNAWAGPDHWKYG 431
             NDA+PSFSSYPQ+  E FPS ++DMD  FENV+ Y+FLSLG  SK+NAWAGPDHWKY 
Sbjct: 356 DYNDADPSFSSYPQDNAEQFPSPETDMDDRFENVEGYLFLSLGFSSKQNAWAGPDHWKYR 415

Query: 432 KAKESVARCTSEDDSTLETRQPRAKRQDEDDLEFTSCLETKFPDIFCPPKNSKSLLLPEN 491
           K+KE     TSED STL++RQP++KRQ E DL FT  LE K  D F PPKN K LLLPE+
Sbjct: 416 KSKE--VHPTSEDGSTLKSRQPKSKRQTEVDLNFTDSLEKKVLDTFSPPKNPKLLLLPES 473

Query: 492 RPPCVTKLPEDCHYEPQDLVKLFLLPNVKCLGRRARKLSDVSEEQGNDYESFPSWDNGGV 551
           R PC TKLPEDCHY+P+DLVKLFLL NVKCLGR+A + SD S EQ N+YESFPSWDNG V
Sbjct: 474 RLPCNTKLPEDCHYQPEDLVKLFLLSNVKCLGRKANRFSDGSREQSNEYESFPSWDNGSV 533

Query: 552 ---GDGEYDGDTHSDIDDPSTLISQPRRVNKIEVDYDKTSKQVDVQALKIALWDHIQESI 608
                G+Y GD HSD++D +TLI+QPR+VNKIEV YDKTSKQVDV ALKI LWDH+QES+
Sbjct: 534 CGDDAGDYGGDLHSDMEDSNTLITQPRQVNKIEVQYDKTSKQVDVHALKITLWDHVQESV 593

Query: 609 QL 610
           +L
Sbjct: 594 KL 595


>Glyma12g31760.1 
          Length = 540

 Score =  662 bits (1707), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/620 (58%), Positives = 413/620 (66%), Gaps = 106/620 (17%)

Query: 17  TVSPNPTTAAPSKRLPVAARILSPTSPVFIGSNDDQVEXXXXXXXXXXXXXXKSLAAAAN 76
            + PNPTT    K +P++ARI SPTSP F+GSN+DQ+E              K LAA  N
Sbjct: 4   ALGPNPTTDH-KKTVPMSARIQSPTSPFFVGSNNDQLERAQTREARAAAIRRKPLAA--N 60

Query: 77  FPSRDPDSDPCLTKDQILDLFHNCIKLAAENKINQKNTWELKLIDHLTDFIRTEEESDVE 136
           F  +   S PCL K QILDLFHNCIKLA+EN                             
Sbjct: 61  FHPQPSHSHPCLNKHQILDLFHNCIKLASEN----------------------------- 91

Query: 137 TNFQIASCTLEAGVKIYSLRVDSVHSEAYKVLARMNRVGQEAEEDSTLDSVNAEDGHEES 196
                ASCTLEAGVKIYSLRVDSVHSEAYKVLARMNR GQ+ EE                
Sbjct: 92  -----ASCTLEAGVKIYSLRVDSVHSEAYKVLARMNRAGQDTEE---------------- 130

Query: 197 KKGIDKKLSPLSTLESSFEALNVKKFDVAFAVDPLYRHTSAQFDEGGAKGLLMNNLGVYG 256
                                      VAFAVDPLYR  SAQFDEGGAKGLLMNNLG+YG
Sbjct: 131 ---------------------------VAFAVDPLYRQMSAQFDEGGAKGLLMNNLGIYG 163

Query: 257 GCRVLFDSLEVPGKCIASQSEQDISDTIDLSFLRDCIEEMLLNMRMKDEISPTLRVIVNQ 316
            CR+LFDSLEVPGKCI SQ+E DISDTIDLSF RDC+E+M+L++  K EISPTLRVIVNQ
Sbjct: 164 KCRLLFDSLEVPGKCITSQNESDISDTIDLSFARDCVEQMILDIHTKGEISPTLRVIVNQ 223

Query: 317 FDENNRRPSDFEFSGQKSAEEFGVDIDCSIAAERGEYENFPSWCNDHDNQTFVAEQGSND 376
           FDENN+RPSDF+ S +KS EEF   ID  +A E+ EYENFPSW NDHD++ F AE GS+D
Sbjct: 224 FDENNKRPSDFQSSTEKSGEEFDAAIDSELATEK-EYENFPSWSNDHDSEAFPAEWGSDD 282

Query: 377 AEPSFSSYPQEKEPFPSQD-SDMDGNFENVDEYIFLSLGLRSKKNAWAGPDHWKYGKAK- 434
           A+P+F SY QEKEPF SQD  DMD  FENVD Y+FLSLG RSKKNAWAG DHWK+ KAK 
Sbjct: 283 ADPTFPSYHQEKEPFHSQDPPDMDDIFENVDGYLFLSLGFRSKKNAWAGTDHWKFQKAKG 342

Query: 435 -ESVARCTSEDDSTLETRQPRAKRQDEDDLEFTSCLETKFPDIFCPPKNSKSLLLPENRP 493
            ES     SED    +TRQP  KRQ E DL+FTS +E K  DIF PP+N KSL LPEN P
Sbjct: 343 SESEVHRASEDVLVQKTRQPGTKRQVEVDLDFTSFVEKKISDIFSPPRNPKSLQLPENIP 402

Query: 494 PCVTKLPEDCHYEPQDLVKLFLLPNVKCLGRRARKLS----DVSEEQGNDYESFPSWDNG 549
           P +TKLPEDCHYEP+DLV LFLLP VKC+GR+ARKLS    DVS EQ N+YESFPSWDNG
Sbjct: 403 PSITKLPEDCHYEPEDLVNLFLLPYVKCIGRKARKLSGEFADVSGEQCNNYESFPSWDNG 462

Query: 550 GVGDGEYDGDTHSDIDDPSTLISQPR---------------RVNKIEVDYDKTSKQVDVQ 594
            V D +   D HS++DD ++LISQPR               ++NK+EV YDKT KQV+VQ
Sbjct: 463 SVCDDDV-TDVHSEMDDSTSLISQPRQLLQLEHKYDYFQITQINKVEVQYDKTFKQVNVQ 521

Query: 595 ALKIALWDHIQESIQLHVPV 614
           ALKI LWDHIQES+Q  VP+
Sbjct: 522 ALKITLWDHIQESVQ--VPI 539


>Glyma13g38670.1 
          Length = 300

 Score =  142 bits (358), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/178 (48%), Positives = 109/178 (61%), Gaps = 17/178 (9%)

Query: 30  RLPVAARILSPTSPVFIGSNDDQVEXXXXXXXXXXXXXXKSLAAAANFPSRDPDSDPCLT 89
           R+P++ARI SPTSP F+GSNDDQ+E              KSLAA  NF  + P S PCL 
Sbjct: 3   RVPMSARIQSPTSPFFMGSNDDQLERAQARAARASAIRRKSLAA--NFHPQPPHSLPCLN 60

Query: 90  KDQILDLFHNCIKLAAENKINQKNTWELKLIDHLTDFIRTEEESDV-ETNFQ---IASCT 145
           K QI+ L H C+           +   L +     + I T  ++ + + NF+    ASCT
Sbjct: 61  KHQIIFLLHLCVY----------DMMFLYMQFLSMNAIYTNAKTSLWKANFKESFFASCT 110

Query: 146 LEAGVKIYSLRVDSVHSEAYKVLARMNRVGQEAEEDSTLDSVNAEDGHEESKKGIDKK 203
           LEAGV IYSLRVDSVHSEAYKVLARMNR  Q+ E+D+TL +VNAE G + S+K + KK
Sbjct: 111 LEAGVTIYSLRVDSVHSEAYKVLARMNRACQDTEQDTTLGNVNAESG-QASRKEVGKK 167



 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/33 (66%), Positives = 27/33 (81%), Gaps = 2/33 (6%)

Query: 582 VDYDKTSKQVDVQALKIALWDHIQESIQLHVPV 614
           + YDKTSKQV+VQ LK  LWDHIQES+  H+P+
Sbjct: 205 IQYDKTSKQVNVQVLKTTLWDHIQESV--HIPI 235