Miyakogusa Predicted Gene

Lj0g3v0068129.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0068129.1 tr|F2E3C5|F2E3C5_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,48.87,8e-19,FAMILY NOT
NAMED,NULL; coiled-coil,NULL; seg,NULL,CUFF.3244.1
         (308 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g12960.1                                                       108   1e-23
Glyma05g08030.1                                                       101   1e-21
Glyma03g02040.1                                                        55   1e-07
Glyma07g25170.1                                                        49   9e-06

>Glyma17g12960.1 
          Length = 310

 Score =  108 bits (269), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 118/312 (37%), Gaps = 11/312 (3%)

Query: 5   GSRREDAAAPPVSSTNIFAALGSLXXXXXXXXXXDEEGGS---EKKDVFWAPTPLAAKSW 61
           GSRR++A  P ++STN+FAALGSL          D +G S   +KKDVFWAP PL +KSW
Sbjct: 2   GSRRDEA--PAINSTNVFAALGSLKKKKKKPEK-DHQGPSKPKDKKDVFWAPAPLTSKSW 58

Query: 62  AXXXXXXXXXXXXXXXXXXSVWVDPEKSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 121
           A                  SVW  P  +                                
Sbjct: 59  ADVDDEDDDDYYATTAPPESVWAAPTVTQNDAAAAEESESELEGLDDADDDAEDEQENEN 118

Query: 122 XVPV--DTEPVLENPPQPSLATKETERQLSXXXXXXXXXXXXXXXXXXXXFSQTEPSGDK 179
            + V  + EPVL  PP+P + TKE ERQLS                    ++  EP+G +
Sbjct: 119 DLEVTEEAEPVLRKPPEPPVVTKEAERQLSKKELKKKGLEELEAVLAELGYTPKEPTGQE 178

Query: 180 -DSNDLEKKEEDHNSVVVKKEIAXXXXXXXXXXXXXXXXXXXXXXXXXXXDGVDVGS--T 236
            DSN  EKKEED N  V KKE A                            GVD G+   
Sbjct: 179 DDSNGAEKKEEDPNGAVEKKENATGESKNAKKKKKKDKSSKEQKESQDQPHGVDAGTGNA 238

Query: 237 TSLTAGTEKAEDASATDVREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 296
           TS TA TEKAEDASA DV+E                                        
Sbjct: 239 TSETAETEKAEDASAIDVKERLKKVASMKKKKSSKEMDAAARAAANEAAARNARLAASKK 298

Query: 297 XXXGHYNQQPVR 308
               HYNQQPVR
Sbjct: 299 KEKAHYNQQPVR 310


>Glyma05g08030.1 
          Length = 314

 Score =  101 bits (251), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 117/315 (37%), Gaps = 13/315 (4%)

Query: 5   GSRREDAAAPPVSSTNIFAALGSLXXXXXXXXXXDE-----EGGSEKKDVFWAPTPLAAK 59
           GSRR++A  P +++TN+FAALGSL          D+     +    KKDVFWAP PL +K
Sbjct: 2   GSRRDEA--PAINNTNVFAALGSLKKKKKPEKDQDQGPSKSKAQDNKKDVFWAPAPLTSK 59

Query: 60  SWAXXXXXXXXXXXXXXXXXXSVWV-DPEKSNXXXXXXXXXXXXXXXXXXXXXXXXXXXX 118
           SWA                  SVW   P   N                            
Sbjct: 60  SWADVDDEDDDDYYATTAPPESVWAASPVTLNDAAAAAAAEESESELEGLDDADDDGEEE 119

Query: 119 XXXXVPV--DTEPVLENPPQPSLATKETERQLSXXXXXXXXXXXXXXXXXXXXFSQTEPS 176
               + V  + EPVL+ PP+  + TKE ERQLS                    +++ EP+
Sbjct: 120 HENDLEVTEEAEPVLQKPPEQPVVTKEAERQLSKKELKKKGLEELEAVLAELGYTRKEPT 179

Query: 177 GDK-DSNDLEKKEEDHNSVVVKKEIAXXXXXXXXXXXXXXXXXXXXXXXXXXXDGVDVGS 235
           G + DSN  EKKEED    V KKE A                           DG+D G+
Sbjct: 180 GQEDDSNGAEKKEEDPKGAVEKKENATGESKNAKKKKKKEKSSKEQKESQDQLDGLDAGT 239

Query: 236 --TTSLTAGTEKAEDASATDVREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 293
              TS TA TEKAEDASA DV+E                                     
Sbjct: 240 GNATSETAETEKAEDASAIDVKERLKKVASMKKKKSSKEMDAAARAAANEAAARNARLAA 299

Query: 294 XXXXXXGHYNQQPVR 308
                  HYNQQPVR
Sbjct: 300 SKKKEKAHYNQQPVR 314


>Glyma03g02040.1 
          Length = 74

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/61 (52%), Positives = 40/61 (65%), Gaps = 11/61 (18%)

Query: 5  GSRREDAAAPPVSSTNIFAALGSLXXXXXXXXXXDEEGGS---EKKDVFWAPTPLAAKSW 61
          GSRR++   P ++STNIFA LGSL          D++G S   +KKDVFWAP PL +KSW
Sbjct: 1  GSRRDEE--PAINSTNIFAVLGSLKKKK------DQQGPSKPNDKKDVFWAPAPLTSKSW 52

Query: 62 A 62
          A
Sbjct: 53 A 53


>Glyma07g25170.1 
          Length = 72

 Score = 48.5 bits (114), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 9/53 (16%)

Query: 13 APPVSSTNIFAALGSLXXXXXXXXXXDEEGGS---EKKDVFWAPTPLAAKSWA 62
          AP +++TN+F  LGSL          D+ G S   +KKD+FWAP PL +KSWA
Sbjct: 5  APAINNTNVFVVLGSLKKKK------DQRGPSKPNDKKDIFWAPAPLTSKSWA 51