Miyakogusa Predicted Gene

Lj0g3v0067919.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0067919.1 tr|A9SX66|A9SX66_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_110121,63.16,3e-18,Riboflavin synthase
domain-like,Riboflavin synthase-like beta-barrel; no description,NULL;
seg,NULL,CUFF.3230.1
         (159 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g02800.1                                                       142   2e-34
Glyma15g13680.1                                                       136   1e-32
Glyma11g08230.1                                                        50   1e-06
Glyma16g23710.1                                                        49   2e-06
Glyma02g05350.1                                                        49   3e-06

>Glyma09g02800.1 
          Length = 377

 Score =  142 bits (357), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 68/76 (89%), Positives = 71/76 (93%), Gaps = 1/76 (1%)

Query: 5   VQQASVPKVIVSPLELEAASEPPLNLHKPKQPYT-TIVSVERIVGPKAPGETCHIVIDHG 63
           VQQASVPKV VSPLELE A EPPLNLHKPK+PYT TIVSV+R+VGPKAPGETCHIVIDHG
Sbjct: 63  VQQASVPKVNVSPLELEDAKEPPLNLHKPKEPYTATIVSVDRLVGPKAPGETCHIVIDHG 122

Query: 64  GNVPYWEGQSYGFIPP 79
           GNVPYWEGQSYG IPP
Sbjct: 123 GNVPYWEGQSYGVIPP 138


>Glyma15g13680.1 
          Length = 377

 Score =  136 bits (342), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 66/76 (86%), Positives = 70/76 (92%), Gaps = 1/76 (1%)

Query: 5   VQQASVPKVIVSPLELEAASEPPLNLHKPKQPYT-TIVSVERIVGPKAPGETCHIVIDHG 63
           VQQASV KV VSPLELE A EPPLNL+KPK+PYT TIVSV+R+VGPKAPGETCHIVIDHG
Sbjct: 63  VQQASVSKVNVSPLELEDAKEPPLNLYKPKEPYTATIVSVDRLVGPKAPGETCHIVIDHG 122

Query: 64  GNVPYWEGQSYGFIPP 79
           GNVPYWEGQSYG IPP
Sbjct: 123 GNVPYWEGQSYGVIPP 138


>Glyma11g08230.1 
          Length = 362

 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 38/73 (52%), Gaps = 6/73 (8%)

Query: 16  SPLELEAASEPP-----LNLHKPKQPYTTIVSVE-RIVGPKAPGETCHIVIDHGGNVPYW 69
           +P ++E  S+       +N  KPK PY     +  +I G  APGET H+V    G VPY 
Sbjct: 60  APAKVEKESKKQEEGVIVNKFKPKNPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYR 119

Query: 70  EGQSYGFIPPVSD 82
           EGQS G IP   D
Sbjct: 120 EGQSIGVIPDGVD 132


>Glyma16g23710.1 
          Length = 362

 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 6/73 (8%)

Query: 16  SPLELEAASEPP-----LNLHKPKQPYTTIVSVE-RIVGPKAPGETCHIVIDHGGNVPYW 69
           +P ++E  S+       +N  KPK PY     +  +I G  APGET H+V    G +PY 
Sbjct: 60  APAKVEKESKKQDEGVVVNKFKPKTPYVGRCLLNTKITGDDAPGETWHMVFSTEGEIPYR 119

Query: 70  EGQSYGFIPPVSD 82
           EGQS G IP   D
Sbjct: 120 EGQSIGVIPDGVD 132


>Glyma02g05350.1 
          Length = 362

 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 6/73 (8%)

Query: 16  SPLELEAASEPP-----LNLHKPKQPYTTIVSVE-RIVGPKAPGETCHIVIDHGGNVPYW 69
           +P ++E  S+       +N  KPK PY     +  +I G  APGET H+V    G +PY 
Sbjct: 60  APAKVEKESKKQDEGVVVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEIPYR 119

Query: 70  EGQSYGFIPPVSD 82
           EGQS G IP   D
Sbjct: 120 EGQSIGVIPDGID 132