Miyakogusa Predicted Gene

Lj0g3v0066949.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0066949.1 Non Chatacterized Hit- tr|I1H847|I1H847_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,45.95,5e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,Protein of
unknown function DUF647,CUFF.3152.1
         (126 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g07190.1                                                       214   2e-56
Glyma02g13010.1                                                       156   4e-39
Glyma01g07190.2                                                        48   2e-06

>Glyma01g07190.1 
          Length = 436

 Score =  214 bits (544), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 104/126 (82%), Positives = 111/126 (88%)

Query: 1   MQLTSWSSKKAYSLDKKVHLGTRISSFDNMEIKEHLLSAASYYTKAKYLLVERKGMINVI 60
           +Q  SWSSKKA  L KKV LG RISSFDNMEIKEHLL AA YYTKAKYLLVERKG+I+VI
Sbjct: 298 IQFISWSSKKANCLHKKVCLGMRISSFDNMEIKEHLLCAAPYYTKAKYLLVERKGIIDVI 357

Query: 61  VHKDTNAVDVLRSFVHALVLANNVHKIKSLHSEGQMWMENQYEVFIQKLKSLGWKTERLL 120
           VHKD+NA DVL+SF HALVLA NVHK KSLHSEGQ W++ QYEVFIQKLKSLGWKTERLL
Sbjct: 358 VHKDSNAADVLKSFFHALVLAKNVHKSKSLHSEGQKWIDYQYEVFIQKLKSLGWKTERLL 417

Query: 121 SPIIWR 126
           SPIIWR
Sbjct: 418 SPIIWR 423


>Glyma02g13010.1 
          Length = 314

 Score =  156 bits (395), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 81/126 (64%), Positives = 91/126 (72%), Gaps = 21/126 (16%)

Query: 1   MQLTSWSSKKAYSLDKKVHLGTRISSFDNMEIKEHLLSAASYYTKAKYLLVERKGMINVI 60
           +Q  SWSSKKA  L KKV+LG RISSFDNME+K                     G+I+VI
Sbjct: 197 IQFISWSSKKANCLHKKVNLGMRISSFDNMEMK---------------------GIIDVI 235

Query: 61  VHKDTNAVDVLRSFVHALVLANNVHKIKSLHSEGQMWMENQYEVFIQKLKSLGWKTERLL 120
           VHKD+NA DVL+ F HALVLA NVHK KS+HSEGQ W++ QYEVFIQKLKSLGWK ERLL
Sbjct: 236 VHKDSNAADVLKLFFHALVLAKNVHKSKSVHSEGQKWIDYQYEVFIQKLKSLGWKIERLL 295

Query: 121 SPIIWR 126
           SPIIWR
Sbjct: 296 SPIIWR 301


>Glyma01g07190.2 
          Length = 329

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/32 (71%), Positives = 25/32 (78%)

Query: 1   MQLTSWSSKKAYSLDKKVHLGTRISSFDNMEI 32
           +Q  SWSSKKA  L KKV LG RISSFDNME+
Sbjct: 298 IQFISWSSKKANCLHKKVCLGMRISSFDNMEM 329