Miyakogusa Predicted Gene

Lj0g3v0066379.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0066379.1 Non Chatacterized Hit- tr|K4C9C3|K4C9C3_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,35.29,8e-16,LEA_2,Late embryogenesis abundant protein,
LEA-14,CUFF.3110.1
         (120 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g38990.1                                                       171   1e-43
Glyma15g07100.2                                                        53   6e-08

>Glyma13g38990.1 
          Length = 243

 Score =  171 bits (434), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 78/120 (65%), Positives = 101/120 (84%)

Query: 1   MSVTYNGLRSSLFYRSDYITENNLAPFKQDTKSQTTLNATFSAAGAYIGTRAVDSINADR 60
           M+V+YN LRSS+FYR +YI+E+ LAPF+QDT+SQTTLNAT +AAG Y+  + +D++NA+R
Sbjct: 124 MTVSYNALRSSIFYRQNYISESQLAPFRQDTRSQTTLNATLTAAGTYLEPKLIDNLNAER 183

Query: 61  SGGSVPLDVQILASASFRSGKWRFRTRWLKVLCRKLPVSIKSNSTSGDLIGGSRECQVWT 120
           +  SV  DVQ++A+ SFRSG WRFRTR LKVLCRK+PV + S S+SGDL+GG RECQVWT
Sbjct: 184 NASSVLFDVQVVAATSFRSGSWRFRTRVLKVLCRKVPVGVSSKSSSGDLVGGDRECQVWT 243


>Glyma15g07100.2 
          Length = 203

 Score = 53.1 bits (126), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 45/93 (48%)

Query: 1   MSVTYNGLRSSLFYRSDYITENNLAPFKQDTKSQTTLNATFSAAGAYIGTRAVDSINADR 60
           +S+ Y+ +  S+ Y    +  N + PF Q  K+ T L+   +A    +       +  +R
Sbjct: 89  ISIYYDTVEVSVRYEDQTLATNAVQPFFQSHKNVTRLHVALTAQSVALYESVPKDLRLER 148

Query: 61  SGGSVPLDVQILASASFRSGKWRFRTRWLKVLC 93
           S G + LDV + A   F+ G W+ R R L++ C
Sbjct: 149 SSGDIELDVWVRARIRFKVGAWKSRHRVLRIFC 181