Miyakogusa Predicted Gene

Lj0g3v0066299.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0066299.2 tr|A9RHM9|A9RHM9_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,48.39,4e-17,unchar_dom_1: uncharacterized domain
1,Phenylacetic acid degradation-related domain; no
description,,CUFF.3109.2
         (129 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g20870.2                                                       204   2e-53
Glyma15g20870.1                                                       204   3e-53
Glyma18g49560.1                                                       194   2e-50
Glyma09g37120.1                                                       190   3e-49
Glyma09g09480.1                                                       159   9e-40
Glyma15g20870.3                                                       154   3e-38
Glyma02g26520.1                                                       105   1e-23
Glyma09g37100.1                                                        80   7e-16
Glyma09g37110.1                                                        50   6e-07

>Glyma15g20870.2 
          Length = 160

 Score =  204 bits (518), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 92/108 (85%), Positives = 104/108 (96%)

Query: 22  LHAIGFEIEELSPQRVTGRLPITLKCCQPFKVLHGGVSAMIAESLASMGAHMASGYQRVA 81
           LH+IGFEIE+LSPQ+++GRLP+T KCCQPFKVLHGGVSA+IAESLASMGAHMASGY+RVA
Sbjct: 19  LHSIGFEIEDLSPQKISGRLPVTQKCCQPFKVLHGGVSALIAESLASMGAHMASGYKRVA 78

Query: 82  GIQLSINHLKRAELGDLVHAEATPLNVGKTVQVWEVTIWKIDPSNLQN 129
           GIQLSINHLKRAE+GDLV+AEATPLNVGKT+QVWEV +WKID SN QN
Sbjct: 79  GIQLSINHLKRAEIGDLVYAEATPLNVGKTIQVWEVRLWKIDASNSQN 126


>Glyma15g20870.1 
          Length = 183

 Score =  204 bits (518), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 92/108 (85%), Positives = 104/108 (96%)

Query: 22  LHAIGFEIEELSPQRVTGRLPITLKCCQPFKVLHGGVSAMIAESLASMGAHMASGYQRVA 81
           LH+IGFEIE+LSPQ+++GRLP+T KCCQPFKVLHGGVSA+IAESLASMGAHMASGY+RVA
Sbjct: 19  LHSIGFEIEDLSPQKISGRLPVTQKCCQPFKVLHGGVSALIAESLASMGAHMASGYKRVA 78

Query: 82  GIQLSINHLKRAELGDLVHAEATPLNVGKTVQVWEVTIWKIDPSNLQN 129
           GIQLSINHLKRAE+GDLV+AEATPLNVGKT+QVWEV +WKID SN QN
Sbjct: 79  GIQLSINHLKRAEIGDLVYAEATPLNVGKTIQVWEVRLWKIDASNSQN 126


>Glyma18g49560.1 
          Length = 158

 Score =  194 bits (493), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 90/109 (82%), Positives = 100/109 (91%)

Query: 21  PLHAIGFEIEELSPQRVTGRLPITLKCCQPFKVLHGGVSAMIAESLASMGAHMASGYQRV 80
           PL +IGFEI+ELSPQRV+G LP+T KCCQPFKVLHGGVSA++AESLAS+GAHMASGYQRV
Sbjct: 16  PLQSIGFEIQELSPQRVSGHLPVTQKCCQPFKVLHGGVSALVAESLASIGAHMASGYQRV 75

Query: 81  AGIQLSINHLKRAELGDLVHAEATPLNVGKTVQVWEVTIWKIDPSNLQN 129
           AGIQLSINHLK A LGDLV+AEA PLNVGKT+QVWEV IWK+DPSN Q 
Sbjct: 76  AGIQLSINHLKSAVLGDLVYAEAIPLNVGKTIQVWEVRIWKLDPSNKQK 124


>Glyma09g37120.1 
          Length = 158

 Score =  190 bits (483), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 89/109 (81%), Positives = 99/109 (90%)

Query: 21  PLHAIGFEIEELSPQRVTGRLPITLKCCQPFKVLHGGVSAMIAESLASMGAHMASGYQRV 80
           PL +IGFEI++LSPQRV+G L IT KCCQPFKVLHGGVSA++AESLAS+GAHMASGYQRV
Sbjct: 16  PLQSIGFEIQDLSPQRVSGHLTITQKCCQPFKVLHGGVSALVAESLASIGAHMASGYQRV 75

Query: 81  AGIQLSINHLKRAELGDLVHAEATPLNVGKTVQVWEVTIWKIDPSNLQN 129
           AGIQLSINHLK A LGDLV AEATPLNVGKT+QVWEV +WK+DPSN Q 
Sbjct: 76  AGIQLSINHLKSAVLGDLVFAEATPLNVGKTIQVWEVRLWKLDPSNKQK 124


>Glyma09g09480.1 
          Length = 98

 Score =  159 bits (401), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 73/92 (79%), Positives = 84/92 (91%)

Query: 21  PLHAIGFEIEELSPQRVTGRLPITLKCCQPFKVLHGGVSAMIAESLASMGAHMASGYQRV 80
           P H+IGFEIE  SPQ+ +G LPIT KCC+PFKVLHGGVSA+IAESL SMGAHMAS Y+R+
Sbjct: 7   PFHSIGFEIENFSPQKFSGHLPITQKCCRPFKVLHGGVSALIAESLESMGAHMASRYKRM 66

Query: 81  AGIQLSINHLKRAELGDLVHAEATPLNVGKTV 112
           AGIQLSINHLKRA++GDLVHA+ATPLNVGKT+
Sbjct: 67  AGIQLSINHLKRAKIGDLVHAKATPLNVGKTI 98


>Glyma15g20870.3 
          Length = 117

 Score =  154 bits (388), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 72/81 (88%), Positives = 78/81 (96%)

Query: 49  QPFKVLHGGVSAMIAESLASMGAHMASGYQRVAGIQLSINHLKRAELGDLVHAEATPLNV 108
           QPFKVLHGGVSA+IAESLASMGAHMASGY+RVAGIQLSINHLKRAE+GDLV+AEATPLNV
Sbjct: 3   QPFKVLHGGVSALIAESLASMGAHMASGYKRVAGIQLSINHLKRAEIGDLVYAEATPLNV 62

Query: 109 GKTVQVWEVTIWKIDPSNLQN 129
           GKT+QVWEV +WKID SN QN
Sbjct: 63  GKTIQVWEVRLWKIDASNSQN 83


>Glyma02g26520.1 
          Length = 64

 Score =  105 bits (262), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 51/64 (79%), Positives = 58/64 (90%)

Query: 50  PFKVLHGGVSAMIAESLASMGAHMASGYQRVAGIQLSINHLKRAELGDLVHAEATPLNVG 109
           PFKVLHGGVSA+IAESLASMGAHMASGYQRVAGIQLSINHLK   L  L++AEA PLNVG
Sbjct: 1   PFKVLHGGVSALIAESLASMGAHMASGYQRVAGIQLSINHLKSVVLCYLLYAEAIPLNVG 60

Query: 110 KTVQ 113
           ++++
Sbjct: 61  RSIR 64


>Glyma09g37100.1 
          Length = 94

 Score = 79.7 bits (195), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 35/51 (68%), Positives = 43/51 (84%)

Query: 69  MGAHMASGYQRVAGIQLSINHLKRAELGDLVHAEATPLNVGKTVQVWEVTI 119
           MGAH+ASGYQRVAGIQLSINHLK   LGD ++AEA PLNVG+++QV+   +
Sbjct: 1   MGAHIASGYQRVAGIQLSINHLKSVALGDFLYAEAIPLNVGRSIQVFNFFL 51


>Glyma09g37110.1 
          Length = 67

 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 21/34 (61%), Positives = 26/34 (76%)

Query: 21 PLHAIGFEIEELSPQRVTGRLPITLKCCQPFKVL 54
          PLH IGFEI++LSPQRV+G L +T KCC+    L
Sbjct: 16 PLHLIGFEIQDLSPQRVSGHLSVTQKCCRLISTL 49