Miyakogusa Predicted Gene

Lj0g3v0065789.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0065789.1 Non Chatacterized Hit- tr|I1NK96|I1NK96_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=3 SV=1,41.6,1e-18,INNER
MEMBRANE ALBINO3-LIKE PROTEIN 1, 2, CHLOROPLAST,NULL; OXA1,Membrane
insertase OXA1/ALB3/YidC; ,CUFF.3069.1
         (246 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g01540.1                                                       285   3e-77
Glyma11g37590.1                                                       273   9e-74
Glyma12g06920.1                                                        85   6e-17
Glyma12g06920.2                                                        85   6e-17
Glyma11g14960.1                                                        84   1e-16

>Glyma18g01540.1 
          Length = 534

 Score =  285 bits (729), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 159/244 (65%), Positives = 180/244 (73%), Gaps = 9/244 (3%)

Query: 1   MQSSQANDPNMKTSQALTNFLPLMIGYFALSVPSGLSLYWLTNNILSTAQQVFLQKSGGA 60
           MQSSQ NDPNMK+SQALT  LPLMIGYFALSVPSGLSLYWLTNNILSTAQQV+LQK GGA
Sbjct: 292 MQSSQPNDPNMKSSQALTKVLPLMIGYFALSVPSGLSLYWLTNNILSTAQQVWLQKLGGA 351

Query: 61  KNPVSPVQDDIMKDNLTQIPKPLSKLSSTKVEDATQARQGEKSTSEGPQRGEKFR----Q 116
           KNPV  V DDIMK++LTQ+ K +SKL+STK E+   ARQ EK TSEGPQ GE+F+    Q
Sbjct: 352 KNPVRQVPDDIMKNDLTQVQKSISKLNSTKAEE---ARQSEK-TSEGPQPGERFKLIKEQ 407

Query: 117 IMXXXXXXXXXXXXXXXXXXXXXXXXTHDKTIEGGNQTEGDLVVEKSQSVAADTDLPISG 176
                                     T +KT+E GNQT GDLVVEKS+ VA+DTD  ISG
Sbjct: 408 EARRRQRKEEERKALEAAARKAKIDETFEKTVEEGNQTGGDLVVEKSRFVASDTDPSISG 467

Query: 177 IVNGNQSSKDLEGNQNSTSTSETENDQVSAH-SKVGINDKSLDQEPREVLTTTATTKKQP 235
           +VNGN  SKDLEGNQNSTS SETEN+  SAH + V IN+K+LD+EPREVLTTT  T KQP
Sbjct: 468 VVNGNPLSKDLEGNQNSTSISETENNDGSAHFNNVEINEKNLDKEPREVLTTTTATNKQP 527

Query: 236 PRED 239
           P E+
Sbjct: 528 PAEE 531


>Glyma11g37590.1 
          Length = 543

 Score =  273 bits (699), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 159/247 (64%), Positives = 182/247 (73%), Gaps = 12/247 (4%)

Query: 1   MQSSQANDPNMKTSQALTNFLPLMIGYFALSVPSGLSLYWLTNNILSTAQQVFLQKSGGA 60
           MQSSQ NDPNMK+SQALTNFLPLMIGYFALSVPSGLSLYWLTNNILSTAQQV+LQK GGA
Sbjct: 298 MQSSQPNDPNMKSSQALTNFLPLMIGYFALSVPSGLSLYWLTNNILSTAQQVWLQKLGGA 357

Query: 61  KNPVSPVQDDIMKDNLTQIPKPLSKLSSTKVEDATQARQGEKSTSEGPQRGEKFRQI--- 117
           KNPV  V DDIMK++LTQ+ K +SKL+ST  E+A   R  EK TSEGPQ GE+F+ I   
Sbjct: 358 KNPVRQVPDDIMKNDLTQVQKSMSKLNSTTAEEA---RLSEK-TSEGPQPGERFKLIKEQ 413

Query: 118 ----MXXXXXXXXXXXXXXXXXXXXXXXXTHDKTIEGGNQTEGDLVVEKSQSVAADTDLP 173
                                        T ++T+E  NQT GDLVVEKS+S+A+DTD  
Sbjct: 414 EARRKQQREEEEEKRKALEAAARETKVDKTLEETVEVENQTGGDLVVEKSRSLASDTDPS 473

Query: 174 ISGIVNGNQSSKDLEGNQNSTSTSETENDQVSAH-SKVGINDKSLDQEPREVLTTTATTK 232
           ISG+VNGN  SKDLEGNQNSTSTSETEN++ SAH + V IN+K LD+EPREVLTTT TT 
Sbjct: 474 ISGVVNGNPLSKDLEGNQNSTSTSETENNEGSAHFNNVEINEKILDKEPREVLTTTTTTN 533

Query: 233 KQPPRED 239
           KQPP E+
Sbjct: 534 KQPPAEE 540


>Glyma12g06920.1 
          Length = 450

 Score = 85.1 bits (209), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 46/110 (41%), Positives = 65/110 (59%), Gaps = 23/110 (20%)

Query: 8   DPNMKTSQALTNFLPLMIGYFALSVPSGLSLYWLTNNILSTAQQVFLQKSGGAKNPVSPV 67
           DP+ K    +  FLPLMIGYF+LSVPSGL++YW  NN+LSTAQQV+L+K GGAK    PV
Sbjct: 291 DPSQKNQLLILKFLPLMIGYFSLSVPSGLTIYWFINNVLSTAQQVWLRKLGGAK----PV 346

Query: 68  QDDIMKDNLTQIPKPLSKLSSTKVEDATQARQGEKSTSEGPQRGEKFRQI 117
            ++     +T                   A + ++S S+  + GE+F+Q+
Sbjct: 347 VNENAGGIIT-------------------AGRAKRSDSQLARNGERFKQL 377


>Glyma12g06920.2 
          Length = 448

 Score = 85.1 bits (209), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 46/110 (41%), Positives = 65/110 (59%), Gaps = 23/110 (20%)

Query: 8   DPNMKTSQALTNFLPLMIGYFALSVPSGLSLYWLTNNILSTAQQVFLQKSGGAKNPVSPV 67
           DP+ K    +  FLPLMIGYF+LSVPSGL++YW  NN+LSTAQQV+L+K GGAK    PV
Sbjct: 291 DPSQKNQLLILKFLPLMIGYFSLSVPSGLTIYWFINNVLSTAQQVWLRKLGGAK----PV 346

Query: 68  QDDIMKDNLTQIPKPLSKLSSTKVEDATQARQGEKSTSEGPQRGEKFRQI 117
            ++     +T                   A + ++S S+  + GE+F+Q+
Sbjct: 347 VNENAGGIIT-------------------AGRAKRSDSQLARNGERFKQL 377


>Glyma11g14960.1 
          Length = 450

 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 36/54 (66%), Positives = 44/54 (81%)

Query: 8   DPNMKTSQALTNFLPLMIGYFALSVPSGLSLYWLTNNILSTAQQVFLQKSGGAK 61
           DP+ K    +  FLPLMIGYF+LSVPSGL++YW  NN+LSTAQQV+L+K GGAK
Sbjct: 291 DPSQKNQLLILKFLPLMIGYFSLSVPSGLTIYWFINNVLSTAQQVWLRKLGGAK 344