Miyakogusa Predicted Gene

Lj0g3v0065769.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0065769.1 tr|D8TT90|D8TT90_VOLCA Inner membrane
ALBINO3-like protein 2, chloroplast (Fragment) OS=Volvox
carte,57.75,3e-17,INNER MEMBRANE ALBINO3-LIKE PROTEIN 1, 2,
CHLOROPLAST,NULL; OXA1,Membrane insertase OXA1/ALB3/YidC; ,CUFF.3066.1
         (186 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g01540.1                                                       280   8e-76
Glyma11g37590.1                                                       257   4e-69
Glyma12g06920.1                                                       131   5e-31
Glyma12g06920.2                                                       131   5e-31
Glyma11g14960.1                                                       127   6e-30

>Glyma18g01540.1 
          Length = 534

 Score =  280 bits (715), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 141/188 (75%), Positives = 156/188 (82%), Gaps = 11/188 (5%)

Query: 1   MAALLPCVPSLVSVPFGNNWSRTHLPHRP--HSFSGST-RHFLRGSLSVARFGLKPGFLP 57
           MAALLPC P++VS P GN  S  H PHRP  H+FSGST RHFLRGSL+VARFG +PGFLP
Sbjct: 1   MAALLPCAPNVVSAPLGNR-STCHFPHRPYSHAFSGSTARHFLRGSLTVARFGFQPGFLP 59

Query: 58  DPDAAAAAEGVIRELFTRAEGFLYTVADAAVPSSDTAGXXXXXXXLHNQNNDWFSGIANY 117
           +PD A   EGV+RELF RAEG LYT+ADAAV SSDT            Q+NDW SGIANY
Sbjct: 60  EPDEA---EGVLRELFGRAEGLLYTIADAAVSSSDTVAASTTA----KQSNDWLSGIANY 112

Query: 118 METVLKILKDGLSSVHVPYAYGFAIILLTVLVKAATFPLTKKQVESAMAMRTLQPQIKAI 177
           METVLK+LKDGLS++HVPYAYGFAIILLTVLVKAATFPLTKKQVESA+AMRTLQPQ+KAI
Sbjct: 113 METVLKVLKDGLSALHVPYAYGFAIILLTVLVKAATFPLTKKQVESALAMRTLQPQVKAI 172

Query: 178 QQRYAGDQ 185
           QQ+YAGDQ
Sbjct: 173 QQQYAGDQ 180


>Glyma11g37590.1 
          Length = 543

 Score =  257 bits (657), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 139/189 (73%), Positives = 155/189 (82%), Gaps = 7/189 (3%)

Query: 1   MAALLPCVPSLVSVPFGNNWSRTHLPHRPHS--FSGST-RHFLRGSLSVARFGLKPGFLP 57
           MAALLPC P++V  P   N S +HLPHRPHS  FSGST RHFLRGSL+VARFG KP FLP
Sbjct: 1   MAALLPCAPNIVYGPLLGNRSTSHLPHRPHSHAFSGSTTRHFLRGSLTVARFGFKPDFLP 60

Query: 58  DPDAAAAAEGVIRELFTRAEGFLYTVADAAVPSSDTAGXXXXXXXLH-NQNNDWFSGIAN 116
           +PD A   EGV+RELF RAEG LYT+ADAAV SS ++            Q+NDW SGIAN
Sbjct: 61  EPDEA---EGVLRELFGRAEGLLYTIADAAVSSSSSSSSDTVAASYAAKQSNDWLSGIAN 117

Query: 117 YMETVLKILKDGLSSVHVPYAYGFAIILLTVLVKAATFPLTKKQVESAMAMRTLQPQIKA 176
           YMETVLK+LKDGLS++HVPYAYGFAIILLTVLVKAATFPLTKKQVES++AMRTLQPQ+KA
Sbjct: 118 YMETVLKVLKDGLSALHVPYAYGFAIILLTVLVKAATFPLTKKQVESSLAMRTLQPQVKA 177

Query: 177 IQQRYAGDQ 185
           IQQRYAGDQ
Sbjct: 178 IQQRYAGDQ 186


>Glyma12g06920.1 
          Length = 450

 Score =  131 bits (329), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 89/188 (47%), Positives = 112/188 (59%), Gaps = 18/188 (9%)

Query: 1   MAALLPCVPSLVSVPFGNNWSRTHLPHRPHSFSGSTRHFLRGSLSVARFGLKPGFLPDPD 60
           MA  L   PS +  P   +  R HLPHR       TR F+   + V+   + P  +    
Sbjct: 1   MAKTLISSPSFIGTPL-PSLPRHHLPHR-------TR-FVTTKVHVSLHEIPP--IQSLS 49

Query: 61  AAAAAEGVIRELFTRAEGFLYTVADAAVPSSDTAGXXXXXXXLH---NQNNDWFSGIANY 117
            +    G++    TRAEG LYT+ADAAV +                  ++  WF  I+  
Sbjct: 50  HSIDFAGIV----TRAEGLLYTLADAAVAADPAVAADTAASTTDAAVQKSGGWFGFISEA 105

Query: 118 METVLKILKDGLSSVHVPYAYGFAIILLTVLVKAATFPLTKKQVESAMAMRTLQPQIKAI 177
           ME VLK+LKDGLS+VHVPYAYGFAIILLTV+VKAAT PLTK+QVES +AM+ LQP+IKAI
Sbjct: 106 MEFVLKVLKDGLSAVHVPYAYGFAIILLTVIVKAATLPLTKQQVESTLAMQNLQPKIKAI 165

Query: 178 QQRYAGDQ 185
           Q RYAG+Q
Sbjct: 166 QDRYAGNQ 173


>Glyma12g06920.2 
          Length = 448

 Score =  131 bits (329), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 89/188 (47%), Positives = 112/188 (59%), Gaps = 18/188 (9%)

Query: 1   MAALLPCVPSLVSVPFGNNWSRTHLPHRPHSFSGSTRHFLRGSLSVARFGLKPGFLPDPD 60
           MA  L   PS +  P   +  R HLPHR       TR F+   + V+   + P  +    
Sbjct: 1   MAKTLISSPSFIGTPL-PSLPRHHLPHR-------TR-FVTTKVHVSLHEIPP--IQSLS 49

Query: 61  AAAAAEGVIRELFTRAEGFLYTVADAAVPSSDTAGXXXXXXXLH---NQNNDWFSGIANY 117
            +    G++    TRAEG LYT+ADAAV +                  ++  WF  I+  
Sbjct: 50  HSIDFAGIV----TRAEGLLYTLADAAVAADPAVAADTAASTTDAAVQKSGGWFGFISEA 105

Query: 118 METVLKILKDGLSSVHVPYAYGFAIILLTVLVKAATFPLTKKQVESAMAMRTLQPQIKAI 177
           ME VLK+LKDGLS+VHVPYAYGFAIILLTV+VKAAT PLTK+QVES +AM+ LQP+IKAI
Sbjct: 106 MEFVLKVLKDGLSAVHVPYAYGFAIILLTVIVKAATLPLTKQQVESTLAMQNLQPKIKAI 165

Query: 178 QQRYAGDQ 185
           Q RYAG+Q
Sbjct: 166 QDRYAGNQ 173


>Glyma11g14960.1 
          Length = 450

 Score =  127 bits (319), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 71/117 (60%), Positives = 85/117 (72%), Gaps = 3/117 (2%)

Query: 72  LFTRAEGFLYTVADAAVPSSDTAGXXXXXXXLH---NQNNDWFSGIANYMETVLKILKDG 128
           + TRAEG LYT+ADAAV +                  ++  WF  I+  ME VLK+LKDG
Sbjct: 57  IVTRAEGLLYTLADAAVAADPAVAADSAASTTDAAVQKSGGWFGFISEAMEFVLKVLKDG 116

Query: 129 LSSVHVPYAYGFAIILLTVLVKAATFPLTKKQVESAMAMRTLQPQIKAIQQRYAGDQ 185
           LS+VHVPYAYGFAIILLTV+VKAAT PLTK+QVES +AM+ LQP+IKAIQ RYAG+Q
Sbjct: 117 LSAVHVPYAYGFAIILLTVIVKAATLPLTKQQVESTLAMQNLQPKIKAIQDRYAGNQ 173