Miyakogusa Predicted Gene

Lj0g3v0064039.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0064039.1 Non Chatacterized Hit- tr|B9TBG0|B9TBG0_RICCO
Putative uncharacterized protein (Fragment)
OS=Ricinus,75,9e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL,CUFF.3015.1
         (457 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g22260.1                                                       852   0.0  

>Glyma09g22260.1 
          Length = 1616

 Score =  852 bits (2202), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 406/465 (87%), Positives = 425/465 (91%), Gaps = 9/465 (1%)

Query: 1   MQAPTPASPLTSVHSIGSPAQPTIESLSYATLSPVKXXXXXXXXXXXKLRGSPSVRNNDI 60
            Q+  PASPLTSVH+IGSPAQ T+E LS A +SPVK           KLRGSPSVR NDI
Sbjct: 144 FQSSNPASPLTSVHTIGSPAQSTMEPLSCAAMSPVKSSDISSAGQQSKLRGSPSVRTNDI 203

Query: 61  SNSSLRQLCCKIILTGLEVSLKPVTYAEIFHHMLNWLVNWDQRQQGVDETDILKSWRPDK 120
           SNSSLRQLCCKIILTGLE SLKPVTYAEIF++MLNWLVNWDQRQQG+DE+D++KSWRPDK
Sbjct: 204 SNSSLRQLCCKIILTGLEFSLKPVTYAEIFNYMLNWLVNWDQRQQGIDESDVIKSWRPDK 263

Query: 121 AVIAWLHSCLDVIWLLVDEGKCRVPFYELLRSDLQFIENIPDDEALFTLILEIHRRRDMM 180
           AVIAWLHSCLDVIWLLVDEGKCRVPFYELLRSDLQFIENIPDDEALFTLILEIHRRRDMM
Sbjct: 264 AVIAWLHSCLDVIWLLVDEGKCRVPFYELLRSDLQFIENIPDDEALFTLILEIHRRRDMM 323

Query: 181 AMHMQMLDQHLHCPTFGTHRILNQTTPNISGEAAAHLRLSPISYLSVLGEPLHAEDITNS 240
           AMHMQMLDQHLHCPTFGTHRILNQT PN+SGEA AHLRLSPI+YLSVLGEPLH EDI +S
Sbjct: 324 AMHMQMLDQHLHCPTFGTHRILNQTIPNVSGEAVAHLRLSPITYLSVLGEPLHGEDIASS 383

Query: 241 IQKGSLDWERAVRCIRHALRTTPSPDWWRRVLVLAPCYRPSSQAPTAGAVFSSEMICEAT 300
           IQKGSLDWERAVRCIRHALRTTPSPDWWRRVLVLAPCYR SSQ PTAGAVFSSEMICEAT
Sbjct: 384 IQKGSLDWERAVRCIRHALRTTPSPDWWRRVLVLAPCYRNSSQGPTAGAVFSSEMICEAT 443

Query: 301 IDRIVELLKLTNSE---------INCWQDWLVFSDIFYFLVKSGCIDFVDFVDKLVSRLT 351
           IDRIVELLK+TNS          INCWQDWLVFSDIFYFL+KSGCIDFVDFVDKLVSRLT
Sbjct: 444 IDRIVELLKMTNSGNNLLSLSLYINCWQDWLVFSDIFYFLIKSGCIDFVDFVDKLVSRLT 503

Query: 352 EGDQHILKTNHVTWLLAQIIRIELVMNALNLDSRKVETTRKILSFHREDRSSDPNNPQSI 411
           EGD HILKTNHVTWLLAQIIRIELVMNALN D RKVETTRKILSFHREDRSSDPNNPQSI
Sbjct: 504 EGDHHILKTNHVTWLLAQIIRIELVMNALNSDPRKVETTRKILSFHREDRSSDPNNPQSI 563

Query: 412 LLEFVSSCQNLRIWSLNTTAREYLNSEQLQKGKQIDEWWRQASKG 456
           LL+FVSSCQNLRIWSLN++ REYLN+EQLQKGKQIDEWWRQASKG
Sbjct: 564 LLDFVSSCQNLRIWSLNSSTREYLNNEQLQKGKQIDEWWRQASKG 608