Miyakogusa Predicted Gene

Lj0g3v0063949.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0063949.1 Non Chatacterized Hit- tr|C6TAG4|C6TAG4_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2
S,85.1,0,18S_RNA_Rcl1p: 18S rRNA biogenesis protein RCL1,RNA
3'-terminal phosphate cyclase type 2; RNA 3' TER,CUFF.2925.1
         (258 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g24750.2                                                       461   e-130
Glyma13g24750.1                                                       461   e-130
Glyma01g34420.1                                                       442   e-124
Glyma14g35280.1                                                       297   8e-81

>Glyma13g24750.2 
          Length = 379

 Score =  461 bits (1186), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 218/255 (85%), Positives = 238/255 (93%)

Query: 1   MGKMAYKRLKGSQSFRQRLLLATLSSTPILIEDIRADETWPGLHSHEISLLRLFEMVCDD 60
           MGK AYKRLKGSQSFRQRLLL+TLSSTPILIEDIRADETWPGL +HEISLLRLFE VCDD
Sbjct: 1   MGKTAYKRLKGSQSFRQRLLLSTLSSTPILIEDIRADETWPGLRNHEISLLRLFETVCDD 60

Query: 61  CHVEINETGTKLKYKPGTIMGGKQYHAHECGLSRSIGYFLEPLIVLGLFAKEPLTIKLKG 120
           CHVEINETGTKLKYKPGTIMGG+Q+  H+CG+SRSIGYFLEPLIVL LFAK+PLTI+LKG
Sbjct: 61  CHVEINETGTKLKYKPGTIMGGRQHSPHDCGVSRSIGYFLEPLIVLCLFAKQPLTIRLKG 120

Query: 121 ITNDSKDPSVDTFKSTAFPILKRFGVPSEGLDLKIESRGVPPNGGGEVTLSLPVVQSLMA 180
           ITNDSKDPSVDTFKST  PILKRFGVPSEGL++K+ESRG+PPNGGGEV LS+PVVQSL A
Sbjct: 121 ITNDSKDPSVDTFKSTTLPILKRFGVPSEGLEIKVESRGLPPNGGGEVLLSVPVVQSLTA 180

Query: 181 VNWIDEGFVKKIRGTTFSVRVSTQFENSMIKATRGIVNPLLSDVHLFSDHRSGPQAGNSP 240
           V+WIDEGFV+KIRGT+FS RVS QFE  MIKA RGI+NPL+SDVH+FSDHRSGP+AGNSP
Sbjct: 181 VSWIDEGFVRKIRGTSFSTRVSVQFEYGMIKAARGIINPLVSDVHIFSDHRSGPEAGNSP 240

Query: 241 GYGISLVAETTSGAL 255
           GYGISLVAETTSG  
Sbjct: 241 GYGISLVAETTSGCF 255


>Glyma13g24750.1 
          Length = 379

 Score =  461 bits (1186), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 218/255 (85%), Positives = 238/255 (93%)

Query: 1   MGKMAYKRLKGSQSFRQRLLLATLSSTPILIEDIRADETWPGLHSHEISLLRLFEMVCDD 60
           MGK AYKRLKGSQSFRQRLLL+TLSSTPILIEDIRADETWPGL +HEISLLRLFE VCDD
Sbjct: 1   MGKTAYKRLKGSQSFRQRLLLSTLSSTPILIEDIRADETWPGLRNHEISLLRLFETVCDD 60

Query: 61  CHVEINETGTKLKYKPGTIMGGKQYHAHECGLSRSIGYFLEPLIVLGLFAKEPLTIKLKG 120
           CHVEINETGTKLKYKPGTIMGG+Q+  H+CG+SRSIGYFLEPLIVL LFAK+PLTI+LKG
Sbjct: 61  CHVEINETGTKLKYKPGTIMGGRQHSPHDCGVSRSIGYFLEPLIVLCLFAKQPLTIRLKG 120

Query: 121 ITNDSKDPSVDTFKSTAFPILKRFGVPSEGLDLKIESRGVPPNGGGEVTLSLPVVQSLMA 180
           ITNDSKDPSVDTFKST  PILKRFGVPSEGL++K+ESRG+PPNGGGEV LS+PVVQSL A
Sbjct: 121 ITNDSKDPSVDTFKSTTLPILKRFGVPSEGLEIKVESRGLPPNGGGEVLLSVPVVQSLTA 180

Query: 181 VNWIDEGFVKKIRGTTFSVRVSTQFENSMIKATRGIVNPLLSDVHLFSDHRSGPQAGNSP 240
           V+WIDEGFV+KIRGT+FS RVS QFE  MIKA RGI+NPL+SDVH+FSDHRSGP+AGNSP
Sbjct: 181 VSWIDEGFVRKIRGTSFSTRVSVQFEYGMIKAARGIINPLVSDVHIFSDHRSGPEAGNSP 240

Query: 241 GYGISLVAETTSGAL 255
           GYGISLVAETTSG  
Sbjct: 241 GYGISLVAETTSGCF 255


>Glyma01g34420.1 
          Length = 372

 Score =  442 bits (1136), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 208/248 (83%), Positives = 230/248 (92%)

Query: 8   RLKGSQSFRQRLLLATLSSTPILIEDIRADETWPGLHSHEISLLRLFEMVCDDCHVEINE 67
           RLKGS+SFRQRLLL+TLSSTPILIEDIRADETWPGL +HEISLLRLFE VCDDC VE NE
Sbjct: 1   RLKGSRSFRQRLLLSTLSSTPILIEDIRADETWPGLRNHEISLLRLFETVCDDCQVEFNE 60

Query: 68  TGTKLKYKPGTIMGGKQYHAHECGLSRSIGYFLEPLIVLGLFAKEPLTIKLKGITNDSKD 127
           TGTKLKYKPGTIMGG+Q+ AH+CG+SRSIGYFLEPLIVL LFAK+PLTI+LKGITNDSKD
Sbjct: 61  TGTKLKYKPGTIMGGRQHSAHDCGVSRSIGYFLEPLIVLCLFAKQPLTIRLKGITNDSKD 120

Query: 128 PSVDTFKSTAFPILKRFGVPSEGLDLKIESRGVPPNGGGEVTLSLPVVQSLMAVNWIDEG 187
           PS+DTFKST  PILKRFGVP E L+LK+ESRG+PPNGGGEV LS+PVVQ+L AV+WIDEG
Sbjct: 121 PSIDTFKSTTLPILKRFGVPFEDLELKVESRGLPPNGGGEVVLSVPVVQNLTAVSWIDEG 180

Query: 188 FVKKIRGTTFSVRVSTQFENSMIKATRGIVNPLLSDVHLFSDHRSGPQAGNSPGYGISLV 247
           FV+KIRGTTFS RVS QFE SMIK+ RGI+NPL+SDVH+FSDHRSGP+AGNSPGYGISLV
Sbjct: 181 FVRKIRGTTFSTRVSVQFEYSMIKSARGIINPLVSDVHIFSDHRSGPEAGNSPGYGISLV 240

Query: 248 AETTSGAL 255
           AETTSG  
Sbjct: 241 AETTSGCF 248


>Glyma14g35280.1 
          Length = 283

 Score =  297 bits (760), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 141/186 (75%), Positives = 162/186 (87%), Gaps = 3/186 (1%)

Query: 70  TKLKYKPGTIMGGKQYHAHECGLSRSIGYFLEPLIVLGLFAKEPLTIKLKGITNDSKDPS 129
           TKLKYKPGTIMGG+Q+ AH+CG+S SIGYFLEP I+L LFAK+PLTI+LKGITNDSKDPS
Sbjct: 53  TKLKYKPGTIMGGRQHSAHDCGVSWSIGYFLEPRIMLCLFAKQPLTIRLKGITNDSKDPS 112

Query: 130 VDTFKSTAFPILKRFGVPSEGLDLKIESRGVPPNGGGEVTLSLPVVQSLMAVNWIDEGFV 189
           VDTFKST  PILKRFGVPSEGL++K+ES G+PPNGG EV LS+PVVQSL  ++WIDEGFV
Sbjct: 113 VDTFKSTTLPILKRFGVPSEGLEIKVESHGLPPNGGSEVLLSVPVVQSLTVISWIDEGFV 172

Query: 190 KKIRGTTFSVRVSTQFENSMIKATRGIVNPLLSDVHLFSDHRSGPQAGNSPGYGISLVAE 249
           +KIRGT+FS R+S QFE  MIK  RGI+NPL+SDVH+FSDHRSGP+AG    YGISLV E
Sbjct: 173 RKIRGTSFSTRMSVQFEYGMIKVARGIINPLVSDVHIFSDHRSGPEAGK---YGISLVVE 229

Query: 250 TTSGAL 255
           TTSG  
Sbjct: 230 TTSGCF 235