Miyakogusa Predicted Gene

Lj0g3v0063869.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0063869.1 Non Chatacterized Hit- tr|D7TF60|D7TF60_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,83.41,0,AA_TRNA_LIGASE_I,Aminoacyl-tRNA synthetase, class I,
conserved site; TRNASYNTHVAL,Valine-tRNA ligase,CUFF.2934.1
         (426 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g38450.2                                                       317   1e-86
Glyma10g38450.1                                                       317   1e-86
Glyma17g24050.1                                                       270   2e-72
Glyma17g24010.1                                                       103   3e-22
Glyma17g02970.1                                                        99   8e-21
Glyma17g02970.2                                                        99   1e-20
Glyma04g08080.1                                                        82   9e-16
Glyma11g09990.1                                                        79   1e-14
Glyma12g02330.1                                                        77   3e-14
Glyma07g39300.2                                                        65   1e-10
Glyma07g39300.1                                                        65   1e-10
Glyma08g34780.1                                                        62   2e-09

>Glyma10g38450.2 
          Length = 1050

 Score =  317 bits (813), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 169/382 (44%), Positives = 233/382 (60%), Gaps = 23/382 (6%)

Query: 65  EIAKSFDFSAEERI-YNWWESQGYFKPTFDRGSDPFVISMPPPNVTGSLHMGHAMFVTLE 123
           ++AK +  +A E+  Y WWE   YF    +    PFVI +PPPNVTG+LH+GHA+   +E
Sbjct: 97  QMAKQYSPTAVEKSWYEWWEESQYFVADANSSKPPFVIVLPPPNVTGALHIGHALTAAIE 156

Query: 124 DIMVRYNRMKGRPTLWLPGTDHAGIATQLVVERMLASE-GIKRVEMTRDEFTTRVWQWKE 182
           D M+R+ RM G   LW+PG DHAGIATQ+VVE+ L  E  + R ++ R++F + VW+WK 
Sbjct: 157 DTMIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLFREKNLTRHDLGREKFVSEVWEWKH 216

Query: 183 KYGGTITNQIKRLGASCDWSREHFTLDEQLSHAVVEAFVRLHEKGLIYQGSYMVNWSPTL 242
           KYGGTI  Q++RLGAS DWSRE FT+DE+ S AV EAFVRL+++GLIY+   +VNW   L
Sbjct: 217 KYGGTILQQLRRLGASLDWSRECFTMDERRSKAVTEAFVRLYKQGLIYRDLRLVNWDCVL 276

Query: 243 QTAVSDLEVEYSE----------------ESGYLYYIRYRIAGGSRSDYLTVATTRPETL 286
           +TA+SD+EV+Y E                E G L    Y + G      + VATTR ET+
Sbjct: 277 RTAISDIEVDYLEIKERSLLKVPGYDKPVEFGVLTKFAYPLEGNLGE--IVVATTRIETM 334

Query: 287 FGDVALAVNPHDDRYSKYIGQMAIVPQTFGRHVPIIYDK-HVDKEFGTGVLKISPGHDHN 345
            GD A+AV+P+DDRYS + G+ AI P   GR +PII D   VD +FGTG +KI+P HD N
Sbjct: 335 LGDTAIAVHPNDDRYSHFHGKYAIHPFN-GRKLPIICDAILVDPKFGTGAVKITPAHDPN 393

Query: 346 DYLLARKLGLPILNVMNKDGTLNDVAGL-YSGLDRFXXXXXXXXXXXXTGLAVKKEPHTL 404
           D+ + ++  L  +NV   DG +N   G  + G+ RF              L    E + +
Sbjct: 394 DFEVGKRHNLEFINVFTDDGKINSNGGSDFLGMLRFKAREAVAEALQKKDLYRGSENNEM 453

Query: 405 RVPRSQRGGEVIEPLVSKQWFV 426
           R+    R  +V+EP++  QW+V
Sbjct: 454 RLGVCSRSNDVVEPMIKPQWYV 475


>Glyma10g38450.1 
          Length = 1050

 Score =  317 bits (813), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 169/382 (44%), Positives = 233/382 (60%), Gaps = 23/382 (6%)

Query: 65  EIAKSFDFSAEERI-YNWWESQGYFKPTFDRGSDPFVISMPPPNVTGSLHMGHAMFVTLE 123
           ++AK +  +A E+  Y WWE   YF    +    PFVI +PPPNVTG+LH+GHA+   +E
Sbjct: 97  QMAKQYSPTAVEKSWYEWWEESQYFVADANSSKPPFVIVLPPPNVTGALHIGHALTAAIE 156

Query: 124 DIMVRYNRMKGRPTLWLPGTDHAGIATQLVVERMLASE-GIKRVEMTRDEFTTRVWQWKE 182
           D M+R+ RM G   LW+PG DHAGIATQ+VVE+ L  E  + R ++ R++F + VW+WK 
Sbjct: 157 DTMIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLFREKNLTRHDLGREKFVSEVWEWKH 216

Query: 183 KYGGTITNQIKRLGASCDWSREHFTLDEQLSHAVVEAFVRLHEKGLIYQGSYMVNWSPTL 242
           KYGGTI  Q++RLGAS DWSRE FT+DE+ S AV EAFVRL+++GLIY+   +VNW   L
Sbjct: 217 KYGGTILQQLRRLGASLDWSRECFTMDERRSKAVTEAFVRLYKQGLIYRDLRLVNWDCVL 276

Query: 243 QTAVSDLEVEYSE----------------ESGYLYYIRYRIAGGSRSDYLTVATTRPETL 286
           +TA+SD+EV+Y E                E G L    Y + G      + VATTR ET+
Sbjct: 277 RTAISDIEVDYLEIKERSLLKVPGYDKPVEFGVLTKFAYPLEGNLGE--IVVATTRIETM 334

Query: 287 FGDVALAVNPHDDRYSKYIGQMAIVPQTFGRHVPIIYDK-HVDKEFGTGVLKISPGHDHN 345
            GD A+AV+P+DDRYS + G+ AI P   GR +PII D   VD +FGTG +KI+P HD N
Sbjct: 335 LGDTAIAVHPNDDRYSHFHGKYAIHPFN-GRKLPIICDAILVDPKFGTGAVKITPAHDPN 393

Query: 346 DYLLARKLGLPILNVMNKDGTLNDVAGL-YSGLDRFXXXXXXXXXXXXTGLAVKKEPHTL 404
           D+ + ++  L  +NV   DG +N   G  + G+ RF              L    E + +
Sbjct: 394 DFEVGKRHNLEFINVFTDDGKINSNGGSDFLGMLRFKAREAVAEALQKKDLYRGSENNEM 453

Query: 405 RVPRSQRGGEVIEPLVSKQWFV 426
           R+    R  +V+EP++  QW+V
Sbjct: 454 RLGVCSRSNDVVEPMIKPQWYV 475


>Glyma17g24050.1 
          Length = 297

 Score =  270 bits (690), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 130/175 (74%), Positives = 142/175 (81%), Gaps = 25/175 (14%)

Query: 28  NPLLFYTRRRAIPCCRRFTTTRLLAVAAS------------------ENGVFTSPEIAKS 69
           NPLLF+TR      CRR  + RL+ +  S                  ENGVFTSPE+AKS
Sbjct: 26  NPLLFFTR------CRR-RSLRLIPLPLSNNKIFFFFSFFNFAASERENGVFTSPEVAKS 78

Query: 70  FDFSAEERIYNWWESQGYFKPTFDRGSDPFVISMPPPNVTGSLHMGHAMFVTLEDIMVRY 129
           FDF+AEERIYNWWESQGYF+P+FDRGSDPFVI MPPPNVTGSLHMGHAMFVTLEDIM+RY
Sbjct: 79  FDFAAEERIYNWWESQGYFRPSFDRGSDPFVIPMPPPNVTGSLHMGHAMFVTLEDIMIRY 138

Query: 130 NRMKGRPTLWLPGTDHAGIATQLVVERMLASEGIKRVEMTRDEFTTRVWQWKEKY 184
           NRMKGRPTLWLPGTDHAGIATQLVVERMLASEG+KR E++RDEFT RVWQWKEKY
Sbjct: 139 NRMKGRPTLWLPGTDHAGIATQLVVERMLASEGVKRTELSRDEFTKRVWQWKEKY 193


>Glyma17g24010.1 
          Length = 110

 Score =  103 bits (257), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 47/50 (94%), Positives = 48/50 (96%)

Query: 183 KYGGTITNQIKRLGASCDWSREHFTLDEQLSHAVVEAFVRLHEKGLIYQG 232
           +YGGTI NQIKRLGASCDWSREHFTLDEQLS AVVEAFVRLHEKGLIYQG
Sbjct: 59  RYGGTIANQIKRLGASCDWSREHFTLDEQLSQAVVEAFVRLHEKGLIYQG 108


>Glyma17g02970.1 
          Length = 1116

 Score = 99.4 bits (246), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 125/256 (48%), Gaps = 35/256 (13%)

Query: 75  EERIYNWWESQGYFKPTFDRGS-DPFVISMPPPNVTGSLHMGHAMFVTLEDIMVRYNRMK 133
           E  I   WE    FK   ++ S + F++   PP   G LH+GHA+   L+DI+ RY  ++
Sbjct: 125 EPEIQKIWEENQVFKKVVEKNSGENFILHDGPPYANGDLHIGHALNKILKDIINRYKVLQ 184

Query: 134 GRPTLWLPGTDHAGIATQL---VVERMLASEGIKRV-------------EMTRDEFTTRV 177
                ++PG D  G+  +L    ++   + EG  ++             +  R+E T   
Sbjct: 185 NYKVNFIPGWDCHGLPIELKGKAIDLAYSHEGSGKLFSYCKCIVLQSLDQNARNELTPLK 244

Query: 178 WQWKE-KYGG-TITNQI---KRLGASCDWSREHFTLDEQLSHAVVEAFVRLHEKGLIYQG 232
            + K  K+   T+  Q+   KR G   DW+  + TL+ +   A +E F ++  KG IY+G
Sbjct: 245 LRAKAAKFAKETVKKQMSSFKRYGVWADWNDPYLTLNPEYEAAQIEVFGQMALKGYIYRG 304

Query: 233 SYMVNWSPTLQTAVSDLEVEYSEE--SGYLYYIRYRIAGGSRSD----------YLTVAT 280
              V+WSP+ +TA+++ E+EY E+  S  +Y I +R+     +           YL V T
Sbjct: 305 RKPVHWSPSSRTALAEAELEYPEKHVSRSIYAI-FRVVSAPLTPSSLLQEFPNLYLAVWT 363

Query: 281 TRPETLFGDVALAVNP 296
           T P T+  + A+AVNP
Sbjct: 364 TTPWTIPANAAVAVNP 379



 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 1/63 (1%)

Query: 317 RHVPIIYD-KHVDKEFGTGVLKISPGHDHNDYLLARKLGLPILNVMNKDGTLNDVAGLYS 375
           R  P++    ++  E GTG++  +PGH   DY+  +K GLPIL+ ++ DG   + AG +S
Sbjct: 459 RECPVVIGGDYITTETGTGLVHTAPGHGQEDYVTGQKYGLPILSPVDDDGRFTEEAGQFS 518

Query: 376 GLD 378
           GLD
Sbjct: 519 GLD 521


>Glyma17g02970.2 
          Length = 996

 Score = 99.0 bits (245), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 125/256 (48%), Gaps = 35/256 (13%)

Query: 75  EERIYNWWESQGYFKPTFDRGS-DPFVISMPPPNVTGSLHMGHAMFVTLEDIMVRYNRMK 133
           E  I   WE    FK   ++ S + F++   PP   G LH+GHA+   L+DI+ RY  ++
Sbjct: 135 EPEIQKIWEENQVFKKVVEKNSGENFILHDGPPYANGDLHIGHALNKILKDIINRYKVLQ 194

Query: 134 GRPTLWLPGTDHAGIATQL---VVERMLASEGIKRV-------------EMTRDEFTTRV 177
                ++PG D  G+  +L    ++   + EG  ++             +  R+E T   
Sbjct: 195 NYKVNFIPGWDCHGLPIELKGKAIDLAYSHEGSGKLFSYCKCIVLQSLDQNARNELTPLK 254

Query: 178 WQWKE-KYGG-TITNQI---KRLGASCDWSREHFTLDEQLSHAVVEAFVRLHEKGLIYQG 232
            + K  K+   T+  Q+   KR G   DW+  + TL+ +   A +E F ++  KG IY+G
Sbjct: 255 LRAKAAKFAKETVKKQMSSFKRYGVWADWNDPYLTLNPEYEAAQIEVFGQMALKGYIYRG 314

Query: 233 SYMVNWSPTLQTAVSDLEVEYSEE--SGYLYYIRYRIAGGSRSD----------YLTVAT 280
              V+WSP+ +TA+++ E+EY E+  S  +Y I +R+     +           YL V T
Sbjct: 315 RKPVHWSPSSRTALAEAELEYPEKHVSRSIYAI-FRVVSAPLTPSSLLQEFPNLYLAVWT 373

Query: 281 TRPETLFGDVALAVNP 296
           T P T+  + A+AVNP
Sbjct: 374 TTPWTIPANAAVAVNP 389



 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 1/63 (1%)

Query: 317 RHVPIIYD-KHVDKEFGTGVLKISPGHDHNDYLLARKLGLPILNVMNKDGTLNDVAGLYS 375
           R  P++    ++  E GTG++  +PGH   DY+  +K GLPIL+ ++ DG   + AG +S
Sbjct: 469 RECPVVIGGDYITTETGTGLVHTAPGHGQEDYVTGQKYGLPILSPVDDDGRFTEEAGQFS 528

Query: 376 GLD 378
           GLD
Sbjct: 529 GLD 531


>Glyma04g08080.1 
          Length = 544

 Score = 82.4 bits (202), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 10/152 (6%)

Query: 284 ETLFGDVALAVNPHDDRYSKYIGQMAIVPQTFGRHVPIIYDK-HVDKEFGTGVLKISPGH 342
           + L GD A+ V+P+DDRY+ + G+ AI P   GR +PII D   VD +FGT  +KI+P H
Sbjct: 117 QLLLGDTAIVVHPNDDRYTHFHGKYAIHPFN-GRKLPIICDAILVDPKFGTCAVKITPAH 175

Query: 343 DHNDYLLARKLGLPILNVMNKDGTLNDVAGL-YSGLDRFXXXXXXXXXXXXT-------G 394
           D ND+ + ++  L  +NV   DG +N   G  + G+  F                     
Sbjct: 176 DPNDFEVGKRHNLEFINVFTDDGKINSNGGSDFLGMSWFKAQEAIAYALQKKVTILLLES 235

Query: 395 LAVKKEPHTLRVPRSQRGGEVIEPLVSKQWFV 426
           L    E + + +    R  +V+E ++  QW+V
Sbjct: 236 LYRGSENNEMHLGVCLRNNDVVESMIKPQWYV 267


>Glyma11g09990.1 
          Length = 1207

 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 115/260 (44%), Gaps = 15/260 (5%)

Query: 67  AKSFDF-SAEERIYNWWESQGYFKPTFDRGSDP--FVISMPPPNVTGSLHMGHAMFVTLE 123
            K F F   EE+I ++W     F        D   ++    PP  TG  H GH +  T++
Sbjct: 7   GKDFTFPKQEEKILDFWSQIDAFHTQLSLTQDKPEYIFYDGPPFATGLPHYGHILAGTIK 66

Query: 124 DIMVRYNRMKGRPTLWLPGTDHAGIATQLVVERMLASEGIKRVE----MTRDEFTTRVWQ 179
           DI+ RY  M G       G D  G+  +  +++ L   GIK+ E    +  D++      
Sbjct: 67  DIVTRYQSMTGHHVTRRFGWDCHGLPVENEIDKKL---GIKKREDILKLGIDKYNEECRA 123

Query: 180 WKEKYGGTITNQIKRLGASCDWSREHFTLDEQLSHAVVEAFVRLHEKGLIYQGSYMVNWS 239
              +Y       I R G   D+ +++ T+D     +V   F +L +K L+Y+G  ++ +S
Sbjct: 124 IVTRYVSEWETVITRTGRWIDFKKDYKTMDLNFMESVWWVFAQLFKKKLVYKGFKVMPYS 183

Query: 240 PTLQTAVSDLEV--EYSEESGYLYYIRYRIAGGSRSDYLTVATTRPETLFGDVALAVNP- 296
              +T +S+ E    Y + S    +I + + G          TT P TL  ++AL +N  
Sbjct: 184 TGCKTPLSNFEAGQNYKDVSDPEVFITFPVVGDQDDASFVAWTTTPWTLPSNLALCINAN 243

Query: 297 --HDDRYSKYIGQMAIVPQT 314
             +    +KY G++ IV ++
Sbjct: 244 FTYVKVRNKYSGKVYIVAES 263


>Glyma12g02330.1 
          Length = 1182

 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 115/260 (44%), Gaps = 15/260 (5%)

Query: 67  AKSFDF-SAEERIYNWWESQGYFKPTFDRGSDP--FVISMPPPNVTGSLHMGHAMFVTLE 123
            K F F   EE+I + W     F+       D   ++    PP  TG  H GH +  T++
Sbjct: 7   GKDFTFPKQEEKILDLWSQIDAFQTQLSLTKDKPEYIFYDGPPFATGLPHYGHILAGTIK 66

Query: 124 DIMVRYNRMKGRPTLWLPGTDHAGIATQLVVERMLASEGIKRVE----MTRDEFTTRVWQ 179
           DI+ RY+ M G       G D  G+  +  +++ L   GIK+ E    +  D++      
Sbjct: 67  DIVTRYHSMTGHHVTRRFGWDCHGLPVENEIDKKL---GIKKREDVLKLGIDKYNEECRA 123

Query: 180 WKEKYGGTITNQIKRLGASCDWSREHFTLDEQLSHAVVEAFVRLHEKGLIYQGSYMVNWS 239
              +Y       I R G   D+  ++ T+D     +V   F +L EK L+Y+G  ++ +S
Sbjct: 124 IVTRYVSEWETVITRTGRWIDFKNDYKTMDLNFMESVWWVFAQLFEKKLVYKGFKVMPYS 183

Query: 240 PTLQTAVSDLEV--EYSEESGYLYYIRYRIAGGSRSDYLTVATTRPETLFGDVALAVNP- 296
              +T +S+ E    Y + S    ++ + + G          TT P TL  ++AL +N  
Sbjct: 184 TGCKTPLSNFEAGQNYKDVSDPEVFMTFPVLGDQDGASFVAWTTTPWTLPSNLALCINAN 243

Query: 297 --HDDRYSKYIGQMAIVPQT 314
             +    +KY G++ IV ++
Sbjct: 244 FTYVKVRNKYSGKVYIVAES 263


>Glyma07g39300.2 
          Length = 829

 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 69/154 (44%), Gaps = 18/154 (11%)

Query: 99  FVISMPPPNVTGSLHMGHAMFVTLEDIMVRYNRMKGRPTLWLPGTDHAGI-ATQLVVERM 157
           +V+ M P      LH+GH +  T  DI+ RY RM+G   L   G D  G+ A Q  +E  
Sbjct: 118 YVLDMFPYPSGAGLHVGHPLGYTATDILARYKRMQGYNVLHPMGWDAFGLPAEQYAIE-- 175

Query: 158 LASEGIKRVEMTRDEFTTRVWQWKEKYGGTITNQIKRLGASCDWSREHFTLDEQLSHAVV 217
                      T  + TT       +       Q+K LG S DW RE  T++        
Sbjct: 176 ---------TGTHPKLTTV------RNINRFRTQLKSLGFSYDWDREVSTIEPDYYKWTQ 220

Query: 218 EAFVRLHEKGLIYQGSYMVNWSPTLQTAVSDLEV 251
             F++L ++GL YQ    VNW P L T +++ EV
Sbjct: 221 WIFLQLLKRGLAYQAEVPVNWCPALGTVLANEEV 254


>Glyma07g39300.1 
          Length = 972

 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 69/154 (44%), Gaps = 18/154 (11%)

Query: 99  FVISMPPPNVTGSLHMGHAMFVTLEDIMVRYNRMKGRPTLWLPGTDHAGI-ATQLVVERM 157
           +V+ M P      LH+GH +  T  DI+ RY RM+G   L   G D  G+ A Q  +E  
Sbjct: 118 YVLDMFPYPSGAGLHVGHPLGYTATDILARYKRMQGYNVLHPMGWDAFGLPAEQYAIE-- 175

Query: 158 LASEGIKRVEMTRDEFTTRVWQWKEKYGGTITNQIKRLGASCDWSREHFTLDEQLSHAVV 217
                      T  + TT       +       Q+K LG S DW RE  T++        
Sbjct: 176 ---------TGTHPKLTTV------RNINRFRTQLKSLGFSYDWDREVSTIEPDYYKWTQ 220

Query: 218 EAFVRLHEKGLIYQGSYMVNWSPTLQTAVSDLEV 251
             F++L ++GL YQ    VNW P L T +++ EV
Sbjct: 221 WIFLQLLKRGLAYQAEVPVNWCPALGTVLANEEV 254


>Glyma08g34780.1 
          Length = 34

 Score = 61.6 bits (148), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/33 (78%), Positives = 31/33 (93%)

Query: 150 TQLVVERMLASEGIKRVEMTRDEFTTRVWQWKE 182
           +QLVVERMLASEG+KR E++RDEFT RVWQWK+
Sbjct: 1   SQLVVERMLASEGVKRTELSRDEFTKRVWQWKK 33