Miyakogusa Predicted Gene

Lj0g3v0063769.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0063769.1 Non Chatacterized Hit- tr|F6HTH9|F6HTH9_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,39.68,0.0000000000003,seg,NULL,CUFF.2912.1
         (113 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g08030.1                                                        62   1e-10
Glyma08g18900.1                                                        56   1e-08

>Glyma13g08030.1 
          Length = 579

 Score = 62.0 bits (149), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 44/114 (38%), Positives = 64/114 (56%), Gaps = 14/114 (12%)

Query: 1   MFNGLNRIDSSVINVRGSDWAFPQLNSKFPLSQSAASRVKAAF---GAGSIGTTLQS--- 54
           ++NGL++      N  GSD+A  + NSK P   +AA R++A     G G +G+ L+S   
Sbjct: 62  LYNGLHKFS---FNGHGSDFAVVRHNSKVP---NAAGRIRATLTSGGGGDLGSYLKSSGF 115

Query: 55  -DARAFATLGAETGLRS-HXXXXXXXXXXXXIPSEGFSSIADAIEDIRNGKVVL 106
            D  AF TL A+T + +               P+EGF+SI +AIEDIRNGK+V+
Sbjct: 116 LDVIAFGTLRADTAVPAGSGFSDDEDDHDFDSPTEGFASIPEAIEDIRNGKMVV 169


>Glyma08g18900.1 
          Length = 544

 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 19/108 (17%)

Query: 18  SDWAFPQLNSKFPLSQSAASRVKAAFGAGS-------------IGTTL------QSDARA 58
           +D  F ++NSKFP S +A  R+KA   +G              IGT L      Q + + 
Sbjct: 27  NDVPFVRMNSKFPSSDNAFGRIKAMLISGGGELLSHPNGNDIVIGTNLVGDESVQIEVQP 86

Query: 59  FATLGAETGLRSHXXXXXXXXXXXXIPSEGFSSIADAIEDIRNGKVVL 106
             TL  +TGL S+             PS GF+SI +AIEDIR GK+V+
Sbjct: 87  NGTLADDTGLTSNVFSMDNNEFDSDSPSAGFASIPEAIEDIRQGKMVV 134