Miyakogusa Predicted Gene

Lj0g3v0062789.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0062789.1 Non Chatacterized Hit- tr|C5YXD0|C5YXD0_SORBI
Putative uncharacterized protein Sb09g018900
OS=Sorghu,43.7,0.000000000000001,CENTAURIN/ARF-RELATED,NULL;
CENTAURIN/ARF,NULL; seg,NULL,CUFF.2825.1
         (121 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g21510.1                                                       128   2e-30
Glyma04g26700.1                                                       122   1e-28
Glyma13g26860.1                                                       112   1e-25
Glyma15g37880.1                                                       103   3e-23

>Glyma11g21510.1 
          Length = 316

 Score =  128 bits (321), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 68/121 (56%), Positives = 79/121 (65%), Gaps = 8/121 (6%)

Query: 1   MKKPKPHSSIEERSEFIRRKYELLQFMECGDNLSCQIVPSQGRSLTLAHSSSSCHHPPMD 60
           +KKPKP+SSIEER +FIRRKYE LQF+   +NLSC  VPS  R       SSS +  P D
Sbjct: 63  IKKPKPNSSIEERYDFIRRKYEFLQFLNIEENLSCPFVPSHAR-------SSSSNKFPQD 115

Query: 61  KKHYEKKPTKHHIGLTFRNSRGRXXXXXXXXXXXXXXLAGMVEFVGLIKVTVVKGKHLAV 120
           KKHY+K+ TK  IG  FRNS GR              LAGMVEF+GLIKV VVKG +LA+
Sbjct: 116 KKHYDKQATKSRIGSAFRNSWGR-KDSEHKSSKKSNSLAGMVEFIGLIKVNVVKGTNLAI 174

Query: 121 R 121
           R
Sbjct: 175 R 175


>Glyma04g26700.1 
          Length = 282

 Score =  122 bits (306), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 64/121 (52%), Positives = 78/121 (64%), Gaps = 13/121 (10%)

Query: 1   MKKPKPHSSIEERSEFIRRKYELLQFMECGDNLSCQIVPSQGRSLTLAHSSSSCHHPPMD 60
           +KKPKP+SSIEERS+FIRRKYE LQF++  +NLSC               SSS ++ P D
Sbjct: 38  IKKPKPNSSIEERSDFIRRKYEFLQFLDIEENLSC------------PFRSSSSNNFPQD 85

Query: 61  KKHYEKKPTKHHIGLTFRNSRGRXXXXXXXXXXXXXXLAGMVEFVGLIKVTVVKGKHLAV 120
           KKHY+K+ TK  IG TFRNS GR              LAGM+EF+GLIKV VVKG +L +
Sbjct: 86  KKHYDKQETKSLIGSTFRNSWGR-KDSEHKSSKKSNSLAGMIEFIGLIKVNVVKGTNLVI 144

Query: 121 R 121
           R
Sbjct: 145 R 145


>Glyma13g26860.1 
          Length = 284

 Score =  112 bits (279), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 60/121 (49%), Positives = 77/121 (63%), Gaps = 9/121 (7%)

Query: 1   MKKPKPHSSIEERSEFIRRKYELLQFMECGDNLSCQIVPSQGRSLTLAHSSSSCHHPPMD 60
           ++KPKPHSSIEERSEFIRRKYE+ QF++C DNLSC I+PSQGRS++LA + ++       
Sbjct: 38  IRKPKPHSSIEERSEFIRRKYEMQQFVDCDDNLSCPIIPSQGRSISLALAQTNIVLGTHS 97

Query: 61  KKHYEKKPTKHHIGLTFRNSRGRXXXXXXXXXXXXXXLAGMVEFVGLIKVTVVKGKHLAV 120
           +   E+K           ++R +               AGMVEFVGLIKV VVKG HLA+
Sbjct: 98  ETAGEEK---------ILSTRLQRRVPLWFLCDYKILYAGMVEFVGLIKVNVVKGTHLAI 148

Query: 121 R 121
           R
Sbjct: 149 R 149


>Glyma15g37880.1 
          Length = 271

 Score =  103 bits (258), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 58/121 (47%), Positives = 74/121 (61%), Gaps = 22/121 (18%)

Query: 1   MKKPKPHSSIEERSEFIRRKYELLQFMECGDNLSCQIVPSQGRSLTLAHSSSSCHHPPMD 60
           ++KPKPHSSIEERSEFIRRKYE+ QF+   D LSC IVPSQGRS++LA + ++     + 
Sbjct: 38  IRKPKPHSSIEERSEFIRRKYEMQQFIGYDDGLSCPIVPSQGRSISLALAQTNI----VL 93

Query: 61  KKHYEKKPTKHHIGLTFRNSRGRXXXXXXXXXXXXXXLAGMVEFVGLIKVTVVKGKHLAV 120
           + H E    +  +  + +                    AGMVEFVGLIKV VVKG HLA+
Sbjct: 94  ETHSETAGEEKILSTSLQRK------------------AGMVEFVGLIKVNVVKGTHLAI 135

Query: 121 R 121
           R
Sbjct: 136 R 136