Miyakogusa Predicted Gene

Lj0g3v0059629.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0059629.1 tr|H7G0V2|H7G0V2_9LACO ATPase of the AAA+ class
OS=Lactobacillus salivarius SMXD51 GN=SMXD51_07787
P,33.33,3.1,seg,NULL; coiled-coil,NULL,CUFF.2639.1
         (159 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g16520.1                                                       210   5e-55
Glyma09g05200.1                                                       183   6e-47
Glyma15g16520.2                                                       173   9e-44

>Glyma15g16520.1 
          Length = 156

 Score =  210 bits (535), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 113/158 (71%), Positives = 123/158 (77%), Gaps = 3/158 (1%)

Query: 1   MAKEIESLSEDERRALRGSKFAPLPPRAPSRTQPRLAHPGGPLATNKAAALAKFLERKLK 60
           M KEIE+L+EDERRALRGSKFAPLP R  S ++PRLAHP GPLATNKAAALAKFLERKLK
Sbjct: 1   MVKEIENLTEDERRALRGSKFAPLPRR--SNSKPRLAHPCGPLATNKAAALAKFLERKLK 58

Query: 61  EPNGMDHINPDLLELAVNNAKQTVYASSASTSKRTVRHVEFFGDSDSKDSAEEQNELSEV 120
           +PNG+  INPDLLELAVNNAK+TVYAS AS S+R VRHV+ FGDSDSKDS+EEQNELSEV
Sbjct: 59  DPNGLASINPDLLELAVNNAKETVYASGASNSQRNVRHVDSFGDSDSKDSSEEQNELSEV 118

Query: 121 XXXXXXXXXXXXXXXXXXXXDVEDLGCAVVKKPKQKFK 158
                                 ED GCAVVKKPKQKFK
Sbjct: 119 KESKKKKKKKEKKKNKKRKN-SEDPGCAVVKKPKQKFK 155


>Glyma09g05200.1 
          Length = 161

 Score =  183 bits (465), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 104/162 (64%), Positives = 115/162 (70%), Gaps = 6/162 (3%)

Query: 1   MAKEIESLSEDERRALRGSKFAPLPPRAPSRTQPRLAHPGGPLATNKAAALAKFLERKLK 60
           M KEIE+L+EDERRALRGSKFAPLP   PS ++PRLAHPGGPLATNKAAALAKFLERKLK
Sbjct: 1   MVKEIETLTEDERRALRGSKFAPLP--RPSNSKPRLAHPGGPLATNKAAALAKFLERKLK 58

Query: 61  EPNGMDHINPDLLELAVNNAKQTVYASSASTSKRTVRHV-EFFGDSDSKDSAEEQNELSE 119
           +PNG+  INPD+LELAVNNAK+TVYAS  S S+R VRHV  F        S EEQNELSE
Sbjct: 59  DPNGLASINPDILELAVNNAKETVYASGTSNSRRNVRHVDSFGDSDSKDSSDEEQNELSE 118

Query: 120 V---XXXXXXXXXXXXXXXXXXXXDVEDLGCAVVKKPKQKFK 158
           V                       + ED GCAV+KKPKQKFK
Sbjct: 119 VKECKKKKKKKKKKKEKNKNKKPKNTEDPGCAVMKKPKQKFK 160


>Glyma15g16520.2 
          Length = 109

 Score =  173 bits (438), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 87/108 (80%), Positives = 96/108 (88%), Gaps = 2/108 (1%)

Query: 1   MAKEIESLSEDERRALRGSKFAPLPPRAPSRTQPRLAHPGGPLATNKAAALAKFLERKLK 60
           M KEIE+L+EDERRALRGSKFAPLP R  S ++PRLAHP GPLATNKAAALAKFLERKLK
Sbjct: 1   MVKEIENLTEDERRALRGSKFAPLPRR--SNSKPRLAHPCGPLATNKAAALAKFLERKLK 58

Query: 61  EPNGMDHINPDLLELAVNNAKQTVYASSASTSKRTVRHVEFFGDSDSK 108
           +PNG+  INPDLLELAVNNAK+TVYAS AS S+R VRHV+ FGDSDSK
Sbjct: 59  DPNGLASINPDLLELAVNNAKETVYASGASNSQRNVRHVDSFGDSDSK 106