Miyakogusa Predicted Gene

Lj0g3v0058969.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0058969.1 Non Chatacterized Hit- tr|I1L3L8|I1L3L8_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,43.14,5e-17,ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT
CLPX,Clp protease, ATP-binding subunit ClpX; HSL AND ,CUFF.2633.1
         (566 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g28260.1                                                       546   e-155
Glyma20g35600.1                                                       520   e-147
Glyma06g13450.1                                                       509   e-144
Glyma16g33080.1                                                       504   e-142
Glyma04g41400.1                                                       503   e-142
Glyma10g32040.1                                                       374   e-103
Glyma07g40220.1                                                        84   3e-16

>Glyma09g28260.1 
          Length = 659

 Score =  546 bits (1406), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 275/375 (73%), Positives = 315/375 (84%), Gaps = 7/375 (1%)

Query: 185 IFNALNQFVVGQEKPKKLLSVAVYNHYIRLRLATTQPESQSSD------QDTDLVQPEKS 238
           I   L++FV+GQ++ KK+LSVAVYNHY R+  AT Q  S +         D D V+ EKS
Sbjct: 247 ICKGLDKFVIGQQRAKKVLSVAVYNHYKRIYHATLQKGSAADSGASEVLDDDDNVELEKS 306

Query: 239 NVLLIGPTGSGKTLLAKTLARIVNVPFAIADATTFTQAGYVGEDVESILYKLLVEADFDV 298
           NVLL+GPTGSGKTLLAKTLAR VNVPF IADATT TQAGYVGEDVESILYKLLV ADF+V
Sbjct: 307 NVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLVAADFNV 366

Query: 299 ELAQRGIVYVDEVDKITKKGESLNIGRDVSGEGVQQALLKMLESTVVSVPDKGARKHQSG 358
             AQ+GI+Y+DEVDKITKK ESLNI RDVSGEGVQQALLKMLE T+V+VP+KGARK+  G
Sbjct: 367 AAAQQGIIYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKNPRG 426

Query: 359 DSVLIDTKNILFICGGAFVNLEKIISERKQDSSIGFGVPVRANMRACGLPDAAVTSSLLE 418
           D++ +DTKNILFICGGAF++LEK ISER+QDSSIGFG PVRANMRA G+ D+AVTSSLLE
Sbjct: 427 DNIQMDTKNILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRAVGITDSAVTSSLLE 486

Query: 419 NVESGDLIAYGLIPEFVGRFPILAGLSALSEDQLLQVLIEPKNALVKQYKKMFRMNDVNL 478
           +VES DLIAYGLIPEF+GRFPIL  LSAL+EDQL  VL EPKNAL KQYKK+F MN+V L
Sbjct: 487 SVESADLIAYGLIPEFIGRFPILVSLSALTEDQLTMVLTEPKNALGKQYKKLFSMNNVKL 546

Query: 479 HFTDNALRLIAKKAMAKNTGARGLRALLENILTEAMFEVPD-KADIGNIEGVLVDEEAVG 537
           HFT+NALRLIAKKAMAKNTGARGLRALLE+ILTEAMFE+PD K     ++ V++DEE+VG
Sbjct: 547 HFTENALRLIAKKAMAKNTGARGLRALLESILTEAMFEIPDIKTGSDRVDAVVIDEESVG 606

Query: 538 SLNGHGCGAKILYRD 552
           SL   GCG KIL+ D
Sbjct: 607 SLTAPGCGGKILHGD 621



 Score = 93.6 bits (231), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 42/102 (41%), Positives = 58/102 (56%), Gaps = 16/102 (15%)

Query: 60  GYQRRHKWEXXXXXXXXXXXXXIVYYDHIRADMNCPRCSRNMSVIFSNRPLSI------- 112
           G Q R+KW+                   IRA+ NCPRC+++M+++FSNR           
Sbjct: 40  GVQERYKWDRGGSDDTSSR--------KIRAEANCPRCTKDMNLVFSNRHFPTPQIESEL 91

Query: 113 -SGHQPGLYQALNLCPSCKTAFYFRPLKLSPLHGTFIEIARL 153
             G +   YQ++NLCPSCKTA+YFRP   +PL GTF+EI R+
Sbjct: 92  GGGEREKGYQSVNLCPSCKTAYYFRPYDTTPLQGTFVEIGRV 133


>Glyma20g35600.1 
          Length = 506

 Score =  520 bits (1340), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 278/409 (67%), Positives = 318/409 (77%), Gaps = 38/409 (9%)

Query: 185 IFNALNQFVVGQEKPKKLLSVAVYNHYIRLR-----------------LATTQPESQSSD 227
           I   L++FV+GQ + KK+LSVAVYNHY R+                  +   +  SQ  D
Sbjct: 67  ICKGLDKFVIGQHRAKKVLSVAVYNHYQRIYQGSLSFFFRYHTFFIHFVIADEGLSQGLD 126

Query: 228 QDTDLVQPEKSNVLLIGPTGSGKTLLAKTLARIVNVPFAIADATTFTQA----------- 276
            D D V+ EKSNVLL+GPTGSGKTLLAKTLAR VNVPF IADATT TQA           
Sbjct: 127 -DGDDVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAILAISDLVPWF 185

Query: 277 ------GYVGEDVESILYKLLVEADFDVELAQRGIVYVDEVDKITKKGESLNIGRDVSGE 330
                 GYVGEDVESILYKLL  A+F+V+ AQ+GIVY+DEVDKITKK ESLNI RDVSGE
Sbjct: 186 TQGFIAGYVGEDVESILYKLLAAAEFNVQAAQQGIVYIDEVDKITKKAESLNISRDVSGE 245

Query: 331 GVQQALLKMLESTVVSVPDKGARKHQSGDSVLIDTKNILFICGGAFVNLEKIISERKQDS 390
           GVQQALLKMLE T+V+VP++GARKH  GD++ IDTKNILFICGGAF++LEK ISER+QDS
Sbjct: 246 GVQQALLKMLEGTMVNVPERGARKHPRGDNIQIDTKNILFICGGAFIDLEKTISERRQDS 305

Query: 391 SIGFGVPVRANMRACGLPDAAVTSSLLENVESGDLIAYGLIPEFVGRFPILAGLSALSED 450
           SIGFG PVR+NMR  G+ +AAVTSSLLE+VES DLIAYGLIPEF+GRFPIL  LSAL+ED
Sbjct: 306 SIGFGSPVRSNMRTGGVTNAAVTSSLLESVESADLIAYGLIPEFIGRFPILISLSALTED 365

Query: 451 QLLQVLIEPKNALVKQYKKMFRMNDVNLHFTDNALRLIAKKAMAKNTGARGLRALLENIL 510
           QL+QVL EPKNAL KQYKK+F MN+V LHFT+ ALRLIAKKAMAKNTGARGLRALLE+IL
Sbjct: 366 QLMQVLTEPKNALAKQYKKLFNMNNVKLHFTEKALRLIAKKAMAKNTGARGLRALLESIL 425

Query: 511 TEAMFEVPD-KADIGNIEGVLVDEEAVGSLNGHGCGAKILYRDNNGSLE 558
           TEAMFE+PD KA    I  V+VDEE+VGS+N  GCG KIL  D  G+LE
Sbjct: 426 TEAMFEIPDVKAGNELIGAVVVDEESVGSVNAPGCGGKILCGD--GALE 472


>Glyma06g13450.1 
          Length = 524

 Score =  509 bits (1311), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 266/376 (70%), Positives = 310/376 (82%), Gaps = 11/376 (2%)

Query: 185 IFNALNQFVVGQEKPKKLLSVAVYNHYIRLRLATTQPESQSSDQDT---------DLVQP 235
           I   L++FV+GQE+ KK+LSVAVYNHY R+   T+ P+  + D D          D V+ 
Sbjct: 111 ICKGLDKFVIGQERAKKVLSVAVYNHYKRIFNETSLPKWPAGDSDNSVKVDAADDDRVEL 170

Query: 236 EKSNVLLIGPTGSGKTLLAKTLARIVNVPFAIADATTFTQAGYVGEDVESILYKLLVEAD 295
           EKSN+LL+GPTGSGKTLLAKTLAR VNVPF IADAT+ TQAGYVGEDVESILYKLL+ AD
Sbjct: 171 EKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATSLTQAGYVGEDVESILYKLLMVAD 230

Query: 296 FDVELAQRGIVYVDEVDKITKKGESLNIGRDVSGEGVQQALLKMLESTVVSVPDKGARKH 355
           ++V  AQ+GIVY+DEVDKITKK ESLNI RDVSGEGVQQALLKMLE TVV+VP+KGARKH
Sbjct: 231 YNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKH 290

Query: 356 QSGDSVLIDTKNILFICGGAFVNLEKIISERKQDSSIGFGVPVRANMRACGLPDAAVTSS 415
             GD++ IDTKNILFICGGAFV+LEK ISER+ DSSIGFG P+RANMR   + +AAV SS
Sbjct: 291 PRGDNIQIDTKNILFICGGAFVDLEKTISERRHDSSIGFGAPIRANMRTGKVTEAAVASS 350

Query: 416 LLENVESGDLIAYGLIPEFVGRFPILAGLSALSEDQLLQVLIEPKNALVKQYKKMFRMND 475
           LLE VES DLIAYGLIPEFVGRFPIL  LSAL+E+QL+QVL EPKNAL KQYKKMF+MN 
Sbjct: 351 LLETVESSDLIAYGLIPEFVGRFPILVSLSALTENQLIQVLSEPKNALGKQYKKMFQMNG 410

Query: 476 VNLHFTDNALRLIAKKAMAKNTGARGLRALLENILTEAMFEVPD-KADIGNIEGVLVDEE 534
           V LHFT+NALR IA+KA++KNTGARGLR++LEN+L +AM+E+PD + D   I+ V+VDEE
Sbjct: 411 VKLHFTENALRSIARKAISKNTGARGLRSILENVLVDAMYEIPDIRTDDDVIDAVVVDEE 470

Query: 535 AVGSLNGHGCGAKILY 550
           AVG   G G GAKILY
Sbjct: 471 AVGG-EGRGRGAKILY 485


>Glyma16g33080.1 
          Length = 689

 Score =  504 bits (1297), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 264/394 (67%), Positives = 309/394 (78%), Gaps = 22/394 (5%)

Query: 185 IFNALNQFVVGQEKPKKLLSVAVYNHYIRLRLATTQPESQSSD------QDTDLVQPEKS 238
           I   L++FV+GQ++ KK+LSVAVYNHY R+  AT Q  S +         D D V+ EKS
Sbjct: 264 ICKGLDKFVIGQQRAKKVLSVAVYNHYKRIYHATLQKGSAADSGVSEVLDDDDNVELEKS 323

Query: 239 NVLLIGPTGSGKTLLAKTLARIVNVPFAIADATTFTQA------GYVGEDVESILYK--- 289
           NVLL+GPTGSGKTLLAKTLAR VNVPF + DATT TQA       + G  V S++ +   
Sbjct: 324 NVLLMGPTGSGKTLLAKTLARFVNVPFVVTDATTLTQAIVVSNCFWFGFIVGSLVLRQSF 383

Query: 290 ----LLVEADFDVELAQRGIVYVDEVDKITKKGESLNIGRDVSGEGVQQALLKMLESTVV 345
               L   ADF+V  AQ+GI+Y+DEVDKITKK +SLNI RDVSGEGVQQALLKMLE T+V
Sbjct: 384 VVIDLNKAADFNVAAAQQGIIYIDEVDKITKKSKSLNISRDVSGEGVQQALLKMLEGTIV 443

Query: 346 SVPDKGARKHQSGDSVLIDTKNILFICGGAFVNLEKIISERKQDSSIGFGVPVRANMRAC 405
           +VP+KGARKH  GD++ +DTKNILFICGGAF++LEK ISER+QDSSIGFG PVRANMRA 
Sbjct: 444 NVPEKGARKHPRGDNIQMDTKNILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRAG 503

Query: 406 GLPDAAVTSSLLENVESGDLIAYGLIPEFVGRFPILAGLSALSEDQLLQVLIEPKNALVK 465
           G+ D+AVTSSLLE+VES DLIAYGLIPEF+GRFPIL  LSAL+EDQL+ VL EPKNAL K
Sbjct: 504 GITDSAVTSSLLESVESADLIAYGLIPEFIGRFPILVSLSALTEDQLMMVLTEPKNALGK 563

Query: 466 QYKKMFRMNDVNLHFTDNALRLIAKKAMAKNTGARGLRALLENILTEAMFEVPD-KADIG 524
           QYKK+F MN+V LHFT+ ALRLIAKKAMAKNTGARGLRALLENILTEAMFE+PD K    
Sbjct: 564 QYKKLFSMNNVKLHFTEKALRLIAKKAMAKNTGARGLRALLENILTEAMFEIPDIKTGSD 623

Query: 525 NIEGVLVDEEAVGSLNGHGCGAKILYRDNNGSLE 558
            ++ V++DEE+VGSL   GCG KIL  D  G+LE
Sbjct: 624 RVDAVVIDEESVGSLTAPGCGGKILRGD--GALE 655



 Score = 89.0 bits (219), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 42/104 (40%), Positives = 58/104 (55%), Gaps = 18/104 (17%)

Query: 60  GYQRRHKWEXXXXXXXXXXXXXIVYYDHIRADMNCPRCSRNMSVIFSNRPLSI------- 112
           G Q R+KW+                   IRA+ NCPRC+++M+++FSNR           
Sbjct: 40  GVQERYKWDRGGSDDNSTR--------KIRAEANCPRCTKDMNLVFSNRHFPTPSSESEL 91

Query: 113 ---SGHQPGLYQALNLCPSCKTAFYFRPLKLSPLHGTFIEIARL 153
               G +   YQ++NLCPSCKTA+YFRP   +PL GTF+EI R+
Sbjct: 92  GGGGGEKEKGYQSVNLCPSCKTAYYFRPYDTTPLQGTFVEIGRV 135


>Glyma04g41400.1 
          Length = 524

 Score =  503 bits (1295), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 261/377 (69%), Positives = 307/377 (81%), Gaps = 12/377 (3%)

Query: 185 IFNALNQFVVGQEKPKKLLSVAVYNHYIRLRLATTQPESQSSDQDT----------DLVQ 234
           I   L++FV+GQE+ KK+LSVAVYNHY R+   T+  +  + D D           D V+
Sbjct: 110 ICKGLDKFVIGQERAKKVLSVAVYNHYKRIFNETSSSKWPAGDSDNNNVKTDAVDDDRVE 169

Query: 235 PEKSNVLLIGPTGSGKTLLAKTLARIVNVPFAIADATTFTQAGYVGEDVESILYKLLVEA 294
            EKSN+LL+GPTGSGKTLLAKTLAR VNVPF IADAT+ TQAGYVGEDVESILYKLL+ A
Sbjct: 170 LEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATSLTQAGYVGEDVESILYKLLMVA 229

Query: 295 DFDVELAQRGIVYVDEVDKITKKGESLNIGRDVSGEGVQQALLKMLESTVVSVPDKGARK 354
           D++V  AQ+GIVY+DEVDKITKK ESLNI RDVSGEGVQQALLKMLE TVV+VP+KGARK
Sbjct: 230 DYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARK 289

Query: 355 HQSGDSVLIDTKNILFICGGAFVNLEKIISERKQDSSIGFGVPVRANMRACGLPDAAVTS 414
           H  GD++ IDTKNILFICGGAFV+LEK ISE + DSSIGFG P+RANMR   + +AAV S
Sbjct: 290 HPRGDNIQIDTKNILFICGGAFVDLEKTISESRHDSSIGFGAPIRANMRTGKVTEAAVAS 349

Query: 415 SLLENVESGDLIAYGLIPEFVGRFPILAGLSALSEDQLLQVLIEPKNALVKQYKKMFRMN 474
           SLL+ VES DL+AYGLIPEFVGRFPIL  LSAL+E+QL+QVL EPKNAL KQYKKMF+MN
Sbjct: 350 SLLQTVESSDLVAYGLIPEFVGRFPILVSLSALTENQLIQVLTEPKNALGKQYKKMFQMN 409

Query: 475 DVNLHFTDNALRLIAKKAMAKNTGARGLRALLENILTEAMFEVPD-KADIGNIEGVLVDE 533
            V LHFT+NALR IA+KA++KNTGARGLR++LEN+L +AM+E+PD +     I+ V+VDE
Sbjct: 410 GVKLHFTENALRSIARKAISKNTGARGLRSILENVLVDAMYEIPDIRTGDDVIDAVVVDE 469

Query: 534 EAVGSLNGHGCGAKILY 550
           EAVG   G G GAKILY
Sbjct: 470 EAVGG-EGRGRGAKILY 485


>Glyma10g32040.1 
          Length = 413

 Score =  374 bits (959), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 217/396 (54%), Positives = 262/396 (66%), Gaps = 69/396 (17%)

Query: 185 IFNALNQFVVGQEKPKKLLSVAVYNHYIRLRLATTQPESQSSDQDTDLVQPEKSNVLLIG 244
           IF  L++FV+GQ   KK+LSVAVYNHY R+                              
Sbjct: 31  IFKGLDKFVIGQHMAKKVLSVAVYNHYQRIY----------------------------- 61

Query: 245 PTGSGKTLLAKTLARIVNVPFAIADATTFTQAGYVGEDVESILYKLLVEADFDVELAQRG 304
               G      +L   VN    +A    ++ +  V   ++  L ++   A+F+V+ AQ+G
Sbjct: 62  ---HGFLSFFLSLFFSVNSSSTVAKDCPWSFSRRVA--IQMHLVQIFF-AEFNVQAAQQG 115

Query: 305 IVYVDEVDKITKKGESLNIGRDVSGEGVQQALLKMLESTVVSVPDKGARKHQSG------ 358
           I+Y+DEVDKITKK ESLNI RDVSGEGVQQALLKMLE T+V+VP+KGA KH         
Sbjct: 116 IIYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGAWKHPRAFHPLSK 175

Query: 359 ---------DSVL------IDTKNILFICGGAFVNLEKIISERKQDSSIGFGVPVRANMR 403
                    D ++      IDTKNILFICGGAF+NLEK ISER+QDSSIGFG PVR+NMR
Sbjct: 176 YLSMSVTFNDQLITYSPSAIDTKNILFICGGAFINLEKTISERRQDSSIGFGAPVRSNMR 235

Query: 404 ACGLPDAAVTSSLLENVESGDLIAYGLIPEFVGRFPILAGLSALSEDQLLQVLIEPKNAL 463
           A G+ +AAVTSSLLE+VES DLIAYGLIP+          LSAL+EDQL+QVLIEPKNAL
Sbjct: 236 AGGITNAAVTSSLLESVESADLIAYGLIPD----------LSALTEDQLMQVLIEPKNAL 285

Query: 464 VKQYKKMFRMNDVNLHFTDNALRLIAKKAMAKNTGARGLRALLENILTEAMFEVPD-KAD 522
            KQYKK+F  N+V LHFT+ A RLIAKKAMAK TGARGLRALLE+ILTEAM+E+PD KA 
Sbjct: 286 AKQYKKLFNTNNVKLHFTEKAHRLIAKKAMAKKTGARGLRALLESILTEAMYEIPDVKAG 345

Query: 523 IGNIEGVLVDEEAVGSLNGHGCGAKILYRDNNGSLE 558
              I+ V+VDEE+VGS+N  GCG KIL  D  G+LE
Sbjct: 346 DELIDAVVVDEESVGSVNAPGCGGKILCGD--GALE 379


>Glyma07g40220.1 
          Length = 56

 Score = 84.3 bits (207), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 45/63 (71%), Positives = 50/63 (79%), Gaps = 7/63 (11%)

Query: 454 QVLIEPKNALVKQYKKMFRMNDVNLHFTDNALRLIAKKAMAKNTGARGLRALLENILTEA 513
           QVL+EPKNALVKQYKKM+  N+   HFTDNAL LI K     NTGARGLRALLEN+LT+ 
Sbjct: 1   QVLVEPKNALVKQYKKMYVQNE--QHFTDNALSLIVK-----NTGARGLRALLENVLTKV 53

Query: 514 MFE 516
           MFE
Sbjct: 54  MFE 56