Miyakogusa Predicted Gene

Lj0g3v0057569.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0057569.1 Non Chatacterized Hit- tr|I1R080|I1R080_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,45.1,0.000000000000002,seg,NULL; HCP-like,NULL; no
description,NULL; no description,Tetratricopeptide-like
helical,CUFF.2546.1
         (226 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g10980.1                                                       310   1e-84
Glyma05g28010.1                                                       307   7e-84
Glyma18g00990.2                                                       283   1e-76
Glyma18g00990.1                                                       283   1e-76
Glyma11g37070.1                                                       278   2e-75
Glyma04g37220.1                                                       246   2e-65
Glyma06g17840.1                                                       241   4e-64
Glyma04g36690.1                                                        55   4e-08

>Glyma08g10980.1 
          Length = 391

 Score =  310 bits (793), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 164/236 (69%), Positives = 183/236 (77%), Gaps = 10/236 (4%)

Query: 1   MRTRRGPCYP---QNMCSDVGFPKRKN-DLHTHMQ---KDSIL-TRKRQKKSPA--ATSG 50
           MRTRRG CYP     MCS+V   K+K+ DLH HM     DSI+ +RK+QKK+P   A   
Sbjct: 1   MRTRRGACYPGVVSRMCSNVRVTKKKSKDLHMHMHVPAGDSIIYSRKKQKKTPEKLAAGR 60

Query: 51  DDHFESLPDDLVIXXXXXXXXXXXXXXXXXXVLITCKRLNSLGLNSLVLAKASSRIFSIR 110
            D FESLPDDLVI                  VLIT KRLN L L+SLVL+KAS R F+I+
Sbjct: 61  YDFFESLPDDLVISIFCKLSSTATKPSDFVNVLITSKRLNRLALHSLVLSKASPRTFTIK 120

Query: 111 AKDWSESAHRFLKQCADAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAISSHARALYSL 170
           AK W +SAH+FLK CADAGN+EACYTLGMIRFYCLQNRGSGASLMAKAAI+SHARALY+L
Sbjct: 121 AKYWCDSAHKFLKHCADAGNIEACYTLGMIRFYCLQNRGSGASLMAKAAINSHARALYAL 180

Query: 171 AVIQFNGSGGTKSDKDLRAGVALCARAAFLGHIDALREIGHCLQDGYGCRKNIIEG 226
           AVIQFNGSGGTKSDKDLRAGVALCARAAFLGH+DALRE+GHCLQDGYG R+NI EG
Sbjct: 181 AVIQFNGSGGTKSDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNIAEG 236


>Glyma05g28010.1 
          Length = 436

 Score =  307 bits (786), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 164/240 (68%), Positives = 185/240 (77%), Gaps = 14/240 (5%)

Query: 1   MRTRRGPCYP---QNMCSDVGFPKRKN-DLHTHMQK-------DSIL-TRKRQKKSPAAT 48
           MRTRRG CY      MCSD    K+KN DLH HM         DSI+ +RKRQKK+P  T
Sbjct: 43  MRTRRGACYSGVVSRMCSDARVSKKKNKDLHMHMHMHMHVPAGDSIIYSRKRQKKTPEKT 102

Query: 49  SGDDH--FESLPDDLVIXXXXXXXXXXXXXXXXXXVLITCKRLNSLGLNSLVLAKASSRI 106
           +G D+  FESLPDDLVI                  +LITCKRLN L L+SLVL+KAS + 
Sbjct: 103 AGADYEFFESLPDDLVISIFCKLSSTATKPSDFVNILITCKRLNRLALHSLVLSKASPKT 162

Query: 107 FSIRAKDWSESAHRFLKQCADAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAISSHARA 166
           F+I+A+DW +SAH+FLK CADAGNVEACYTLGMIRFYCLQNRGSGAS MAKAAI+SHARA
Sbjct: 163 FTIKARDWCDSAHKFLKHCADAGNVEACYTLGMIRFYCLQNRGSGASFMAKAAINSHARA 222

Query: 167 LYSLAVIQFNGSGGTKSDKDLRAGVALCARAAFLGHIDALREIGHCLQDGYGCRKNIIEG 226
           LY+LAVIQFNGSGGTKSDKDLRAGVALCARAAFLGH+DA+RE+GHCLQDGYG R+NI EG
Sbjct: 223 LYALAVIQFNGSGGTKSDKDLRAGVALCARAAFLGHVDAMRELGHCLQDGYGVRQNIAEG 282


>Glyma18g00990.2 
          Length = 348

 Score =  283 bits (724), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 141/189 (74%), Positives = 157/189 (83%), Gaps = 1/189 (0%)

Query: 38  RKRQKKSPAATSGDDHFESLPDDLVIXXXXXXXXXXXXXXXXXXVLITCKRLNSLGLNSL 97
           RKRQK SP  TS DD F+SLPDDLV+                  VLITCKRLNSLGL+SL
Sbjct: 4   RKRQKTSPDKTS-DDFFDSLPDDLVLSILCKLSSTATSPSDFISVLITCKRLNSLGLHSL 62

Query: 98  VLAKASSRIFSIRAKDWSESAHRFLKQCADAGNVEACYTLGMIRFYCLQNRGSGASLMAK 157
           VL+KAS + FS++AK+W +S HRFLK CADAGN+EACYTLGMIRFYCLQNRGSGASLMAK
Sbjct: 63  VLSKASHKTFSVKAKNWCDSLHRFLKHCADAGNIEACYTLGMIRFYCLQNRGSGASLMAK 122

Query: 158 AAISSHARALYSLAVIQFNGSGGTKSDKDLRAGVALCARAAFLGHIDALREIGHCLQDGY 217
           AA++SHA ALYSLAVIQFNGSGGTK+DKDLRAGVALCARAAFLGHIDALRE+GHCLQDGY
Sbjct: 123 AAMNSHAPALYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGY 182

Query: 218 GCRKNIIEG 226
           G + N+ EG
Sbjct: 183 GVKLNVTEG 191


>Glyma18g00990.1 
          Length = 348

 Score =  283 bits (724), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 141/189 (74%), Positives = 157/189 (83%), Gaps = 1/189 (0%)

Query: 38  RKRQKKSPAATSGDDHFESLPDDLVIXXXXXXXXXXXXXXXXXXVLITCKRLNSLGLNSL 97
           RKRQK SP  TS DD F+SLPDDLV+                  VLITCKRLNSLGL+SL
Sbjct: 4   RKRQKTSPDKTS-DDFFDSLPDDLVLSILCKLSSTATSPSDFISVLITCKRLNSLGLHSL 62

Query: 98  VLAKASSRIFSIRAKDWSESAHRFLKQCADAGNVEACYTLGMIRFYCLQNRGSGASLMAK 157
           VL+KAS + FS++AK+W +S HRFLK CADAGN+EACYTLGMIRFYCLQNRGSGASLMAK
Sbjct: 63  VLSKASHKTFSVKAKNWCDSLHRFLKHCADAGNIEACYTLGMIRFYCLQNRGSGASLMAK 122

Query: 158 AAISSHARALYSLAVIQFNGSGGTKSDKDLRAGVALCARAAFLGHIDALREIGHCLQDGY 217
           AA++SHA ALYSLAVIQFNGSGGTK+DKDLRAGVALCARAAFLGHIDALRE+GHCLQDGY
Sbjct: 123 AAMNSHAPALYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGY 182

Query: 218 GCRKNIIEG 226
           G + N+ EG
Sbjct: 183 GVKLNVTEG 191


>Glyma11g37070.1 
          Length = 362

 Score =  278 bits (712), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 138/189 (73%), Positives = 157/189 (83%), Gaps = 2/189 (1%)

Query: 38  RKRQKKSPAATSGDDHFESLPDDLVIXXXXXXXXXXXXXXXXXXVLITCKRLNSLGLNSL 97
           RKRQK SP  TS  D F+SLPDDLV+                  VLITCKRLNSLGL+SL
Sbjct: 16  RKRQKTSPDKTS--DCFDSLPDDLVLSILCKLSSTATSPSDFISVLITCKRLNSLGLHSL 73

Query: 98  VLAKASSRIFSIRAKDWSESAHRFLKQCADAGNVEACYTLGMIRFYCLQNRGSGASLMAK 157
           VL+KAS + FS++AK+W +S HRFLK CADAGN+EACYTLG+IRFYCLQNRGSGA+LMAK
Sbjct: 74  VLSKASHKTFSVKAKNWCDSLHRFLKHCADAGNIEACYTLGLIRFYCLQNRGSGAALMAK 133

Query: 158 AAISSHARALYSLAVIQFNGSGGTKSDKDLRAGVALCARAAFLGHIDALREIGHCLQDGY 217
           AA++SHA ALYSLAVIQFNGSGGTK+DKDLRAGVALCARAAFLGHIDALRE+GHCLQDGY
Sbjct: 134 AAMNSHAPALYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGY 193

Query: 218 GCRKNIIEG 226
           G ++N+ EG
Sbjct: 194 GVKQNVTEG 202


>Glyma04g37220.1 
          Length = 344

 Score =  246 bits (627), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 118/175 (67%), Positives = 140/175 (80%)

Query: 52  DHFESLPDDLVIXXXXXXXXXXXXXXXXXXVLITCKRLNSLGLNSLVLAKASSRIFSIRA 111
           D FE LPDDL++                  +++TCKRLN LGL+ LVL+KA+S++F+I+ 
Sbjct: 13  DLFECLPDDLLVLILSKLSSTASSPSDFINIILTCKRLNRLGLHRLVLSKAASKLFAIKP 72

Query: 112 KDWSESAHRFLKQCADAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAISSHARALYSLA 171
           K+WSE AH FLK CA+AGNV+ACYTLGMIRFYCL+NRGSG SLMAKAA+  HA ALYSLA
Sbjct: 73  KNWSEYAHSFLKHCANAGNVDACYTLGMIRFYCLKNRGSGLSLMAKAAMKLHAPALYSLA 132

Query: 172 VIQFNGSGGTKSDKDLRAGVALCARAAFLGHIDALREIGHCLQDGYGCRKNIIEG 226
           VIQFNGSGG+K DKDLRAGVAL ARA+ LGHIDALRE+GHCLQDGYG R+N+ EG
Sbjct: 133 VIQFNGSGGSKRDKDLRAGVALSARASLLGHIDALRELGHCLQDGYGVRQNVTEG 187


>Glyma06g17840.1 
          Length = 340

 Score =  241 bits (616), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 116/175 (66%), Positives = 136/175 (77%)

Query: 52  DHFESLPDDLVIXXXXXXXXXXXXXXXXXXVLITCKRLNSLGLNSLVLAKASSRIFSIRA 111
           D FE LPDDLV+                  +++TCKRLN  GL+ LVL+KA  ++F+I+ 
Sbjct: 13  DLFECLPDDLVVLILSKLSATASSPSDFINIILTCKRLNRSGLHRLVLSKAGPKVFAIKP 72

Query: 112 KDWSESAHRFLKQCADAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAISSHARALYSLA 171
           K+WSE AH FLK C +AGNV+ACYTLGMIRFYCL+NRGSG SLMAKAA+  HA ALYSLA
Sbjct: 73  KNWSEYAHSFLKHCVNAGNVDACYTLGMIRFYCLKNRGSGLSLMAKAAMKLHAPALYSLA 132

Query: 172 VIQFNGSGGTKSDKDLRAGVALCARAAFLGHIDALREIGHCLQDGYGCRKNIIEG 226
           VIQFNGSGG+K DKDLRAGVAL ARA+ LGHIDALRE+GHCLQDGYG R+N+ EG
Sbjct: 133 VIQFNGSGGSKRDKDLRAGVALSARASLLGHIDALRELGHCLQDGYGVRQNVTEG 187


>Glyma04g36690.1 
          Length = 45

 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 27/44 (61%), Positives = 34/44 (77%)

Query: 87  KRLNSLGLNSLVLAKASSRIFSIRAKDWSESAHRFLKQCADAGN 130
           KRLN L L+ LVL+KAS +  + RA+DW + A+RFLK CADAGN
Sbjct: 2   KRLNRLALHLLVLSKASLKTSATRAEDWCDFAYRFLKNCADAGN 45