Miyakogusa Predicted Gene

Lj0g3v0057319.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0057319.1 Non Chatacterized Hit- tr|B9RF70|B9RF70_RICCO
Always early, putative OS=Ricinus communis
GN=RCOM_143,55.43,4e-17,SANT,SANT domain; LIN-9-RELATED,NULL;
LIN-9,NULL; seg,NULL; Homeodomain-like,Homeodomain-like; no
de,CUFF.2507.1
         (90 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g29480.2                                                       135   1e-32
Glyma10g29480.1                                                       135   1e-32
Glyma20g37820.1                                                       133   4e-32
Glyma17g02740.1                                                       102   9e-23
Glyma07g37960.1                                                        98   2e-21
Glyma03g16220.1                                                        47   6e-06

>Glyma10g29480.2 
          Length = 1124

 Score =  135 bits (340), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 65/89 (73%), Positives = 73/89 (82%)

Query: 1  MAPTKKSRSVNKRLSNSNDLSPEKDGVNSNXXXXXXXXXXXXXGSQWSKEELQRFYEAYR 60
          MAPT+KSRSVNKR+S+SND SPEKDGVNSN             GSQWSKEEL+RFYEAYR
Sbjct: 1  MAPTRKSRSVNKRMSSSNDNSPEKDGVNSNKSKQRKRKLTDKLGSQWSKEELERFYEAYR 60

Query: 61 KYGKEWKKVASAVRNRSIEMVEALYNLNR 89
          KYGK+WKKVA+ VRNRS EMVEALY++NR
Sbjct: 61 KYGKDWKKVAAVVRNRSTEMVEALYSMNR 89


>Glyma10g29480.1 
          Length = 1135

 Score =  135 bits (340), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 65/89 (73%), Positives = 73/89 (82%)

Query: 1  MAPTKKSRSVNKRLSNSNDLSPEKDGVNSNXXXXXXXXXXXXXGSQWSKEELQRFYEAYR 60
          MAPT+KSRSVNKR+S+SND SPEKDGVNSN             GSQWSKEEL+RFYEAYR
Sbjct: 1  MAPTRKSRSVNKRMSSSNDNSPEKDGVNSNKSKQRKRKLTDKLGSQWSKEELERFYEAYR 60

Query: 61 KYGKEWKKVASAVRNRSIEMVEALYNLNR 89
          KYGK+WKKVA+ VRNRS EMVEALY++NR
Sbjct: 61 KYGKDWKKVAAVVRNRSTEMVEALYSMNR 89


>Glyma20g37820.1 
          Length = 1154

 Score =  133 bits (335), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 64/89 (71%), Positives = 73/89 (82%)

Query: 1  MAPTKKSRSVNKRLSNSNDLSPEKDGVNSNXXXXXXXXXXXXXGSQWSKEELQRFYEAYR 60
          MAPT+KSRSVNKR+S+SND SPEKDG+NSN             GSQWSKEEL+RFYEAYR
Sbjct: 1  MAPTRKSRSVNKRMSSSNDNSPEKDGINSNKNKLRKKKLTDKLGSQWSKEELERFYEAYR 60

Query: 61 KYGKEWKKVASAVRNRSIEMVEALYNLNR 89
          KYGK+WKKVA+ +RNRS EMVEALYN+NR
Sbjct: 61 KYGKDWKKVAAFIRNRSTEMVEALYNMNR 89


>Glyma17g02740.1 
          Length = 781

 Score =  102 bits (254), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 51/92 (55%), Positives = 63/92 (68%), Gaps = 2/92 (2%)

Query: 1  MAPTKKSRSVNKRLSNSNDLSPEKDGV--NSNXXXXXXXXXXXXXGSQWSKEELQRFYEA 58
          MAP++KSRSVNKR S   + +  KD +  N++             G QW+KEEL+ FYEA
Sbjct: 1  MAPSRKSRSVNKRFSTVREAASSKDKITENASKNRLKKRKLADMLGPQWNKEELEHFYEA 60

Query: 59 YRKYGKEWKKVASAVRNRSIEMVEALYNLNRV 90
          YRKYGK+WKKVA AV NRS+EMVEALY +NR 
Sbjct: 61 YRKYGKDWKKVALAVHNRSVEMVEALYTMNRA 92


>Glyma07g37960.1 
          Length = 1121

 Score = 97.8 bits (242), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 49/98 (50%), Positives = 61/98 (62%), Gaps = 9/98 (9%)

Query: 1  MAPTKKSRSVNKRLSNSNDLSPEKDGVNSNXXXXXXXXX---------XXXXGSQWSKEE 51
          MAP++KSRSVNKR S   + +  KD +  N                      G QW+KEE
Sbjct: 1  MAPSRKSRSVNKRFSTVREAASSKDKIAENASKNRLKASPGIQKKRKLADMLGPQWNKEE 60

Query: 52 LQRFYEAYRKYGKEWKKVASAVRNRSIEMVEALYNLNR 89
          L+ FYEAYRKYG++WKKV  A+RNRS+EMVEALY +NR
Sbjct: 61 LEHFYEAYRKYGRDWKKVVLAIRNRSVEMVEALYTMNR 98


>Glyma03g16220.1 
          Length = 28

 Score = 46.6 bits (109), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 19/25 (76%), Positives = 23/25 (92%)

Query: 44 GSQWSKEELQRFYEAYRKYGKEWKK 68
          G QW+K+EL+ FYEAYRKYGK+WKK
Sbjct: 4  GPQWNKDELEHFYEAYRKYGKDWKK 28