Miyakogusa Predicted Gene

Lj0g3v0057259.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0057259.1 tr|A9RC35|A9RC35_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_64386
,38.03,0.0000000000005,ACETYLTRANSFERASE-RELATED,NULL;
seg,NULL,FS325281.path2.1
         (191 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g02160.1                                                       254   6e-68
Glyma07g08810.1                                                       246   1e-65
Glyma06g03680.1                                                        50   2e-06
Glyma06g03680.2                                                        50   2e-06
Glyma06g03680.3                                                        49   2e-06

>Glyma03g02160.1 
          Length = 283

 Score =  254 bits (648), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 118/161 (73%), Positives = 140/161 (86%), Gaps = 3/161 (1%)

Query: 34  NPFRAVGCDAEE---LTVPPAITVDPFRNDKARIKGVYDWVRTLVCVPLMLARLVLFGLC 90
           NPFR +G D ++   L+VPP  T+DPFRN    I+G+Y+W +T++C+PL   RL +FGLC
Sbjct: 1   NPFRVLGTDDDDDDDLSVPPPSTLDPFRNRTPAIEGLYEWAKTVLCLPLAALRLAIFGLC 60

Query: 91  LAVGFVATKLALYGWKDKENPMPVWRCRVMWVTRICARCILFAFGYQWIKRKGRPAPRGI 150
           LA+G+VATK+AL GWKDKENPMP WRCRVMW+TR+CARCILF+FGYQWIKRKG+PAPR I
Sbjct: 61  LALGYVATKVALQGWKDKENPMPKWRCRVMWITRLCARCILFSFGYQWIKRKGKPAPREI 120

Query: 151 APIIVSNHVSYIEPIFYFYELFATIVASESHDSLPFVGTII 191
           APIIVSNHVSYIEPIFYFYELF TIVA+ESHDS+PFVGTII
Sbjct: 121 APIIVSNHVSYIEPIFYFYELFPTIVAAESHDSIPFVGTII 161


>Glyma07g08810.1 
          Length = 526

 Score =  246 bits (627), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 123/176 (69%), Positives = 145/176 (82%), Gaps = 2/176 (1%)

Query: 16  HLIITVESDXXXXXXXXXNPFRAVGCDAEELTVPPAITVDPFRNDKARIKGVYDWVRTLV 75
           H+++TV            NPF A+GCD ++ +VPP  T+DPFRN    I+G+Y+W +T +
Sbjct: 16  HIVVTVHPSAAPSATG--NPFIALGCDDDDFSVPPPSTLDPFRNRTPAIEGLYEWAKTAL 73

Query: 76  CVPLMLARLVLFGLCLAVGFVATKLALYGWKDKENPMPVWRCRVMWVTRICARCILFAFG 135
           C+PL   RL LFGLCLAVG+VATK+AL GWKDKENPMP WRCRVMW+TR+CARCILF+FG
Sbjct: 74  CLPLAALRLALFGLCLAVGYVATKVALAGWKDKENPMPKWRCRVMWITRLCARCILFSFG 133

Query: 136 YQWIKRKGRPAPRGIAPIIVSNHVSYIEPIFYFYELFATIVASESHDSLPFVGTII 191
           YQWIKRKG+PAPR IAPIIVSNHVSYIEPIFYFYELF TIVA+ESHDS+PFVGTII
Sbjct: 134 YQWIKRKGKPAPREIAPIIVSNHVSYIEPIFYFYELFPTIVAAESHDSIPFVGTII 189


>Glyma06g03680.1 
          Length = 378

 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 8/83 (9%)

Query: 116 RCRVMWVTRICARCILFAFGYQWI--------KRKGRPAPRGIAPIIVSNHVSYIEPIFY 167
           R  ++   R  +R +LF FG+ WI        + + +P   G   +I+SNHVSY++ +++
Sbjct: 124 RTVIVSCGRALSRVMLFIFGFYWIPESNSASQEDRSQPEELGRPSVIISNHVSYLDILYH 183

Query: 168 FYELFATIVASESHDSLPFVGTI 190
               F + VA  S   LP +G I
Sbjct: 184 MSSSFPSFVAKRSVAKLPLIGLI 206


>Glyma06g03680.2 
          Length = 370

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 8/83 (9%)

Query: 116 RCRVMWVTRICARCILFAFGYQWI--------KRKGRPAPRGIAPIIVSNHVSYIEPIFY 167
           R  ++   R  +R +LF FG+ WI        + + +P   G   +I+SNHVSY++ +++
Sbjct: 124 RTVIVSCGRALSRVMLFIFGFYWIPESNSASQEDRSQPEELGRPSVIISNHVSYLDILYH 183

Query: 168 FYELFATIVASESHDSLPFVGTI 190
               F + VA  S   LP +G I
Sbjct: 184 MSSSFPSFVAKRSVAKLPLIGLI 206


>Glyma06g03680.3 
          Length = 362

 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 8/83 (9%)

Query: 116 RCRVMWVTRICARCILFAFGYQWI--------KRKGRPAPRGIAPIIVSNHVSYIEPIFY 167
           R  ++   R  +R +LF FG+ WI        + + +P   G   +I+SNHVSY++ +++
Sbjct: 124 RTVIVSCGRALSRVMLFIFGFYWIPESNSASQEDRSQPEELGRPSVIISNHVSYLDILYH 183

Query: 168 FYELFATIVASESHDSLPFVGTI 190
               F + VA  S   LP +G I
Sbjct: 184 MSSSFPSFVAKRSVAKLPLIGLI 206