Miyakogusa Predicted Gene

Lj0g3v0057179.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0057179.1 tr|G7ZYM9|G7ZYM9_MEDTR FBD-associated F-box
protein OS=Medicago truncatula GN=MTR_076s0012 PE=4
SV=1,38.3,2e-19,domain in FBox and BRCT domain containing pl,FBD;
FAMILY NOT NAMED,NULL; FBD,FBD,CUFF.2502.1
         (141 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g46590.2                                                       118   2e-27
Glyma08g46320.1                                                       102   1e-22
Glyma18g35320.1                                                        92   1e-19
Glyma17g05620.1                                                        87   4e-18
Glyma18g35360.1                                                        85   2e-17
Glyma18g35330.1                                                        84   3e-17
Glyma18g35370.1                                                        72   2e-13
Glyma08g46590.1                                                        70   1e-12
Glyma13g40060.1                                                        50   6e-07

>Glyma08g46590.2 
          Length = 380

 Score =  118 bits (296), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 60/139 (43%), Positives = 78/139 (56%), Gaps = 1/139 (0%)

Query: 3   HCNSFPMFHNLIHLQLVYQRYNAHWSQVLELLHHCPKLQLLAINQPDIHSFHFEQIQKGE 62
             N  P F NL HL+L Y      W  VLE++  CP LQ+L I+   I     +  +  +
Sbjct: 240 EANLIPEFQNLTHLELGYSECTRDWVDVLEVIQRCPNLQILDIDMGSIDMTTRDD-EGAD 298

Query: 63  WQLPPSVPQCLLLHLKRCYLNHYRGTKPEFEFARYSMHNGRFLKSMTISTGIAKNPKFKM 122
           W  P SVP  + LHLK C++  Y G+K E  FARY M N R L++M IST  ++  KF M
Sbjct: 299 WPFPRSVPSSISLHLKTCFIRCYGGSKGELRFARYIMRNARHLRTMKISTYASRQQKFNM 358

Query: 123 LKELSSCKRGSATCRLCFK 141
           LK+LS C R S  C+L FK
Sbjct: 359 LKKLSLCPRRSRICKLSFK 377


>Glyma08g46320.1 
          Length = 379

 Score =  102 bits (254), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 53/142 (37%), Positives = 80/142 (56%), Gaps = 14/142 (9%)

Query: 7   FPMFHNLIHLQLVYQRYNAHWSQVLELLHHCPKLQLLAINQPDIHSFHFEQIQKGEWQLP 66
           FP+FHNLIHL++ +  +   W+ V E++ HCPKLQ   +  P       E      W  P
Sbjct: 244 FPVFHNLIHLEVSFW-FVVRWNLVFEMIKHCPKLQTFVLFLP------LESFPPMVWTFP 296

Query: 67  PSVPQCLLLHLKRCYLNHYRGTKPEFEFARYSMHNGRFLKSMTISTGIAKN-------PK 119
             VP+C+   L+RC + +Y+G K E +FA+Y + N R L+SMTI     +N        K
Sbjct: 297 QIVPECISSKLRRCTIMNYKGKKYELQFAKYILQNSRALQSMTIHNKRVRNTYFANPQDK 356

Query: 120 FKMLKELSSCKRGSATCRLCFK 141
            ++L+EL+ C + S TC++ FK
Sbjct: 357 IRILQELAMCPKSSTTCKILFK 378


>Glyma18g35320.1 
          Length = 345

 Score = 92.4 bits (228), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/134 (41%), Positives = 72/134 (53%), Gaps = 12/134 (8%)

Query: 10  FHNLIHLQLVYQRYNAHWSQVLELLHHCPKLQLLAINQPDIHSFHFEQIQKGEWQLPPSV 69
           F NL HL+    R       VL+L+  CPKLQ+L I + D   F        E   P SV
Sbjct: 222 FQNLTHLEFFSYRGGFF---VLDLIKRCPKLQILTIYKVDSALF-------AEGDYPQSV 271

Query: 70  PQCLLLHLKRCYLNHYRGTKPEFEFARYSMHNGRFLKSMTIS--TGIAKNPKFKMLKELS 127
           P C+  HLK C L  Y G+K EF F  Y M N ++L+ MTIS  + I K  K +M ++LS
Sbjct: 272 PICISFHLKICTLKRYNGSKDEFRFVTYIMENSKYLQIMTISCNSDINKERKLEMFQKLS 331

Query: 128 SCKRGSATCRLCFK 141
            C R S +C+L F+
Sbjct: 332 LCTRCSTSCKLLFE 345


>Glyma17g05620.1 
          Length = 158

 Score = 87.4 bits (215), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 49/118 (41%), Positives = 68/118 (57%), Gaps = 7/118 (5%)

Query: 26  HWSQVLELLHHCPKLQLLAINQPDIHSFHFEQIQKGEWQLPPSVPQCLLLHLKRCYLNHY 85
           H  Q L+ L HC +      +  D+ ++  +      W  P S+P C+ LHLK C L +Y
Sbjct: 46  HLDQPLKRLRHCVRSS--RYSPADVKAWLAD---AAYWSYPQSIPTCVSLHLKTCRLTNY 100

Query: 86  RGTKPEFEFARYSMHNGRFLKSMTISTGIAKN--PKFKMLKELSSCKRGSATCRLCFK 141
            G+K EF+FARY M N   L++MTI T  + N   K +M++ LSSC R SATC+L FK
Sbjct: 101 VGSKGEFQFARYIMQNASHLQTMTICTNTSSNEGEKLEMIENLSSCTRCSATCKLLFK 158


>Glyma18g35360.1 
          Length = 357

 Score = 85.1 bits (209), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 54/129 (41%), Positives = 73/129 (56%), Gaps = 9/129 (6%)

Query: 10  FHNLIHLQLVYQRYNAHWSQVLELLHHCPKLQLLAINQPDIHSFHFEQIQKGE-WQLPPS 68
           F NL +L+L+   +  +W  +L+LLH CP LQ+L I++ +     F +    E W     
Sbjct: 200 FVNLTYLELIVDAH--YWDWLLKLLHCCPNLQILVIDKGN----SFNKTSNDENWVYSHL 253

Query: 69  VPQCLLLHLKRCYLNHYRGTKPEFEFARYSMHNGRFLKSMTI-STGIAK-NPKFKMLKEL 126
           VP+CL   LK C    Y G + EF+FARY M N R L + TI STG +    KF+M+K L
Sbjct: 254 VPKCLSSKLKTCRFQKYEGWECEFQFARYIMQNARALCAFTICSTGFSPLAAKFQMIKRL 313

Query: 127 SSCKRGSAT 135
           SSC R S T
Sbjct: 314 SSCPRISIT 322


>Glyma18g35330.1 
          Length = 342

 Score = 84.3 bits (207), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/128 (38%), Positives = 76/128 (59%), Gaps = 9/128 (7%)

Query: 10  FHNLIHLQLVYQ-RYNAHWSQVLELLHHCPKLQLLAINQPDIHSFHFEQIQKGEWQLPPS 68
           F NL H++L+++ R+N    +++ LLH CP LQ+L +++ ++    F +    +   P  
Sbjct: 220 FLNLTHMELIFRFRFNV-LGRLINLLHECPNLQILVVDEGNL----FVK-TSSDVSYPQF 273

Query: 69  VPQCLLLHLKRCYLNHYRGTKPEFEFARYSMHNGRFLKSMTISTGIAKNP--KFKMLKEL 126
           VP+CL   LKRC +  Y G + E  FARY + N R L SMTI +  + N   + +M+K+L
Sbjct: 274 VPKCLSTQLKRCCVKKYGGQESELRFARYVLQNARVLYSMTIYSISSSNSGERLQMIKKL 333

Query: 127 SSCKRGSA 134
           SSC R SA
Sbjct: 334 SSCPRISA 341


>Glyma18g35370.1 
          Length = 409

 Score = 72.0 bits (175), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 10/139 (7%)

Query: 5   NSFPMFHNLIHLQLVYQRYNAHWSQVLELLHHCPKLQLLAI-NQPDIHSFHFEQIQKGEW 63
           +  P+F  LI L++ +  Y+  W  +  LL    KL++L I  +P      + + Q+  W
Sbjct: 277 SDIPVFDKLIQLEISFGNYS--WDLLASLLQRSHKLEVLTIYKEPQ----KYAKGQEPRW 330

Query: 64  QLPPSVPQCLLLHLKRCYLNHYRGTKPEFEFARYSMHNGRFLKSMT--ISTGIAKNPKFK 121
             P  VP+CLL HLK   L  Y+G + E +F  Y M N R L++MT  IS+ +    K +
Sbjct: 331 IHPLLVPECLL-HLKTFCLREYQGLETELDFVGYIMQNARVLETMTIYISSSLGSEEKLQ 389

Query: 122 MLKELSSCKRGSATCRLCF 140
           + + LS  +R   TC++ F
Sbjct: 390 IRRHLSILQRNFETCQIVF 408


>Glyma08g46590.1 
          Length = 515

 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 1/87 (1%)

Query: 3   HCNSFPMFHNLIHLQLVYQRYNAHWSQVLELLHHCPKLQLLAINQPDIHSFHFEQIQKGE 62
             N  P F NL HL+L Y      W  VLE++  CP LQ+L I+   I     +  +  +
Sbjct: 418 EANLIPEFQNLTHLELGYSECTRDWVDVLEVIQRCPNLQILDIDMGSIDMTTRDD-EGAD 476

Query: 63  WQLPPSVPQCLLLHLKRCYLNHYRGTK 89
           W  P SVP  + LHLK C++  Y G+K
Sbjct: 477 WPFPRSVPSSISLHLKTCFIRCYGGSK 503


>Glyma13g40060.1 
          Length = 146

 Score = 50.4 bits (119), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 22/41 (53%), Positives = 28/41 (68%)

Query: 59 QKGEWQLPPSVPQCLLLHLKRCYLNHYRGTKPEFEFARYSM 99
           + EWQ P  VP+C+  HLK C +N+Y G + EFEFARY M
Sbjct: 8  DRREWQYPLYVPKCIPSHLKTCRINNYGGHETEFEFARYIM 48