Miyakogusa Predicted Gene
- Lj0g3v0056979.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0056979.1 Non Chatacterized Hit- tr|K4C8J1|K4C8J1_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,58.33,4e-17,DLC,Dynein light chain, type 1/2; seg,NULL; no
description,Dynein light chain, type 1/2; Dynein_ligh,gene.g4012.t1.1
(264 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma13g23750.1 219 2e-57
Glyma17g12490.1 165 5e-41
Glyma17g10320.1 80 2e-15
Glyma05g01580.1 80 3e-15
Glyma05g34910.1 66 4e-11
Glyma08g04800.1 65 5e-11
Glyma02g07720.1 62 8e-10
Glyma12g35200.1 55 5e-08
Glyma16g26790.1 55 6e-08
Glyma13g35300.1 51 1e-06
>Glyma13g23750.1
Length = 193
Score = 219 bits (558), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 132/218 (60%), Positives = 146/218 (66%), Gaps = 43/218 (19%)
Query: 1 MYIYKVGIGNGNQRNKELEHAVEKEKKSKSRSWLQRIRNPTRTLNNVEKSGNRNLEVGG- 59
MYIYK G NQR KELEH V ++KKSKSRSWL RI + TR N+ G+R+L++G
Sbjct: 13 MYIYKGG--TVNQRKKELEHGVGQDKKSKSRSWLHRI-SRTRIFND----GHRDLDIGAR 65
Query: 60 ----FVEARKSTSCLELG-LRGGFVEGRKSVSSMIEASSSPAVKGIIVEVGRKSVSSMIE 114
FVEARKS SCLELG GG+VEGRKSVS IE
Sbjct: 66 GEGEFVEARKSMSCLELGSPAGGYVEGRKSVS-------------------------FIE 100
Query: 115 ASSSPAVKGIIVEEGRKSVSHIETKYAAAEKARGGFDEGRKSVSQIETFSSVAAYLQVKV 174
A++SPA G IVEE RKSVSHIE +A A G E RKSVS IET SSV AYLQVKV
Sbjct: 101 AAASPAAIGSIVEERRKSVSHIEKNFAVA-----GMVEARKSVSHIETLSSVIAYLQVKV 155
Query: 175 LVSDMPSFMQVHAFRCARRTHDSQEKFSSKHIAHNIKK 212
LVSDMPSFMQVHAFRCARRT+DS EKFS+KHIAHNIKK
Sbjct: 156 LVSDMPSFMQVHAFRCARRTYDSLEKFSAKHIAHNIKK 193
>Glyma17g12490.1
Length = 176
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 82/104 (78%), Positives = 86/104 (82%), Gaps = 5/104 (4%)
Query: 123 GIIVEEGRKSVSHIETKYAAAEKARGGFDEGRKSVSQIETFSSVAAYLQVKVLVSDMPSF 182
G IVEEGRKSVSHIE +A G E RKSVS IET SSV AYLQVKVLVSDMP+F
Sbjct: 41 GSIVEEGRKSVSHIEKNFAVE-----GMVEARKSVSHIETLSSVIAYLQVKVLVSDMPTF 95
Query: 183 MQVHAFRCARRTHDSQEKFSSKHIAHNIKKEFDKAYGPVWHCIV 226
MQVHAFRCARRT+DS EKFS+K IAHNIKKEFDKAYGPVWHCIV
Sbjct: 96 MQVHAFRCARRTYDSLEKFSAKLIAHNIKKEFDKAYGPVWHCIV 139
>Glyma17g10320.1
Length = 259
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 41/54 (75%)
Query: 173 KVLVSDMPSFMQVHAFRCARRTHDSQEKFSSKHIAHNIKKEFDKAYGPVWHCIV 226
K++ DMP FMQ+HA CAR+ DS EKF+SK +A ++KKEFD YGP WHCIV
Sbjct: 169 KMVSVDMPPFMQIHAVDCARKAIDSMEKFTSKTLALSLKKEFDGVYGPAWHCIV 222
>Glyma05g01580.1
Length = 246
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 41/54 (75%)
Query: 173 KVLVSDMPSFMQVHAFRCARRTHDSQEKFSSKHIAHNIKKEFDKAYGPVWHCIV 226
K++ DMP FMQ+HA CAR+ DS EKF+SK +A ++KKEFD YGP WHCIV
Sbjct: 156 KMVSVDMPPFMQIHAVDCARKAIDSMEKFTSKTLALSLKKEFDGVYGPAWHCIV 209
>Glyma05g34910.1
Length = 133
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 172 VKVLVSDMPSFMQVHAFRCARRTHDSQ--EKFSSKHIAHNIKKEFDKAYGPVWHCIV 226
V+V DMP +Q AFRCAR DS +K SK +A +KKEFD +YGP WHCIV
Sbjct: 39 VRVRACDMPLPLQSRAFRCARDLLDSMPPKKLDSKRLALTLKKEFDSSYGPAWHCIV 95
>Glyma08g04800.1
Length = 133
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 172 VKVLVSDMPSFMQVHAFRCARRTHDSQ--EKFSSKHIAHNIKKEFDKAYGPVWHCIV 226
V+V DMP +Q AFRCAR DS +K SK +A +KKEFD +YGP WHCIV
Sbjct: 39 VRVRACDMPLPLQNRAFRCARDLLDSMPSKKLDSKRLALTLKKEFDTSYGPAWHCIV 95
>Glyma02g07720.1
Length = 133
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 170 LQVKVLVSDMPSFMQVHAFRCARRTHDSQE---KFSSKHIAHNIKKEFDKAYGPVWHCIV 226
L+V V DMP +Q AF+CAR +S K SK +A +KKEFD +YGP WHCIV
Sbjct: 37 LKVDVRACDMPLPLQNRAFQCARLYLESMPPANKLDSKRLALALKKEFDSSYGPAWHCIV 96
>Glyma12g35200.1
Length = 152
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 124 IIVEEGRKSVSHIETKYAAAEKARGGFDEGRKSVSQ-IETFSSVAAYLQVKVLVSDMPSF 182
I +EE ++ I KA + SQ I +S+A V++ SDMPS
Sbjct: 4 ITMEEQQEPTKLIHGSKEKHNKAMHMHTTPNPNPSQTIMRLASLAISSNVRLKSSDMPSH 63
Query: 183 MQVHAFRCARRT----HDSQEKFSSKHIAHNIKKEFDKAYGPVWHCIV 226
MQ HA R R H K S+ IA +KKEFD YG WHC++
Sbjct: 64 MQEHALRHTRSLFPLHHPPSPKPSNTLIARALKKEFDSKYGLAWHCVI 111
>Glyma16g26790.1
Length = 130
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 170 LQVKVLVSDMPSFMQVHAFRCARRTHDSQE---KFSSKHIAHNIKKEFDKAYGPVWHCIV 226
+V V DMP +Q A +CAR +S K +K +A +KKEFD +YGP WHCIV
Sbjct: 34 FKVHVRACDMPLPLQNRALQCARLHLESMPPGNKLDNKRLALALKKEFDSSYGPAWHCIV 93
>Glyma13g35300.1
Length = 142
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 160 IETFSSVAAYLQVKVLVSDMPSFMQVHAFRCARRT----HDSQEKFSSKHIAHNIKKEFD 215
I +S+A V++ S MP MQ HA R R H K S+ IA +KKEFD
Sbjct: 31 IMRLASLAISFNVRLKSSHMPLHMQEHALRHTRSLFLLHHPPSPKPSNTLIARALKKEFD 90
Query: 216 KAYGPVWHCIV 226
YG WHC++
Sbjct: 91 SKYGLAWHCVI 101