Miyakogusa Predicted Gene

Lj0g3v0056329.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0056329.1 Non Chatacterized Hit- tr|D7MG48|D7MG48_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,33.49,9e-19,ssb: single-stranded DNA-binding
protein,Single-strand DNA-binding; SSB,Primosome
PriB/single-strand,NODE_41833_length_825_cov_115.176971.path2.1
         (231 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g16100.1                                                       373   e-103
Glyma02g16100.2                                                       368   e-102
Glyma10g03700.1                                                       368   e-102
Glyma10g03700.3                                                       272   2e-73
Glyma10g03700.2                                                       182   2e-46
Glyma14g08720.1                                                       120   1e-27
Glyma07g15570.1                                                        92   4e-19
Glyma14g08760.1                                                        90   2e-18
Glyma17g36390.1                                                        74   9e-14
Glyma05g14790.1                                                        54   1e-07
Glyma14g21430.1                                                        53   3e-07

>Glyma02g16100.1 
          Length = 284

 Score =  373 bits (957), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 177/233 (75%), Positives = 198/233 (84%), Gaps = 3/233 (1%)

Query: 1   MSTNASYPKPSEIPWQKELCNSVSLIGTVGAPVEIKHFPSGKVASWTRLAVKKNATQTSW 60
           M+T  SYPKPSEIPWQKELCNSV+LIG V APVEIKH PSGKV +WTRL VKK+ATQ+S 
Sbjct: 51  MTTTPSYPKPSEIPWQKELCNSVNLIGNVAAPVEIKHLPSGKVVAWTRLCVKKSATQSSS 110

Query: 61  VNLTFWDELAHVAFQHVQKGHQIHVSGRLVADTVETDEGKQQTYYKVVAQELNFIDRSFS 120
           ++LTFWD+LAHVA QH+QKG+QIHVSGRL+ DTVET+EGK QTYYKVVAQ+LNFI+R+FS
Sbjct: 111 ISLTFWDDLAHVASQHLQKGYQIHVSGRLIIDTVETEEGKTQTYYKVVAQQLNFIERNFS 170

Query: 121 QV-NSQDQDSDFMMSGNGRKAGYAANSTGSVMELWQAFFANPGEWWDNRNKKRNPKAPDF 179
              +SQ Q+ DF M+G GRK   A NSTGSV+E W AFFANPGEWWDNRN KRNPKAPDF
Sbjct: 171 SASSSQGQEFDFAMAGGGRKVSNAVNSTGSVVESWNAFFANPGEWWDNRNNKRNPKAPDF 230

Query: 180 KHKDTGEALWIEGRSTPSWVNSQLEIMDSRMGSFTGQ--RMPVDMVTTDEIFS 230
           KHKDTGEALWIEGR +P WV SQLEI+DSRMGSF GQ  RMPV MV  DEI S
Sbjct: 231 KHKDTGEALWIEGRYSPPWVKSQLEILDSRMGSFAGQNARMPVGMVAADEIVS 283


>Glyma02g16100.2 
          Length = 283

 Score =  368 bits (945), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 177/233 (75%), Positives = 198/233 (84%), Gaps = 4/233 (1%)

Query: 1   MSTNASYPKPSEIPWQKELCNSVSLIGTVGAPVEIKHFPSGKVASWTRLAVKKNATQTSW 60
           M+T  SYPKPSEIPWQKELCNSV+LIG V APVEIKH PSGKV +WTRL VKK+ATQ+S 
Sbjct: 51  MTTTPSYPKPSEIPWQKELCNSVNLIGNVAAPVEIKHLPSGKVVAWTRLCVKKSATQSSS 110

Query: 61  VNLTFWDELAHVAFQHVQKGHQIHVSGRLVADTVETDEGKQQTYYKVVAQELNFIDRSFS 120
           ++LTFWD+LAHVA QH+QKG+QIHVSGRL+ DTVET+EGK QTYYKVVAQ+LNFI+R+FS
Sbjct: 111 ISLTFWDDLAHVASQHLQKGYQIHVSGRLIIDTVETEEGKTQTYYKVVAQQLNFIERNFS 170

Query: 121 QVNS-QDQDSDFMMSGNGRKAGYAANSTGSVMELWQAFFANPGEWWDNRNKKRNPKAPDF 179
             +S Q Q+ DF M+G GRK   A NSTGSV+E W AFFANPGEWWDNRN KRNPKAPDF
Sbjct: 171 SASSSQGQEFDFAMAG-GRKVSNAVNSTGSVVESWNAFFANPGEWWDNRNNKRNPKAPDF 229

Query: 180 KHKDTGEALWIEGRSTPSWVNSQLEIMDSRMGSFTGQ--RMPVDMVTTDEIFS 230
           KHKDTGEALWIEGR +P WV SQLEI+DSRMGSF GQ  RMPV MV  DEI S
Sbjct: 230 KHKDTGEALWIEGRYSPPWVKSQLEILDSRMGSFAGQNARMPVGMVAADEIVS 282


>Glyma10g03700.1 
          Length = 292

 Score =  368 bits (944), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 176/229 (76%), Positives = 196/229 (85%), Gaps = 3/229 (1%)

Query: 5   ASYPKPSEIPWQKELCNSVSLIGTVGAPVEIKHFPSGKVASWTRLAVKKNATQTSWVNLT 64
           +SYPKPSEIPWQKELCNSV+LIG V APVEIK+ PSGKV +WTRL VKK+ATQ+S +NLT
Sbjct: 63  SSYPKPSEIPWQKELCNSVNLIGNVAAPVEIKYLPSGKVVAWTRLYVKKSATQSSPINLT 122

Query: 65  FWDELAHVAFQHVQKGHQIHVSGRLVADTVETDEGKQQTYYKVVAQELNFIDRSFSQV-N 123
           FWD+LAHVA QH+QKGHQIHVSGRL+ DTVET+EGK QTYYKVV Q+LNFI+R+FS V +
Sbjct: 123 FWDDLAHVASQHLQKGHQIHVSGRLITDTVETEEGKSQTYYKVVVQQLNFIERNFSSVSS 182

Query: 124 SQDQDSDFMMSGNGRKAGYAANSTGSVMELWQAFFANPGEWWDNRNKKRNPKAPDFKHKD 183
           SQ Q+ DF M+G+GRK   AANSTGSV+E W AFFANPGEWWDNRN KRNPKAPDFKHKD
Sbjct: 183 SQGQEFDFAMAGSGRKVSNAANSTGSVVETWNAFFANPGEWWDNRNNKRNPKAPDFKHKD 242

Query: 184 TGEALWIEGRSTPSWVNSQLEIMDSRMGSFTGQ--RMPVDMVTTDEIFS 230
           TGEALWIEGR  P WV SQLEI+DSRMGSF  Q  RMPV MV  DEI S
Sbjct: 243 TGEALWIEGRYNPPWVKSQLEILDSRMGSFASQNARMPVGMVAADEIVS 291


>Glyma10g03700.3 
          Length = 239

 Score =  272 bits (695), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 128/168 (76%), Positives = 147/168 (87%), Gaps = 1/168 (0%)

Query: 5   ASYPKPSEIPWQKELCNSVSLIGTVGAPVEIKHFPSGKVASWTRLAVKKNATQTSWVNLT 64
           +SYPKPSEIPWQKELCNSV+LIG V APVEIK+ PSGKV +WTRL VKK+ATQ+S +NLT
Sbjct: 63  SSYPKPSEIPWQKELCNSVNLIGNVAAPVEIKYLPSGKVVAWTRLYVKKSATQSSPINLT 122

Query: 65  FWDELAHVAFQHVQKGHQIHVSGRLVADTVETDEGKQQTYYKVVAQELNFIDRSFSQV-N 123
           FWD+LAHVA QH+QKGHQIHVSGRL+ DTVET+EGK QTYYKVV Q+LNFI+R+FS V +
Sbjct: 123 FWDDLAHVASQHLQKGHQIHVSGRLITDTVETEEGKSQTYYKVVVQQLNFIERNFSSVSS 182

Query: 124 SQDQDSDFMMSGNGRKAGYAANSTGSVMELWQAFFANPGEWWDNRNKK 171
           SQ Q+ DF M+G+GRK   AANSTGSV+E W AFFANPGEWWDNRN K
Sbjct: 183 SQGQEFDFAMAGSGRKVSNAANSTGSVVETWNAFFANPGEWWDNRNNK 230


>Glyma10g03700.2 
          Length = 173

 Score =  182 bits (462), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 84/111 (75%), Positives = 97/111 (87%)

Query: 5   ASYPKPSEIPWQKELCNSVSLIGTVGAPVEIKHFPSGKVASWTRLAVKKNATQTSWVNLT 64
           +SYPKPSEIPWQKELCNSV+LIG V APVEIK+ PSGKV +WTRL VKK+ATQ+S +NLT
Sbjct: 63  SSYPKPSEIPWQKELCNSVNLIGNVAAPVEIKYLPSGKVVAWTRLYVKKSATQSSPINLT 122

Query: 65  FWDELAHVAFQHVQKGHQIHVSGRLVADTVETDEGKQQTYYKVVAQELNFI 115
           FWD+LAHVA QH+QKGHQIHVSGRL+ DTVET+EGK QTYYKV     N++
Sbjct: 123 FWDDLAHVASQHLQKGHQIHVSGRLITDTVETEEGKSQTYYKVFVTAANWL 173


>Glyma14g08720.1 
          Length = 245

 Score =  120 bits (302), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/238 (34%), Positives = 117/238 (49%), Gaps = 20/238 (8%)

Query: 7   YPKPSEIPWQKELCNSVSLIGTVGAPVEIKHFPSGKVASWTRLAV-KKNATQTSWVNLTF 65
           + +P  I W   L N+ S IGTV       +  +GK   +T L V K N + +S+  L  
Sbjct: 11  FQRPPTIRWSPHLENTASFIGTVAREPTRVNSTTGKFGVYTVLKVPKSNQSNSSFFRLLL 70

Query: 66  W--DELAHVAFQHVQKGHQIHVSGRLVADTVETDEGKQQTYYKVVAQELNFIDRSFSQVN 123
              + +A +A +H++    IHV G L + T     G  +  YK+  +E  F+ +S   + 
Sbjct: 71  MMRNNVAKLASEHLKSNDLIHVLGSLGSFTKPDANGILRLNYKLEVKEFEFVAQSSGYLG 130

Query: 124 SQDQDSD--------FMMSGNGRK-----AGYAANSTGSVMELWQAFFANPGEWWDNRNK 170
            +  +S         F +    R+     AG   N     + LWQ FF+NP EWWD R  
Sbjct: 131 DKKLESVEGMFCWLLFFILFFYRQMLVSDAGMHKNQNR--LHLWQVFFSNPNEWWDQRKS 188

Query: 171 KRNPKAPDFKHKDTGEALWIEGRSTPSWVNSQLEIMDSRM-GSFTGQRMPVDMVTTDE 227
           KRNPK PDFKHKDTGEALW+     P WV  QL++ DS++ G   G+R  V     DE
Sbjct: 189 KRNPKQPDFKHKDTGEALWL-SEYDPPWVKRQLQLFDSKIAGGSAGRRSRVTNWVYDE 245


>Glyma07g15570.1 
          Length = 309

 Score = 92.4 bits (228), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 103/204 (50%), Gaps = 12/204 (5%)

Query: 9   KPSEIPWQKELCNSVSLIGTVGAPVEIKHFPSGKVASWTRLAVKKNATQTSW-VNLTFWD 67
           KP++IP+Q +L NSV+LIG V +P++    P+      + +  +++++  S+ + + F  
Sbjct: 25  KPNDIPFQPKLANSVNLIGHVQSPIQFHVSPNDGYVWASTVITRQDSSDLSFSIPVIFEG 84

Query: 68  ELAHVAFQHVQKGHQIHVSGRLVADTVETDEGKQQTYYKVVAQELNFIDRSFSQVN---S 124
           +LAH A  H+     IH++G+L  D+ + +    Q+  +V+ Q LNF+ R + Q N   S
Sbjct: 85  DLAHTAKFHLNLNDCIHIAGKLTTDSPQLEHLHPQSNIQVMVQTLNFVQR-YPQPNTTTS 143

Query: 125 QDQDSDFMMSGNGRKAGYAANSTGSVMELWQAFFANPGEWWDNRNKKRN----PKAPDFK 180
            D                  N   S    W+    NP +W D R  KRN    PK PDFK
Sbjct: 144 IDLKPQPQPQPEHSIPSAKKNPDSSSPSPWRDLLDNPMQWRDFRESKRNGLVKPKHPDFK 203

Query: 181 HKDTGEALWIEGRSTPSWVNSQLE 204
            KD G +LW+ G+    WV  +LE
Sbjct: 204 RKD-GYSLWL-GKDE-KWVLPKLE 224



 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 35/61 (57%), Gaps = 2/61 (3%)

Query: 143 AANSTGSVMELWQAFFANPGEWWDNRNKKRNPKAPDFKHKDTGEALWIEGRSTPSWVNSQ 202
           A +  G   E W     N   WWDNR  KRN KAPDFKHK+TG+ LW++  S   WV  +
Sbjct: 233 AISKKGDGGESWNDLVQNYANWWDNRLNKRNAKAPDFKHKETGKGLWLDSSS--EWVLEK 290

Query: 203 L 203
           L
Sbjct: 291 L 291


>Glyma14g08760.1 
          Length = 133

 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 43/78 (55%), Positives = 51/78 (65%), Gaps = 2/78 (2%)

Query: 151 MELWQAFFANPGEWWDNRNKKRNPKAPDFKHKDTGEALWIEGRSTPSWVNSQLEIMDSRM 210
           + LWQ FF+NP EWWD R  KRNPK PDFKHKDTGEALW+     P WV  QL++ DS++
Sbjct: 57  LHLWQVFFSNPNEWWDQRKSKRNPKQPDFKHKDTGEALWL-SEYDPPWVKRQLQLFDSKI 115

Query: 211 -GSFTGQRMPVDMVTTDE 227
            G   G+R  V     DE
Sbjct: 116 AGGSAGRRSRVTNWVYDE 133


>Glyma17g36390.1 
          Length = 76

 Score = 74.3 bits (181), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 32/55 (58%), Positives = 39/55 (70%), Gaps = 1/55 (1%)

Query: 157 FFANPGEWWDNRNKKRNPKAPDFKHKDTGEALWIEGRSTPSWVNSQLEIMDSRMG 211
           F +NP EWWD R +KRNPK PDFKHKDTGEA W+     P WV  QL++ DS++ 
Sbjct: 12  FSSNPNEWWDQRKRKRNPKQPDFKHKDTGEAQWLR-EYDPPWVKKQLQLFDSKIA 65


>Glyma05g14790.1 
          Length = 274

 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 2/47 (4%)

Query: 157 FFANPGEWWDNRNKKRNPKAPDFKHKDTGEALWIEGRSTPSWVNSQL 203
              N   WWDNR  KRN KAPDFKHK+TG+ LW++  S+  WV  +L
Sbjct: 212 LVQNYANWWDNRLNKRNAKAPDFKHKETGKGLWLD--SSSEWVLEKL 256


>Glyma14g21430.1 
          Length = 180

 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/44 (54%), Positives = 30/44 (68%), Gaps = 2/44 (4%)

Query: 160 NPGEWWDNRNKKRNPKAPDFKHKDTGEALWIEGRSTPSWVNSQL 203
           N   WWDNR  KRN KAPDFKHK+T + LW++  S+  WV  +L
Sbjct: 121 NYANWWDNRLNKRNAKAPDFKHKETSKGLWLD--SSSKWVLEKL 162