Miyakogusa Predicted Gene
- Lj0g3v0056169.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0056169.1 Non Chatacterized Hit- tr|B9RBH6|B9RBH6_RICCO
Ribonucleoside-diphosphate reductase small chain,
puta,85.11,0,Ribonuc_red_sm,Ribonucleotide reductase small subunit;
SUBFAMILY NOT NAMED,NULL; RIBONUCLEOSIDE-DIPH,CUFF.2468.1
(326 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma19g25930.1 556 e-159
Glyma16g06070.1 550 e-157
Glyma03g35330.1 550 e-156
Glyma07g38570.1 478 e-135
Glyma05g22890.1 265 4e-71
Glyma03g18370.1 259 3e-69
Glyma20g03730.1 228 6e-60
Glyma20g03600.1 167 1e-41
Glyma02g30930.1 66 4e-11
Glyma02g25170.1 65 1e-10
Glyma19g22290.1 63 3e-10
Glyma13g27860.1 53 4e-07
Glyma14g27960.1 49 7e-06
>Glyma19g25930.1
Length = 329
Score = 556 bits (1434), Expect = e-159, Method: Compositional matrix adjust.
Identities = 268/329 (81%), Positives = 289/329 (87%), Gaps = 3/329 (0%)
Query: 1 MPVMAEEPLLAPNPDRFCMFPIQYPEIWQMYKKALASFWTAEEVDLSHDLRDWDSLNDGE 60
MP + EEPLLAPNPDRFCMFPIQYP+IW+MYKKA ASFWTAEEVDLS DLR WDSL DGE
Sbjct: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWDSLTDGE 60
Query: 61 RHFITHVLAFFAASDGIVLENLAGRFMKEVQIAEARAFYGFQIAIENIHSEMYSLLLETY 120
RHF+THVLAFFAASDGIVLENLAGRF KE+Q+ EARAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61 RHFVTHVLAFFAASDGIVLENLAGRFTKEIQLPEARAFYGFQIAIENIHSEMYSLLLETY 120
Query: 121 IKDSTEKHRLFHAVETIPCVAKKAEWAMKWIDASDSFAERVVAFACVEGIFFSGSFCAIF 180
IKDS +K+ LF A++TIPCVAKKA+WA++WID+SDSFAER+VAFACVEGIFFSGSFCAIF
Sbjct: 121 IKDSDQKNHLFRAIDTIPCVAKKAQWALRWIDSSDSFAERLVAFACVEGIFFSGSFCAIF 180
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACXXXXXXXXXXXXXRVKGIVRDAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFAC RV+ IVRDAV+IEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRQKLTEERVREIVRDAVDIEREFV 240
Query: 241 CDALPCALLGMNGDQMSQYIEFVADYWLEKLGCGKVYNVVNPFPWMELISLKGKTNFFEK 300
CDALPCAL+GMNGD MSQYIEFVAD L LGCGKVYNV NPF WMELISL+GKTNFFEK
Sbjct: 241 CDALPCALVGMNGDLMSQYIEFVADRLLGALGCGKVYNVQNPFDWMELISLQGKTNFFEK 300
Query: 301 RVGEYQIASVM---NGDGDARVFNMDEEF 326
RVGEYQ ASVM NG+G VF MDE+F
Sbjct: 301 RVGEYQKASVMNSLNGNGGTHVFKMDEDF 329
>Glyma16g06070.1
Length = 330
Score = 550 bits (1417), Expect = e-157, Method: Compositional matrix adjust.
Identities = 265/330 (80%), Positives = 288/330 (87%), Gaps = 4/330 (1%)
Query: 1 MPVMAEEPLLAPNPDRFCMFPIQYPEIWQMYKKALASFWTAEEVDLSHDLRDWDSLNDGE 60
MP + EEPLLAPNPDRFCMFPIQYP+IW+MYKKA ASFWTAEEVDLS DLR WDSL DGE
Sbjct: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWDSLTDGE 60
Query: 61 RHFITHVLAFFAASDGIVLENLAGRFMKEVQIAEARAFYGFQIAIENIHSEMYSLLLETY 120
RHF++HVLAFFAASDGIVLENLAGRF KE+QI EARAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61 RHFVSHVLAFFAASDGIVLENLAGRFTKEIQIPEARAFYGFQIAIENIHSEMYSLLLETY 120
Query: 121 IKDSTEKHRLFHAVETIPCVAKKAEWAMKWIDASDSFAERVVAFACVEGIFFSGSFCAIF 180
IKDS++K LF A++TIPCV KKA+WA++WID+SDSFAER+VAFACVEGIFFSGSFCA+F
Sbjct: 121 IKDSSQKSHLFRAIDTIPCVTKKAQWALRWIDSSDSFAERLVAFACVEGIFFSGSFCAVF 180
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACXXXXXXXXXXXXXRVKGIVRDAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFAC RV+ IV+DAV+IEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRQKLTEERVREIVKDAVDIEREFV 240
Query: 241 CDALPCALLGMNGDQMSQYIEFVADYWLEKLGCGKVYNVVNPFPWMELISLKGKTNFFEK 300
CDALPCAL+GMNGD MSQYIEFVAD L LGCGKVYNV NPF WMELISL+GKTNFFEK
Sbjct: 241 CDALPCALVGMNGDLMSQYIEFVADRLLGALGCGKVYNVQNPFDWMELISLQGKTNFFEK 300
Query: 301 RVGEYQIASVM---NGDGDA-RVFNMDEEF 326
RVGEYQ ASVM NG+G VF MDE+F
Sbjct: 301 RVGEYQKASVMSSLNGNGGGNHVFKMDEDF 330
>Glyma03g35330.1
Length = 329
Score = 550 bits (1416), Expect = e-156, Method: Compositional matrix adjust.
Identities = 264/329 (80%), Positives = 287/329 (87%), Gaps = 3/329 (0%)
Query: 1 MPVMAEEPLLAPNPDRFCMFPIQYPEIWQMYKKALASFWTAEEVDLSHDLRDWDSLNDGE 60
MP + EE LL PNPDRFCMFPIQYP+IW+MYKKA ASFWTAEEVDLS DLR W +L+DGE
Sbjct: 1 MPSIPEERLLTPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWATLSDGE 60
Query: 61 RHFITHVLAFFAASDGIVLENLAGRFMKEVQIAEARAFYGFQIAIENIHSEMYSLLLETY 120
RHFITHVLAFFAASDGIVLENLAGRF KE+Q+ EARAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61 RHFITHVLAFFAASDGIVLENLAGRFTKEIQLPEARAFYGFQIAIENIHSEMYSLLLETY 120
Query: 121 IKDSTEKHRLFHAVETIPCVAKKAEWAMKWIDASDSFAERVVAFACVEGIFFSGSFCAIF 180
IKDSTEK+RLF A+ TIPC+ KKA+WA++WIDAS+SFAER+VAFACVEGIFFSGSFCAIF
Sbjct: 121 IKDSTEKNRLFRAINTIPCITKKAQWALRWIDASESFAERLVAFACVEGIFFSGSFCAIF 180
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACXXXXXXXXXXXXXRVKGIVRDAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFAC RV+ IVRDAVEIEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEERVREIVRDAVEIEREFV 240
Query: 241 CDALPCALLGMNGDQMSQYIEFVADYWLEKLGCGKVYNVVNPFPWMELISLKGKTNFFEK 300
CDALPCAL+GMNG+ MS+YIEFVAD L+ LGCGKVY NPF WMELISL+GKTNFFEK
Sbjct: 241 CDALPCALVGMNGELMSRYIEFVADRLLDALGCGKVYGAQNPFDWMELISLQGKTNFFEK 300
Query: 301 RVGEYQIASVM---NGDGDARVFNMDEEF 326
RVGEYQ ASVM NG+G A VF MDE+F
Sbjct: 301 RVGEYQKASVMSSLNGNGGAHVFKMDEDF 329
>Glyma07g38570.1
Length = 339
Score = 478 bits (1230), Expect = e-135, Method: Compositional matrix adjust.
Identities = 231/324 (71%), Positives = 266/324 (82%), Gaps = 3/324 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPEIWQMYKKALASFWTAEEVDLSHDLRDWDSLNDGERHFIT 65
+EP+L RFCMFPI+Y +IW+MYKKA ASFWTAEEVDLS+D++ W++L+ E+HFIT
Sbjct: 16 QEPILMEQSQRFCMFPIRYKQIWEMYKKAEASFWTAEEVDLSYDVQHWETLSVSEKHFIT 75
Query: 66 HVLAFFAASDGIVLENLAGRFMKEVQIAEARAFYGFQIAIENIHSEMYSLLLETYIKDST 125
HVLAFFAASDGIVLENLA RF+ +VQI EARAFYGFQIA+ENIHSEMYSLLLETYIKDS
Sbjct: 76 HVLAFFAASDGIVLENLAARFLSDVQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSR 135
Query: 126 EKHRLFHAVETIPCVAKKAEWAMKWIDASDSFAERVVAFACVEGIFFSGSFCAIFWLKKR 185
EKH+LF+A+E +PCVA+KAEWA+ WI +S SFAER+VAFACVEGIFFSGSFCAIFWLKKR
Sbjct: 136 EKHKLFNAIENLPCVARKAEWALSWIHSSTSFAERLVAFACVEGIFFSGSFCAIFWLKKR 195
Query: 186 GLMPGLTFSNELISRDEGLHCDFACXXXXXXXXXXXXXRVKGIVRDAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFAC +V +V +AVEIE EFVCDALP
Sbjct: 196 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKPLISDQVHKLVHEAVEIETEFVCDALP 255
Query: 246 CALLGMNGDQMSQYIEFVADYWLEKLGCGKVYNVVNPFPWMELISLKGKTNFFEKRVGEY 305
CAL+GMN MSQYI+FVAD L LG + YNV NPF WME ISL+GK NFFE+RVG+Y
Sbjct: 256 CALIGMNSVLMSQYIKFVADRLLVALGYQRKYNVENPFDWMEFISLQGKANFFERRVGDY 315
Query: 306 QIASVMNGDGDAR---VFNMDEEF 326
Q ASVM+ DA VF +DE+F
Sbjct: 316 QKASVMSSLQDAGKNFVFKLDEDF 339
>Glyma05g22890.1
Length = 191
Score = 265 bits (678), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 135/196 (68%), Positives = 149/196 (76%), Gaps = 7/196 (3%)
Query: 45 DLSHDLRDWDSLNDGERHFITHVLAFFAASDGIVLENLAGRFMKEVQIAEARAFYGFQIA 104
DLS DL W +L+DGERHFITHVLAFFAASDGIVLENL GRF KE+Q+ EARAFYGFQI
Sbjct: 1 DLSQDLCHWATLSDGERHFITHVLAFFAASDGIVLENLVGRFTKEIQLPEARAFYGFQIT 60
Query: 105 IENIHSEMYSLLLETYIKDSTE-KHRLFHAVETIPCVAKKAEWAMKWIDASDSFAERVVA 163
IENI SEM SLLLE+YIKDSTE K+RLF A+ TIPC+ KKA+W ++WIDA +SFAER+VA
Sbjct: 61 IENIQSEMCSLLLESYIKDSTEKKNRLFCAINTIPCITKKAQWDLRWIDALESFAERLVA 120
Query: 164 FACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACXXXXXXXXXXXXX 223
FACVEGIFFS SFC IFWLKKRG T RDEGLHCDF C
Sbjct: 121 FACVEGIFFSKSFCTIFWLKKRGRQSVRT------GRDEGLHCDFVCLLYSLLRKKLSEE 174
Query: 224 RVKGIVRDAVEIEREF 239
V+ IV DAVEIEREF
Sbjct: 175 HVREIVHDAVEIEREF 190
>Glyma03g18370.1
Length = 162
Score = 259 bits (662), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 120/162 (74%), Positives = 140/162 (86%)
Query: 5 AEEPLLAPNPDRFCMFPIQYPEIWQMYKKALASFWTAEEVDLSHDLRDWDSLNDGERHFI 64
EEPLLAPNPDRFCMFPIQ+ +IW+MYKK A+FW EEVDLS DL W +L+DGER FI
Sbjct: 1 TEEPLLAPNPDRFCMFPIQFLQIWEMYKKVKAAFWIMEEVDLSQDLCHWATLSDGERPFI 60
Query: 65 THVLAFFAASDGIVLENLAGRFMKEVQIAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
THVLAFF ASDGIVLENLAGRF KE+Q+ EARAFYGFQI I+NIHSEMY+LLLETYIK S
Sbjct: 61 THVLAFFTASDGIVLENLAGRFTKEIQLPEARAFYGFQITIKNIHSEMYNLLLETYIKYS 120
Query: 125 TEKHRLFHAVETIPCVAKKAEWAMKWIDASDSFAERVVAFAC 166
T+ +RLF A+ TIPC+ KKA+WA++WIDAS+SF E ++AFAC
Sbjct: 121 TKNNRLFRAINTIPCIIKKAQWALRWIDASESFVECLMAFAC 162
>Glyma20g03730.1
Length = 201
Score = 228 bits (582), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 120/205 (58%), Positives = 142/205 (69%), Gaps = 29/205 (14%)
Query: 24 YPEIWQMYKKALASFWTAEEVDLSHDLRDWDSLNDGERHFITHVLAFFAASDGIVLENLA 83
YP ++ + + +EVDLS DLR W L++G+RHFITHVLAFF ASD IVLENL+
Sbjct: 26 YPSLFSLNNQV-------DEVDLSPDLRHWAILSNGKRHFITHVLAFFVASDDIVLENLS 78
Query: 84 GRFMKEVQIAEARAFYGFQIAIENIHSEMYSLLLETYIKDSTEKHRLFHAVETIPCVAKK 143
RF+KE+Q+ EA+AFYGFQIAIENIHSEMYSL LETYIKDST+
Sbjct: 79 SRFIKEIQLPEAQAFYGFQIAIENIHSEMYSLPLETYIKDSTK----------------- 121
Query: 144 AEWAMKWIDASDSFAERVVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEG 203
K I+AS+SFAE ++AFAC++GIFFS SFCAIFWLKK GLM GLTFSNELISRDEG
Sbjct: 122 -----KIINASESFAECLMAFACIKGIFFSRSFCAIFWLKKHGLMLGLTFSNELISRDEG 176
Query: 204 LHCDFACXXXXXXXXXXXXXRVKGI 228
LHC+F C RV+ I
Sbjct: 177 LHCNFVCLLYLLLRKKLSEGRVREI 201
>Glyma20g03600.1
Length = 206
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/217 (47%), Positives = 117/217 (53%), Gaps = 31/217 (14%)
Query: 43 EVDLSHDLRDWDSLNDGERHFITHVLAFFAASDGIVLENLAGRFMKEVQIAEARAFYGFQ 102
EVDLS DLR W +L+DG+RHFITHVL FFAASD IVLENL RF KE+Q+ EARAFYGFQ
Sbjct: 1 EVDLSSDLRHWATLSDGKRHFITHVLTFFAASDDIVLENLGSRFTKEIQLLEARAFYGFQ 60
Query: 103 IAIENIHSEMYSLLLETYIKDSTEKHRLFHAVETIPCVAKKAEWAMKWIDASDSFAERVV 162
IAIENIHSEMYSL LETY KDST+K F + + + + W S A +
Sbjct: 61 IAIENIHSEMYSLFLETYTKDSTKKIVCFPSGPSSRSTPQNPSQSASW----HSLASKEY 116
Query: 163 AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACXXXXXXXXXXXX 222
+ +F S DEGLH DFAC
Sbjct: 117 SSPEASARYFGSR-----------------------SADEGLHYDFACLLYLLLRKKLSE 153
Query: 223 XRVKGIVRDAVEIEREFVCDAL----PCALLGMNGDQ 255
RVK IV DAVEIEREF AL ALL G+
Sbjct: 154 GRVKEIVCDAVEIEREFNAMALLGFFLSALLNAKGNH 190
>Glyma02g30930.1
Length = 115
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 40/68 (58%), Gaps = 10/68 (14%)
Query: 32 KKALASFWTAEEVDLSHDLRDWDSLNDGERHFITHVLAFFAASDGIVLENLAGRFMKEVQ 91
KK A FW A+E DSL DGE H +T VLAFF ASD IVLENL F +E+
Sbjct: 18 KKVKALFWAAKE----------DSLTDGEHHLVTCVLAFFTASDDIVLENLIKHFTQEIH 67
Query: 92 IAEARAFY 99
+ EA FY
Sbjct: 68 LPEAHTFY 75
>Glyma02g25170.1
Length = 53
Score = 64.7 bits (156), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/64 (57%), Positives = 40/64 (62%), Gaps = 12/64 (18%)
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACXXXXXXXXXXXXXRVKGIVRDAVEIEREFVC 241
LKK GLM LTFSNELISRDEG HCD C R+K + +VEIE EFVC
Sbjct: 1 LKKIGLMLRLTFSNELISRDEGFHCDSTC----------LLYRMK--MYGSVEIETEFVC 48
Query: 242 DALP 245
DALP
Sbjct: 49 DALP 52
>Glyma19g22290.1
Length = 43
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 37/48 (77%), Gaps = 5/48 (10%)
Query: 30 MYKKALASFWTAEEVDLSHDLRDWDSLNDGERHFITHVLAFFAASDGI 77
MYKK ASFWTAEE DLR W +L++G HFIT+VLAFFAASDGI
Sbjct: 1 MYKKVEASFWTAEE-----DLRHWATLSNGVCHFITYVLAFFAASDGI 43
>Glyma13g27860.1
Length = 32
Score = 53.1 bits (126), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/24 (95%), Positives = 23/24 (95%)
Query: 181 WLKKRGLMPGLTFSNELISRDEGL 204
WLKKRGLMPGLTFSNELISRDEG
Sbjct: 1 WLKKRGLMPGLTFSNELISRDEGF 24
>Glyma14g27960.1
Length = 25
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/25 (84%), Positives = 23/25 (92%)
Query: 19 MFPIQYPEIWQMYKKALASFWTAEE 43
+FPIQYPEIW+MYKKA ASFWT EE
Sbjct: 1 IFPIQYPEIWEMYKKAEASFWTVEE 25