Miyakogusa Predicted Gene
- Lj0g3v0055339.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0055339.1 Non Chatacterized Hit- tr|Q01DN1|Q01DN1_OSTTA
Putative 50S ribosomal protein L3 (ISS) OS=Ostreococcu,50,0.0002,50S
RIBOSOMAL PROTEIN L3,Ribosomal protein L3, bacterial/organelle-type;
Ribosomal_L3,Ribosomal
prot,NODE_17083_length_867_cov_472.347168.path1.1
(220 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma04g00360.1 366 e-102
Glyma06g00420.1 363 e-101
Glyma12g35360.2 125 3e-29
Glyma12g35360.1 125 3e-29
Glyma13g35150.1 124 7e-29
>Glyma04g00360.1
Length = 263
Score = 366 bits (940), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/220 (81%), Positives = 193/220 (87%)
Query: 1 MEAGVGVMGTKLGMMSYFEENGXXXXXXXXGFKEGNIVTQLKTEATDGYDAVQVGYQRIR 60
MEAG+GVMGTKLGMMSYFE +G GFKEGNIVTQ+KTEATDGYDAVQVGY+R+R
Sbjct: 44 MEAGIGVMGTKLGMMSYFESDGEVVPVTVVGFKEGNIVTQIKTEATDGYDAVQVGYRRVR 103
Query: 61 DRKLTKPELGHLEKVGAIPMRHLQEFRLQSLEGFDLNQRLVFDELFKEGDLVDVSGTTIG 120
DRKLTKPE+GHL+KVGAIPMRHLQEFRLQ+++GFDLNQRLVFDE+FKEGDLVDVSGTTIG
Sbjct: 104 DRKLTKPEIGHLQKVGAIPMRHLQEFRLQAIDGFDLNQRLVFDEIFKEGDLVDVSGTTIG 163
Query: 121 KGFQGGIKRWNFKRGPMSHGSKSHRQLGSIGAGTTPGRVYPGKKMPGRMGGTXXXXXXXX 180
KGFQGGIKR NFKRGPM+HGSKSHRQLGSIGAGTTPGRVY GKKMPGRMGGT
Sbjct: 164 KGFQGGIKRHNFKRGPMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLK 223
Query: 181 XXXXXXXXNVVMIKGALPGKPGNLLRITPAKIVGKNIPKN 220
NVVMIKGA+PGKPGNLLRITPAKIVGKNIPKN
Sbjct: 224 IVKIDKDLNVVMIKGAVPGKPGNLLRITPAKIVGKNIPKN 263
>Glyma06g00420.1
Length = 264
Score = 363 bits (932), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/220 (81%), Positives = 191/220 (86%)
Query: 1 MEAGVGVMGTKLGMMSYFEENGXXXXXXXXGFKEGNIVTQLKTEATDGYDAVQVGYQRIR 60
MEAG+GVMGTKLGMMSYFE +G GFKEGNIVTQ+KTEATDGYDAVQVGY+R+R
Sbjct: 45 MEAGIGVMGTKLGMMSYFESDGEVVPVTVVGFKEGNIVTQIKTEATDGYDAVQVGYRRVR 104
Query: 61 DRKLTKPELGHLEKVGAIPMRHLQEFRLQSLEGFDLNQRLVFDELFKEGDLVDVSGTTIG 120
DRKLTKPE+GHL KVGAIPMRHLQEFRLQ+++GFDLNQRL+FDE FKEGDLVDVSGTTIG
Sbjct: 105 DRKLTKPEMGHLHKVGAIPMRHLQEFRLQAIDGFDLNQRLLFDETFKEGDLVDVSGTTIG 164
Query: 121 KGFQGGIKRWNFKRGPMSHGSKSHRQLGSIGAGTTPGRVYPGKKMPGRMGGTXXXXXXXX 180
KGFQGGIKR NFKRGPM+HGSKSHRQLGSIGAGTTPGRVY GKKMPGRMGGT
Sbjct: 165 KGFQGGIKRHNFKRGPMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLK 224
Query: 181 XXXXXXXXNVVMIKGALPGKPGNLLRITPAKIVGKNIPKN 220
NV+MIKGALPGKPGNLLRITPAKIVGKNIPKN
Sbjct: 225 IVKIDKDLNVLMIKGALPGKPGNLLRITPAKIVGKNIPKN 264
>Glyma12g35360.2
Length = 299
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 112/210 (53%), Gaps = 11/210 (5%)
Query: 6 GVMGTKLGMMSYFEENGXXXXXXXXGFKEGNIVTQLKTEATDGYDAVQVGYQRIRDRKLT 65
G++ K GM + +++ G + + NIV+Q+KT +G+ A+Q+G +D+ LT
Sbjct: 53 GLIAVKCGMSALWDKWGARIPITVL-WVDDNIVSQIKTPEKEGFCALQIGCGHKKDKHLT 111
Query: 66 KPELGHLEKVGAIPMRHLQEFRLQSLE----GFDLNQRLVFDELFKEGDLVDVSGTTIGK 121
KPE+GH G R L+EF + G LN R F G VD+SG T GK
Sbjct: 112 KPEVGHFRAQGVPMKRKLREFPVTEDALLPVGTSLNVR-----HFVPGQFVDISGITKGK 166
Query: 122 GFQGGIKRWNFKRGPMSHG-SKSHRQLGSIGAGTTPGRVYPGKKMPGRMGGTXXXXXXXX 180
GFQG +KR F GP SHG S +HR LGS+G T+ G+V+ KKMPGRMGG
Sbjct: 167 GFQGVMKRHGFSGGPASHGASLAHRTLGSVGHLTSHGKVFKNKKMPGRMGGDQRTVKNVW 226
Query: 181 XXXXXXXXNVVMIKGALPGKPGNLLRITPA 210
N++ +KG +PG GN + I A
Sbjct: 227 VYKIDPARNLMWVKGQVPGATGNFVFIKDA 256
>Glyma12g35360.1
Length = 299
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 112/210 (53%), Gaps = 11/210 (5%)
Query: 6 GVMGTKLGMMSYFEENGXXXXXXXXGFKEGNIVTQLKTEATDGYDAVQVGYQRIRDRKLT 65
G++ K GM + +++ G + + NIV+Q+KT +G+ A+Q+G +D+ LT
Sbjct: 53 GLIAVKCGMSALWDKWGARIPITVL-WVDDNIVSQIKTPEKEGFCALQIGCGHKKDKHLT 111
Query: 66 KPELGHLEKVGAIPMRHLQEFRLQSLE----GFDLNQRLVFDELFKEGDLVDVSGTTIGK 121
KPE+GH G R L+EF + G LN R F G VD+SG T GK
Sbjct: 112 KPEVGHFRAQGVPMKRKLREFPVTEDALLPVGTSLNVR-----HFVPGQFVDISGITKGK 166
Query: 122 GFQGGIKRWNFKRGPMSHG-SKSHRQLGSIGAGTTPGRVYPGKKMPGRMGGTXXXXXXXX 180
GFQG +KR F GP SHG S +HR LGS+G T+ G+V+ KKMPGRMGG
Sbjct: 167 GFQGVMKRHGFSGGPASHGASLAHRTLGSVGHLTSHGKVFKNKKMPGRMGGDQRTVKNVW 226
Query: 181 XXXXXXXXNVVMIKGALPGKPGNLLRITPA 210
N++ +KG +PG GN + I A
Sbjct: 227 VYKIDPARNLMWVKGQVPGATGNFVFIKDA 256
>Glyma13g35150.1
Length = 300
Score = 124 bits (311), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 80/210 (38%), Positives = 112/210 (53%), Gaps = 11/210 (5%)
Query: 6 GVMGTKLGMMSYFEENGXXXXXXXXGFKEGNIVTQLKTEATDGYDAVQVGYQRIRDRKLT 65
G++ K GM + +++ G + + NIV+Q+KT +G+ A+Q+G +D+ LT
Sbjct: 54 GLIAVKCGMSALWDKWGARIPITVL-WVDDNIVSQVKTPEKEGFCALQIGCGHKKDKHLT 112
Query: 66 KPELGHLEKVGAIPMRHLQEFRLQSLE----GFDLNQRLVFDELFKEGDLVDVSGTTIGK 121
KPE+GH G R L+EF + G LN R F G VD++G T GK
Sbjct: 113 KPEVGHFRAQGVPMKRKLKEFPVTEDALLPVGTSLNVR-----HFVPGQYVDITGITKGK 167
Query: 122 GFQGGIKRWNFKRGPMSHG-SKSHRQLGSIGAGTTPGRVYPGKKMPGRMGGTXXXXXXXX 180
GFQG +KR F GP SHG S +HR LGS+G T+ G+V+ KKMPGRMGG
Sbjct: 168 GFQGVMKRHGFSGGPASHGNSLAHRTLGSVGHLTSHGKVFKNKKMPGRMGGDQRTVKNVW 227
Query: 181 XXXXXXXXNVVMIKGALPGKPGNLLRITPA 210
N++ +KG +PG GN + I A
Sbjct: 228 VYKIDPARNLMWVKGQVPGATGNFVFIKDA 257