Miyakogusa Predicted Gene

Lj0g3v0054689.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0054689.1 Non Chatacterized Hit- tr|C5YQ59|C5YQ59_SORBI
Putative uncharacterized protein Sb08g000840
OS=Sorghu,63.64,1e-18,FAMILY NOT NAMED,NULL; TNASE_3,Staphylococcal
nuclease (SNase-like); Staphylococcal nuclease
homolog,NODE_34181_length_1569_cov_65.991074.path1.1
         (335 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g42840.1                                                       582   e-166
Glyma02g42840.2                                                       546   e-155
Glyma1546s00210.1                                                     152   7e-37
Glyma14g05930.1                                                       120   3e-27
Glyma14g05940.1                                                       106   4e-23
Glyma14g40070.1                                                        72   7e-13
Glyma14g40050.1                                                        69   6e-12

>Glyma02g42840.1 
          Length = 335

 Score =  582 bits (1501), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 275/334 (82%), Positives = 297/334 (88%)

Query: 1   MGNALRFLYSNCCKPTAAGDSDSLGPHGVSSATVGVSALAHDLFHFENTSQVPEGLSKHV 60
           MGNALRFLYS+CCKPTAAGDS+SLGPHGVSSATVGVS LAHDLFHF+ TSQVPEGLSKHV
Sbjct: 1   MGNALRFLYSHCCKPTAAGDSESLGPHGVSSATVGVSTLAHDLFHFDITSQVPEGLSKHV 60

Query: 61  KSSKKAQANWYRKLVDAWKEAKPPPRTPEEAARLVIQTLKRHQKADVEGLLTFYGLPLPH 120
            SSKKAQANWYRKLVDAWKEAKPPP+TPEEAARLVIQTL+RHQKADVEGLL FYGLPLPH
Sbjct: 61  VSSKKAQANWYRKLVDAWKEAKPPPKTPEEAARLVIQTLRRHQKADVEGLLAFYGLPLPH 120

Query: 121 TLVEVVAQPPTSLPHGVQYEMHTLPVDAKAVADGDTVTVYVSTADPRESSTVPANIHXXX 180
           TLV+   QP +SLP GVQ+EMHTLPVDAKAVADGDT+TVYVST DPRES+ VP N+H   
Sbjct: 121 TLVQGTTQPLSSLPDGVQFEMHTLPVDAKAVADGDTITVYVSTTDPRESAFVPGNVHAAA 180

Query: 181 XXXXXXXXXXXXXXXDALHKQIIDAGYRMLSFQNEEVLAKKYRIRLRGIDAPESAMPYGK 240
                          DALHKQIID+GYR++  QNEE+LAKKYRIRLRGIDAPESAMPYGK
Sbjct: 181 VRRSEARARRNFTEADALHKQIIDSGYRVIPVQNEEILAKKYRIRLRGIDAPESAMPYGK 240

Query: 241 EAKMELTKVLQGKSLRVLIYGEDRYGRCVGDIYCNGIFVQELMLKKGLAWHYSAYDKRPE 300
           EAK ELTK++QGK LR+L+Y EDRYGR VGDIYCNGIFVQE+MLKKGLAWHY AYDKRPE
Sbjct: 241 EAKTELTKIVQGKPLRILVYEEDRYGRSVGDIYCNGIFVQEMMLKKGLAWHYVAYDKRPE 300

Query: 301 LETWEKEARAKRVGLWASKNPEKPWDWRKDRREA 334
           LETWEK+ARAKRVGLWASKNPEKPW+WRKDRREA
Sbjct: 301 LETWEKQARAKRVGLWASKNPEKPWEWRKDRREA 334


>Glyma02g42840.2 
          Length = 323

 Score =  546 bits (1406), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 263/334 (78%), Positives = 285/334 (85%), Gaps = 12/334 (3%)

Query: 1   MGNALRFLYSNCCKPTAAGDSDSLGPHGVSSATVGVSALAHDLFHFENTSQVPEGLSKHV 60
           MGNALRFLYS+CCKPTAAGDS+SLGPHGVSSATVGVS LAHDLFHF+ TSQVPEGLSKHV
Sbjct: 1   MGNALRFLYSHCCKPTAAGDSESLGPHGVSSATVGVSTLAHDLFHFDITSQVPEGLSKHV 60

Query: 61  KSSKKAQANWYRKLVDAWKEAKPPPRTPEEAARLVIQTLKRHQKADVEGLLTFYGLPLPH 120
            SSKKAQANWYRKLVDAWKEAKPPP+TPEEAARLVIQTL+RHQKADVEGLL FYGLPLPH
Sbjct: 61  VSSKKAQANWYRKLVDAWKEAKPPPKTPEEAARLVIQTLRRHQKADVEGLLAFYGLPLPH 120

Query: 121 TLVEVVAQPPTSLPHGVQYEMHTLPVDAKAVADGDTVTVYVSTADPRESSTVPANIHXXX 180
           TLV+   QP +SLP GVQ+EMHTLPVDAKAVADGDT+TVYVST DPRES+ VP N+H   
Sbjct: 121 TLVQGTTQPLSSLPDGVQFEMHTLPVDAKAVADGDTITVYVSTTDPRESAFVPGNVHAAA 180

Query: 181 XXXXXXXXXXXXXXXDALHKQIIDAGYRMLSFQNEEVLAKKYRIRLRGIDAPESAMPYGK 240
                          DALHKQIID+GYR++  QNEE+LAKKYRIRLRGIDAPESAMPYGK
Sbjct: 181 VRRSEARARRNFTEADALHKQIIDSGYRVIPVQNEEILAKKYRIRLRGIDAPESAMPYGK 240

Query: 241 EAKMELTKVLQGKSLRVLIYGEDRYGRCVGDIYCNGIFVQELMLKKGLAWHYSAYDKRPE 300
           EAK ELTK++QGK LR+L+Y EDRYGR             E+MLKKGLAWHY AYDKRPE
Sbjct: 241 EAKTELTKIVQGKPLRILVYEEDRYGRS------------EMMLKKGLAWHYVAYDKRPE 288

Query: 301 LETWEKEARAKRVGLWASKNPEKPWDWRKDRREA 334
           LETWEK+ARAKRVGLWASKNPEKPW+WRKDRREA
Sbjct: 289 LETWEKQARAKRVGLWASKNPEKPWEWRKDRREA 322


>Glyma1546s00210.1 
          Length = 208

 Score =  152 bits (383), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 112/258 (43%), Positives = 136/258 (52%), Gaps = 63/258 (24%)

Query: 71  YRKLVDAWKEAKPPPRTPEEAARLVIQTLKRHQKADVEGLLTFYGLPLPHTLVEVVAQPP 130
           YRKLVDAWKEAKPPP+TPEEAARLVIQTLKRHQKADVEG + F    L HT   +  + P
Sbjct: 1   YRKLVDAWKEAKPPPKTPEEAARLVIQTLKRHQKADVEGFMVF----LYHT--PLFKELP 54

Query: 131 TSLPHGVQYEMHTLPVDAKAVA-DG--DTVTVYVSTADPRESSTVPANIHXXXXXXXXXX 187
             L H    E +      + +A DG  D +T ++                          
Sbjct: 55  NPL-HPSLMEFNLKCTHCRILAEDGIVDDMTRFIIN------------------------ 89

Query: 188 XXXXXXXXDALHKQIIDAGYRMLSFQNEEVLAKKYRIRLRGIDAPESAMPYGKEAKMELT 247
                     L   IID GYR     N+E+L    R + RGIDA ESAM YGK AK ELT
Sbjct: 90  ----------LSGTIIDPGYR--CNPNQELLMNS-RNKNRGIDASESAMSYGKTAKTELT 136

Query: 248 KVLQG-KSLRVLIYGEDRYGRCVGDIYCNGIFVQELMLKKGLAWHYSAYDKRPE---LET 303
           K++QG K  RVL+YGEDRY            F+  +MLKKGLA HY+ YDKR +   L+ 
Sbjct: 137 KIVQGSKPSRVLVYGEDRY------------FLILMMLKKGLACHYTFYDKRLQSAILKL 184

Query: 304 WEKEARAKRVGLWASKNP 321
            EK +++K      S  P
Sbjct: 185 MEKTSQSKAFSFGLSPFP 202


>Glyma14g05930.1 
          Length = 225

 Score =  120 bits (300), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 67/133 (50%), Positives = 83/133 (62%), Gaps = 26/133 (19%)

Query: 216 EVLAKKYRIRLRGIDAPESAMPYGKEAKMELTKVLQGKSLRVLIYGEDRYGRCVGDIYCN 275
           E+LA+KYRI+LR     +S MPYGK AK ELTK++Q K  RVL+Y EDRYGR VGDIY N
Sbjct: 104 EILARKYRIQLR-----KSVMPYGKAAKTELTKIVQDKPFRVLVYREDRYGRSVGDIYYN 158

Query: 276 GIFVQELMLKKGLAWHYSAYDKRPELET--------------WEKEARAKRVGLWASKNP 321
            I   E    + +        KRP+LET               E +   +R+GLWASKNP
Sbjct: 159 CIIFVEHDTTQPI-------KKRPKLETASNPCSGPFTIFSNGENKLEPERLGLWASKNP 211

Query: 322 EKPWDWRKDRREA 334
           EKPW+WRK++REA
Sbjct: 212 EKPWEWRKNKREA 224


>Glyma14g05940.1 
          Length = 150

 Score =  106 bits (264), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 55/95 (57%), Positives = 66/95 (69%), Gaps = 5/95 (5%)

Query: 71  YRKLVDAWKEAKPPPRTPEEAARLVIQTLKRHQKADVEGLLTFYGLPLPHT-LVEVVAQP 129
           YRKLVDAWKEAKPPP+TP+EAARLVIQTLKRHQKADVEG + F    L HT L +  AQP
Sbjct: 1   YRKLVDAWKEAKPPPKTPDEAARLVIQTLKRHQKADVEGFMVF----LYHTPLFKGTAQP 56

Query: 130 PTSLPHGVQYEMHTLPVDAKAVADGDTVTVYVSTA 164
           P+S P+GVQ +    P   + +   ++   Y  TA
Sbjct: 57  PSSFPNGVQLKCTHCPNKNRGIDASESAMSYGKTA 91



 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/89 (44%), Positives = 45/89 (50%), Gaps = 28/89 (31%)

Query: 227 RGIDAPESAMPYGKEAKMELTKVLQGKSLRVLIYGEDRYGRCVGDIYCNG-IFVQEL--- 282
           RGIDA ESAM YGK AK ELTK+                        CN  IFVQ L   
Sbjct: 76  RGIDASESAMSYGKTAKTELTKI------------------------CNCIIFVQFLILM 111

Query: 283 MLKKGLAWHYSAYDKRPELETWEKEARAK 311
           MLKKGLA HY  YDKR   +   K +++K
Sbjct: 112 MLKKGLACHYIVYDKRGIQQLMGKTSQSK 140


>Glyma14g40070.1 
          Length = 94

 Score = 72.4 bits (176), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 45/112 (40%), Positives = 61/112 (54%), Gaps = 18/112 (16%)

Query: 137 VQYEMHTLPVDAKAVADGDTVTVYVSTADPRESSTVPANIHXXXXXXXXXXXXXXXXXXD 196
           +Q E HTLPVDAK V DGD++TVYVS  DPRES+ +  ++                   D
Sbjct: 1   IQCEKHTLPVDAKTVEDGDSLTVYVSIVDPRESALILVHVF---AQRLDARKQRNFIEAD 57

Query: 197 ALHKQIIDAGYRMLSFQNEEVLAKKYRIRLRGIDAPESAMPYGKEAKMELTK 248
           ALH+QIID+G+R+             +I+LR  D P    PY  E +++LTK
Sbjct: 58  ALHRQIIDSGHRL-----------PIKIKLRNSDTP---FPYITE-EIQLTK 94


>Glyma14g40050.1 
          Length = 118

 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 70/169 (41%), Gaps = 51/169 (30%)

Query: 111 LTFYGLPLPHTLVEVVAQPPTSLPHGVQYEMHTLPVDAKAVADGDTVTVYVSTADPRESS 170
           LTFY + L HTLV           H + + + +  V+AKAV D D++TVYVS  DPR+S+
Sbjct: 1   LTFYDISLLHTLV-----------HAITHSLFSWLVNAKAVTDNDSLTVYVSIVDPRKSA 49

Query: 171 TVPANIHXXXXXXXXXXXXXXXXXXDALHKQIIDAGYRMLSFQNEEVLAKKYRIRLRGID 230
            +P ++                   +ALH+ IID+                       ID
Sbjct: 50  LIPVHVLAACRRRLDAPKQRNFIEANALHRHIIDSW---------------------EID 88

Query: 231 APESAMPYGKEAKMELTKVLQGKSLRVLIYGEDRYGRCVGDIYCNGIFV 279
           A                   Q   L + IY +D Y   VGD+YC+ IFV
Sbjct: 89  A-------------------QDIYLWIRIYEKDNYDHFVGDVYCHVIFV 118