Miyakogusa Predicted Gene

Lj0g3v0054489.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0054489.1 tr|B9NYQ5|B9NYQ5_PROMR NAD(P)H-quinone
oxidoreductase subunit N OS=Prochlorococcus marinus str. MIT
,39.29,8e-19,NdhN,NAD(P)H-quinone oxidoreductase, subunit
N,CUFF.2415.1
         (221 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g05640.1                                                       363   e-101
Glyma11g31620.1                                                       354   3e-98

>Glyma18g05640.1 
          Length = 229

 Score =  363 bits (933), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 182/231 (78%), Positives = 193/231 (83%), Gaps = 12/231 (5%)

Query: 1   MSAATSLGYGGPTCF---HVTKRQQQTRN-------NTIGMMTGWGGRRHYETSKKDVVG 50
           MS+  SLGYG PTCF   H TK+QQ  RN       N++ +M GW GR     +    VG
Sbjct: 1   MSSTASLGYGAPTCFNNVHHTKKQQAMRNSFLSNKHNSVRVMKGWRGRHGNTNNTSKRVG 60

Query: 51  VVRCSGVGLGDFIGGDLLKPDLGRWLSDVEEHKALAIYSPHEGGYEGRYLSRLRRQGYYF 110
           +V+C G  LGDFIGGDL+K DLGRWLSDVEEHKALAIY PHEGGYEGRYLSRL+RQGYYF
Sbjct: 61  IVQCRG--LGDFIGGDLIKFDLGRWLSDVEEHKALAIYPPHEGGYEGRYLSRLKRQGYYF 118

Query: 111 LDLSARGLGDPETTLTKIHPVCPPHVGKQPIARWYFPPEVDYRLEALPPNAKGLVVCIIE 170
           LDL+ARGLGDPETTLTKIHPVCPPHVGKQPIARWYFPPEVDYRLEALPPNAKGLVV IIE
Sbjct: 119 LDLTARGLGDPETTLTKIHPVCPPHVGKQPIARWYFPPEVDYRLEALPPNAKGLVVWIIE 178

Query: 171 AKVLSKAELQFLALLPTLRPNVRVIAECGNWRKFMWKPLKEIAGLTAITEG 221
           AKVLSKAELQFLALLPTLRPNVRVIAECGNWRKFMWKPLKEIAGLT   E 
Sbjct: 179 AKVLSKAELQFLALLPTLRPNVRVIAECGNWRKFMWKPLKEIAGLTTSEEA 229


>Glyma11g31620.1 
          Length = 228

 Score =  354 bits (909), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 183/231 (79%), Positives = 195/231 (84%), Gaps = 13/231 (5%)

Query: 1   MSAATSLGYGGPTCF----HVTKRQQ----QTRNNTIGMMTGWGGR--RHYETSKKDVVG 50
           MS+  SLGYGGPTCF    H T R      +  N+ + ++ GW GR   +  TSK+ VVG
Sbjct: 1   MSSTASLGYGGPTCFNNVVHQTMRNSFIATKQHNSVMRVVKGWRGRHGNNCNTSKR-VVG 59

Query: 51  VVRCSGVGLGDFIGGDLLKPDLGRWLSDVEEHKALAIYSPHEGGYEGRYLSRLRRQGYYF 110
           VV+C G  LGDFIGGDL+K DLGRWLSDVEEHKALAIY PHEGGYEGRYLSRL+RQGYYF
Sbjct: 60  VVQCRG--LGDFIGGDLIKFDLGRWLSDVEEHKALAIYPPHEGGYEGRYLSRLKRQGYYF 117

Query: 111 LDLSARGLGDPETTLTKIHPVCPPHVGKQPIARWYFPPEVDYRLEALPPNAKGLVVCIIE 170
           LDL+ARGLGDPETTLTKIHPVCPPHVGKQPIARWYFPPEVDYRLEALPPNAKGLVV IIE
Sbjct: 118 LDLTARGLGDPETTLTKIHPVCPPHVGKQPIARWYFPPEVDYRLEALPPNAKGLVVWIIE 177

Query: 171 AKVLSKAELQFLALLPTLRPNVRVIAECGNWRKFMWKPLKEIAGLTAITEG 221
           AKVLSKAELQFLALLPTLRPNVRVIAECGNWRKFMWKPLKEIAGLT   E 
Sbjct: 178 AKVLSKAELQFLALLPTLRPNVRVIAECGNWRKFMWKPLKEIAGLTTSEEA 228