Miyakogusa Predicted Gene
- Lj0g3v0054479.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0054479.1 Non Chatacterized Hit- tr|D8U478|D8U478_VOLCA
Putative uncharacterized protein OS=Volvox carteri
GN=,41.27,1e-18,seg,NULL; Ycf54,Uncharacterised protein family
Ycf54,CUFF.2408.1
(236 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma11g31660.1 253 1e-67
Glyma18g05620.1 227 6e-60
Glyma11g31660.2 181 8e-46
>Glyma11g31660.1
Length = 234
Score = 253 bits (646), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 137/236 (58%), Positives = 148/236 (62%), Gaps = 5/236 (2%)
Query: 2 MLGVATLTLGXXXXXXXX-XXXXHPTTLASVNALTGVKRHSLSYRTHSLPMNLVSPTNQN 60
MLGVATLTLG H TTLAS N G +RHS+S RTHSLPM+LVSPTNQ+
Sbjct: 1 MLGVATLTLGSSTTMVAQNHAQQHATTLASAN---GNRRHSVSNRTHSLPMSLVSPTNQS 57
Query: 61 VTLFSSFKEXXXXXXXXXXXXXXXDSDNLSSSDPATKKEANKYYFVIANAKFMLDXXXXX 120
T SSFKE DSD L SSDP TK EA KYYF++ANAKFMLD
Sbjct: 58 FTFLSSFKEPTHARPFTTAVASV-DSDQLDSSDPPTKNEATKYYFLVANAKFMLDEEEHF 116
Query: 121 XXXXXXXXXXXXXXKMEQDFWLVIEPKFLDRFPGITKRLGRPAVALVSTNGPWITYMKLR 180
EQDFWLVIEPKFLD+F ITKRL RPAVALVSTNGPWIT+MKLR
Sbjct: 117 QEQLFERLRLFGERNQEQDFWLVIEPKFLDKFSNITKRLKRPAVALVSTNGPWITFMKLR 176
Query: 181 LDRVLXXXXXXXXXXXXXXXNPTNLDFGKPDKWVAPYPKYESGWWETFLLPAQKEV 236
LDRVL NPT+L F KP+KWVAPYPKYESGWW+ FL P Q EV
Sbjct: 177 LDRVLSDCFEAESLEEALAFNPTDLKFEKPEKWVAPYPKYESGWWKPFLPPVQTEV 232
>Glyma18g05620.1
Length = 234
Score = 227 bits (579), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 121/213 (56%), Positives = 136/213 (63%), Gaps = 4/213 (1%)
Query: 24 HPTTLASVNALTGVKRHSLSYRTHSLPMNLVSPTNQNVTLFSSFKEXXXXXXXXXXXXXX 83
H TTLAS N G +R S+S RTH LPM+LVS T+Q+ + SSFKE
Sbjct: 24 HATTLASAN---GNRRDSVSNRTHPLPMSLVSSTDQSFSFLSSFKEPTHARPFTTAVASV 80
Query: 84 XDSDNLSSSDPATKKEANKYYFVIANAKFMLDXXXXXXXXXXXXXXXXXXXKMEQDFWLV 143
DSD L+SSDP TK EA+KYYF++ANAKFMLD EQDFWLV
Sbjct: 81 -DSDKLNSSDPPTKNEASKYYFLVANAKFMLDEEEHFQEQLFERLRLFGERNQEQDFWLV 139
Query: 144 IEPKFLDRFPGITKRLGRPAVALVSTNGPWITYMKLRLDRVLXXXXXXXXXXXXXXXNPT 203
IEPKFLD+FP ITKRL RPAVALVSTNGPWI +MKLRLDRVL NPT
Sbjct: 140 IEPKFLDKFPNITKRLKRPAVALVSTNGPWIRFMKLRLDRVLSDSFEAESLEEALAFNPT 199
Query: 204 NLDFGKPDKWVAPYPKYESGWWETFLLPAQKEV 236
+L F KP+KWVAPYPKYE GWW+ FL P Q EV
Sbjct: 200 DLKFEKPEKWVAPYPKYEFGWWKPFLPPVQTEV 232
>Glyma11g31660.2
Length = 171
Score = 181 bits (458), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 101/175 (57%), Positives = 108/175 (61%), Gaps = 5/175 (2%)
Query: 2 MLGVATLTLGXXXXXXXX-XXXXHPTTLASVNALTGVKRHSLSYRTHSLPMNLVSPTNQN 60
MLGVATLTLG H TTLAS N G +RHS+S RTHSLPM+LVSPTNQ+
Sbjct: 1 MLGVATLTLGSSTTMVAQNHAQQHATTLASAN---GNRRHSVSNRTHSLPMSLVSPTNQS 57
Query: 61 VTLFSSFKEXXXXXXXXXXXXXXXDSDNLSSSDPATKKEANKYYFVIANAKFMLDXXXXX 120
T SSFKE DSD L SSDP TK EA KYYF++ANAKFMLD
Sbjct: 58 FTFLSSFKEPTHARPFTTAVASV-DSDQLDSSDPPTKNEATKYYFLVANAKFMLDEEEHF 116
Query: 121 XXXXXXXXXXXXXXKMEQDFWLVIEPKFLDRFPGITKRLGRPAVALVSTNGPWIT 175
EQDFWLVIEPKFLD+F ITKRL RPAVALVSTNGPWIT
Sbjct: 117 QEQLFERLRLFGERNQEQDFWLVIEPKFLDKFSNITKRLKRPAVALVSTNGPWIT 171